RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 GNAT3A8MTJ3 354 aa3.64□□□□□ -1.83
RNU6-239P-201ENST00000390990 PRR33A8MZF0 331 aa3.64□□□□□ -1.83
RNU6-239P-201ENST00000390990 ERVK-24P63145 666 aa3.64□□□□□ -1.83
RNU6-239P-201ENST00000390990 DBX2Q6ZNG2 339 aa3.64□□□□□ -1.83
RNU6-239P-201ENST00000390990 GGNQ86UU5 652 aa3.64□□□□□ -1.83
RNU6-239P-201ENST00000390990 NPAS4Q8IUM7 802 aa3.64□□□□□ -1.83
RNU6-239P-201ENST00000390990 ABHD4Q8TB40 342 aa3.64□□□□□ -1.83
RNU6-239P-201ENST00000390990 ZCCHC4Q9H5U6 513 aa3.64□□□□□ -1.83
RNU6-239P-201ENST00000390990 NPHS2Q9NP85 383 aa3.64□□□□□ -1.83
RNU6-239P-201ENST00000390990 ERVFC1P60507 584 aa3.63□□□□□ -1.83
RNU6-239P-201ENST00000390990 PPM1JQ5JR12 505 aa3.63□□□□□ -1.83
RNU6-239P-201ENST00000390990 CDKAL1Q5VV42 579 aa3.63□□□□□ -1.83
RNU6-239P-201ENST00000390990 PRPF40BQ6NWY9 871 aaKnown RBP3.63□□□□□ -1.83
RNU6-239P-201ENST00000390990 SLC26A8Q96RN1 970 aa3.63□□□□□ -1.83
RNU6-239P-201ENST00000390990 SSFA2P28290 1259 aa3.62□□□□□ -1.83
RNU6-239P-201ENST00000390990 FKBP4Q02790 459 aaKnown RBP eCLIP3.62□□□□□ -1.83
RNU6-239P-201ENST00000390990 ORC1Q13415 861 aa3.62□□□□□ -1.83
RNU6-239P-201ENST00000390990 MPRIPQ6WCQ1 1025 aa3.62□□□□□ -1.83
RNU6-239P-201ENST00000390990 TTC6Q86TZ1 520 aa3.62□□□□□ -1.83
RNU6-239P-201ENST00000390990 KCNC2Q96PR1 638 aa3.62□□□□□ -1.83
RNU6-239P-201ENST00000390990 ALPK1Q96QP1 1244 aa3.62□□□□□ -1.83
RNU6-239P-201ENST00000390990 FOXQ1Q9C009 403 aa3.62□□□□□ -1.83
RNU6-239P-201ENST00000390990 ANO2Q9NQ90 1003 aa3.62□□□□□ -1.83
RNU6-239P-201ENST00000390990 PRDM5Q9NQX1 630 aaPredicted RBP3.62□□□□□ -1.83
RNU6-239P-201ENST00000390990 CSADQ9Y600 493 aa3.62□□□□□ -1.83
RNU6-239P-201ENST00000390990 DNAJC25-GNG10A0A024R161 153 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 FAM155AB1AL88 458 aaPredicted RBP3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 H3BS24 57 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 SRFP11831 508 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 SYN1P17600 705 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 NFKB2Q00653 900 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 SKOR2Q2VWA4 1001 aaPredicted RBP3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 RALGPS1Q5JS13 557 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 MAP1SQ66K74 1059 aaPredicted RBP3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 GPBAR1Q8TDU6 330 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 PBXIP1Q96AQ6 731 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 DNAJC25Q9H1X3 360 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 SLAMF8Q9P0V8 285 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 MAPK8IP1Q9UQF2 711 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 ST14Q9Y5Y6 855 aa3.61□□□□□ -1.83
RNU6-239P-201ENST00000390990 TRIM13O60858 407 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 CPNE3O75131 537 aaKnown RBP3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 SLITRK5O94991 958 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 ARNTP27540 789 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 DLG4P78352 724 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 FGD1P98174 961 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 HNRNPUQ00839 825 aaKnown RBP eCLIP3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 RING1Q06587 406 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 ZNF211Q13398 564 aaPredicted RBP3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 SF3B2Q13435 895 aaKnown RBP3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 GRM2Q14416 872 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 NFIXQ14938 502 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 C12orf40Q86WS4 652 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 SULF2Q8IWU5 870 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 MARCH10Q8NA82 808 aaPredicted RBP3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 BAHD1Q8TBE0 780 aaPredicted RBP3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 MYLIPQ8WY64 445 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 CCDC74AQ96AQ1 378 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 TMEM39AQ9NV64 488 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 CACNA2D2Q9NY47 1150 aa3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 GPN3Q9UHW5 284 aaPredicted RBP3.6□□□□□ -1.83
RNU6-239P-201ENST00000390990 MYOCOSA0A1B0GUC4 107 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 DCDC2CA8MYV0 355 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 GADD45BO75293 160 aaPredicted RBP3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 PRKCSHP14314 528 aaPredicted RBP3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 RAC2P15153 192 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 TRHRP34981 398 aaPredicted RBP3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 HK2P52789 917 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 PPP2R3AQ06190 1150 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 ZNF252P-AS1Q0IIN9 211 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 ARMCX6Q7L4S7 300 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 PRRT2Q7Z6L0 340 aaPredicted RBP3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 MFSD4AQ8N468 514 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 UBE2FQ969M7 185 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 CCDC120Q96HB5 630 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 MCOLN1Q9GZU1 580 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 CAPN6Q9Y6Q1 641 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 ADAMTS20P59510 1910 aa3.59□□□□□ -1.83
RNU6-239P-201ENST00000390990 SLC24A1O60721 1099 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 ABL1P00519 1130 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 HPXP02790 462 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 NEFLP07196 543 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 FCGRTP55899 365 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 ZBTB37Q5TC79 503 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 PHLDB3Q6NSJ2 640 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 DTHD1Q6ZMT9 781 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 C22orf34Q6ZV56 151 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 RIN3Q8TB24 985 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 GRIN3AQ8TCU5 1115 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 EPS8L3Q8TE67 593 aaKnown RBP3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 RNF32Q9H0A6 362 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 XYLT2Q9H1B5 865 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 ADAMTS10Q9H324 1103 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 SP110Q9HB58 689 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 RTEL1Q9NZ71 1219 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 ZSWIM5Q9P217 1185 aa3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 TPX2Q9ULW0 747 aaKnown RBP3.58□□□□□ -1.84
RNU6-239P-201ENST00000390990 TMEM88BA6NKF7 163 aa3.57□□□□□ -1.84
RNU6-239P-201ENST00000390990 WASH4PA8MWX3 477 aa3.57□□□□□ -1.84
RNU6-239P-201ENST00000390990 EIF1AYO14602 144 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms