RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.34■□□□□ 0.05
GGPS1-203ENST00000391855 ZCCHC17Q9NP64 241 aaKnown RBP15.34■□□□□ 0.05
GGPS1-203ENST00000391855 PICK1Q9NRD5 415 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 ZNF532Q9HCE3 1301 aa15.33■□□□□ 0.05
GGPS1-203ENST00000391855 PCNTO95613 3336 aa15.33■□□□□ 0.05
GGPS1-203ENST00000391855 DOCK1Q14185 1865 aa15.33■□□□□ 0.04
GGPS1-203ENST00000391855 ADD2P35612 726 aa15.33■□□□□ 0.04
GGPS1-203ENST00000391855 USP5P45974 858 aa15.33■□□□□ 0.04
GGPS1-203ENST00000391855 DYNLL1P63167 89 aaKnown RBP15.33■□□□□ 0.04
GGPS1-203ENST00000391855 UBE3CQ15386 1083 aa15.33■□□□□ 0.04
GGPS1-203ENST00000391855 RIOK1Q9BRS2 568 aaKnown RBP15.33■□□□□ 0.04
GGPS1-203ENST00000391855 TBC1D2Q9BYX2 928 aa15.33■□□□□ 0.04
GGPS1-203ENST00000391855 CRNKL1Q9BZJ0 848 aaKnown RBP15.33■□□□□ 0.04
GGPS1-203ENST00000391855 RWDD1Q9H446 243 aaPredicted RBP15.33■□□□□ 0.04
GGPS1-203ENST00000391855 KCNH4Q9UQ05 1017 aa15.33■□□□□ 0.04
GGPS1-203ENST00000391855 SUPT16HQ9Y5B9 1047 aaKnown RBP15.33■□□□□ 0.04
GGPS1-203ENST00000391855 MYH7P12883 1935 aa15.32■□□□□ 0.04
GGPS1-203ENST00000391855 TCRBV5S4A2TA0A5A2 114 aa15.32■□□□□ 0.04
GGPS1-203ENST00000391855 IGF2BP3O00425 579 aaKnown RBP eCLIP15.32■□□□□ 0.04
GGPS1-203ENST00000391855 IRF6O14896 467 aa15.32■□□□□ 0.04
GGPS1-203ENST00000391855 GLRX3O76003 335 aaKnown RBP15.32■□□□□ 0.04
GGPS1-203ENST00000391855 LRRFIP1Q32MZ4 808 aaKnown RBP15.32■□□□□ 0.04
GGPS1-203ENST00000391855 FOXP4Q8IVH2 680 aaPredicted RBP15.32■□□□□ 0.04
GGPS1-203ENST00000391855 BRI3BPQ8WY22 251 aa15.32■□□□□ 0.04
GGPS1-203ENST00000391855 EDC3Q96F86 508 aaKnown RBP15.32■□□□□ 0.04
GGPS1-203ENST00000391855 TRIM34Q9BYJ4 488 aa15.32■□□□□ 0.04
GGPS1-203ENST00000391855 GINM1Q9NU53 330 aa15.32■□□□□ 0.04
GGPS1-203ENST00000391855 CXCL11O14625 94 aa15.31■□□□□ 0.04
GGPS1-203ENST00000391855 TTC6Q86TZ1 520 aa15.31■□□□□ 0.04
GGPS1-203ENST00000391855 METTL16Q86W50 562 aaKnown RBP15.31■□□□□ 0.04
GGPS1-203ENST00000391855 CRACR2BQ8N4Y2 399 aaPredicted RBP15.31■□□□□ 0.04
GGPS1-203ENST00000391855 KBTBD3Q8NAB2 608 aa15.31■□□□□ 0.04
GGPS1-203ENST00000391855 EXOC6Q8TAG9 804 aa15.31■□□□□ 0.04
GGPS1-203ENST00000391855 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
GGPS1-203ENST00000391855 GPR25O00155 361 aa15.3■□□□□ 0.04
GGPS1-203ENST00000391855 TBC1D8O95759 1140 aa15.3■□□□□ 0.04
GGPS1-203ENST00000391855 MX1P20591 662 aa15.3■□□□□ 0.04
GGPS1-203ENST00000391855 ANKRD45Q5TZF3 282 aa15.3■□□□□ 0.04
GGPS1-203ENST00000391855 EHD4Q9H223 541 aa15.3■□□□□ 0.04
GGPS1-203ENST00000391855 DDX60LQ5H9U9 1706 aaKnown RBP15.3■□□□□ 0.04
GGPS1-203ENST00000391855 SIPA1L1O43166 1804 aa15.3■□□□□ 0.04
GGPS1-203ENST00000391855 NAV1Q8NEY1 1877 aa15.3■□□□□ 0.04
GGPS1-203ENST00000391855 ZFYP08048 801 aaPredicted RBP15.29■□□□□ 0.04
GGPS1-203ENST00000391855 PTPRAP18433 802 aa15.29■□□□□ 0.04
GGPS1-203ENST00000391855 IFFO2Q5TF58 517 aa15.29■□□□□ 0.04
GGPS1-203ENST00000391855 SMC5Q8IY18 1101 aa15.29■□□□□ 0.04
GGPS1-203ENST00000391855 PTPN18Q99952 460 aa15.29■□□□□ 0.04
GGPS1-203ENST00000391855 PALD1Q9ULE6 856 aa15.29■□□□□ 0.04
GGPS1-203ENST00000391855 MYH1P12882 1939 aa15.29■□□□□ 0.04
GGPS1-203ENST00000391855 CASP8AP2Q9UKL3 1982 aa15.29■□□□□ 0.04
GGPS1-203ENST00000391855 SALL3Q9BXA9 1300 aa15.28■□□□□ 0.04
GGPS1-203ENST00000391855 FAM196BA6NMK8 535 aa15.28■□□□□ 0.04
GGPS1-203ENST00000391855 FKTNO75072 461 aa15.28■□□□□ 0.04
GGPS1-203ENST00000391855 CAP2P40123 477 aa15.28■□□□□ 0.04
GGPS1-203ENST00000391855 TAF1CQ15572 869 aaPredicted RBP15.28■□□□□ 0.04
GGPS1-203ENST00000391855 ANKRD23Q86SG2 305 aa15.28■□□□□ 0.04
GGPS1-203ENST00000391855 PI4K2BQ8TCG2 481 aa15.28■□□□□ 0.04
GGPS1-203ENST00000391855 ZFYVE28Q9HCC9 887 aa15.28■□□□□ 0.04
GGPS1-203ENST00000391855 ZHX2Q9Y6X8 837 aa15.28■□□□□ 0.04
GGPS1-203ENST00000391855 MBD4O95243 580 aa15.27■□□□□ 0.04
GGPS1-203ENST00000391855 ASNSP08243 561 aa15.27■□□□□ 0.04
GGPS1-203ENST00000391855 CRHR2Q13324 411 aa15.27■□□□□ 0.04
GGPS1-203ENST00000391855 FASTKD5Q7L8L6 764 aaKnown RBP15.27■□□□□ 0.04
GGPS1-203ENST00000391855 CTU1Q7Z7A3 348 aaKnown RBP15.27■□□□□ 0.04
GGPS1-203ENST00000391855 LCORLQ8N3X6 602 aa15.27■□□□□ 0.04
GGPS1-203ENST00000391855 ZNF296Q8WUU4 475 aaPredicted RBP15.27■□□□□ 0.04
GGPS1-203ENST00000391855 DDRGK1Q96HY6 314 aa15.27■□□□□ 0.04
GGPS1-203ENST00000391855 AS3MTQ9HBK9 375 aa15.27■□□□□ 0.04
GGPS1-203ENST00000391855 ATP8A2Q9NTI2 1148 aa15.27■□□□□ 0.04
GGPS1-203ENST00000391855 SAP30BPQ9UHR5 308 aaKnown RBP15.27■□□□□ 0.04
GGPS1-203ENST00000391855 SERPINB13Q9UIV8 391 aa15.27■□□□□ 0.04
GGPS1-203ENST00000391855 ATAD5Q96QE3 1844 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 A0A0G2JLL6 359 aaPredicted RBP15.26■□□□□ 0.03
GGPS1-203ENST00000391855 BTBD19C9JJ37 291 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 TSHZ3Q63HK5 1081 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 PRRT2Q7Z6L0 340 aaPredicted RBP15.26■□□□□ 0.03
GGPS1-203ENST00000391855 AMOTL1Q8IY63 956 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 FAM43AQ8N2R8 423 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 APPBP2Q92624 585 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 DNAJC18Q9H819 358 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 ARMT1Q9H993 441 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 STAP2Q9UGK3 403 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 AFG3L2Q9Y4W6 797 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 USP17L5A8MUK1 530 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 POLR3DP05423 398 aaPredicted RBP15.26■□□□□ 0.03
GGPS1-203ENST00000391855 SLURP2P0DP57 97 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 DGKZQ13574 1117 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 OTUD7AQ8TE49 926 aaPredicted RBP15.26■□□□□ 0.03
GGPS1-203ENST00000391855 ERO1AQ96HE7 468 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 DCP1AQ9NPI6 582 aaPredicted RBP15.26■□□□□ 0.03
GGPS1-203ENST00000391855 MCM9Q9NXL9 1143 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 SLC45A1Q9Y2W3 748 aa15.26■□□□□ 0.03
GGPS1-203ENST00000391855 RNF113AO15541 343 aaKnown RBP15.25■□□□□ 0.03
GGPS1-203ENST00000391855 PKN2Q16513 984 aaKnown RBP15.25■□□□□ 0.03
GGPS1-203ENST00000391855 TICAM2Q86XR7 235 aa15.25■□□□□ 0.03
GGPS1-203ENST00000391855 ZNF280CQ8ND82 737 aa15.25■□□□□ 0.03
GGPS1-203ENST00000391855 SDR42E1Q8WUS8 393 aa15.25■□□□□ 0.03
GGPS1-203ENST00000391855 PARK7Q99497 189 aaKnown RBP15.25■□□□□ 0.03
GGPS1-203ENST00000391855 MCOLN1Q9GZU1 580 aa15.25■□□□□ 0.03
GGPS1-203ENST00000391855 PHIPQ8WWQ0 1821 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 220.7 ms