RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
TRAV4-201ENST00000390426 BAG3O95817 575 aa13.12□□□□□ -0.31
TRAV4-201ENST00000390426 GRK4P32298 578 aa13.12□□□□□ -0.31
TRAV4-201ENST00000390426 FCGRTP55899 365 aa13.12□□□□□ -0.31
TRAV4-201ENST00000390426 PRKCZQ05513 592 aa13.12□□□□□ -0.31
TRAV4-201ENST00000390426 MTFR1Q15390 333 aa13.12□□□□□ -0.31
TRAV4-201ENST00000390426 MAPKAPK5Q8IW41 473 aa13.12□□□□□ -0.31
TRAV4-201ENST00000390426 PIH1D3Q9NQM4 214 aaKnown RBP13.12□□□□□ -0.31
TRAV4-201ENST00000390426 DBNLQ9UJU6 430 aaKnown RBP13.12□□□□□ -0.31
TRAV4-201ENST00000390426 CAP2P40123 477 aa13.11□□□□□ -0.31
TRAV4-201ENST00000390426 PPP4CP60510 307 aa13.11□□□□□ -0.31
TRAV4-201ENST00000390426 SPP2Q13103 211 aa13.11□□□□□ -0.31
TRAV4-201ENST00000390426 TREML2Q5T2D2 321 aa13.11□□□□□ -0.31
TRAV4-201ENST00000390426 ADGRA1Q86SQ6 560 aa13.11□□□□□ -0.31
TRAV4-201ENST00000390426 PANK1Q8TE04 598 aa13.11□□□□□ -0.31
TRAV4-201ENST00000390426 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
TRAV4-201ENST00000390426 EAF2Q96CJ1 260 aaPredicted RBP13.11□□□□□ -0.31
TRAV4-201ENST00000390426 BIN2Q9UBW5 565 aaPredicted RBP13.11□□□□□ -0.31
TRAV4-201ENST00000390426 GABRQQ9UN88 632 aa13.11□□□□□ -0.31
TRAV4-201ENST00000390426 AGTPBP1Q9UPW5 1226 aa13.11□□□□□ -0.31
TRAV4-201ENST00000390426 SLC45A1Q9Y2W3 748 aa13.11□□□□□ -0.31
TRAV4-201ENST00000390426 USP17L5A8MUK1 530 aa13.1□□□□□ -0.31
TRAV4-201ENST00000390426 PLCG2P16885 1265 aa13.1□□□□□ -0.31
TRAV4-201ENST00000390426 DYNLL1P63167 89 aaKnown RBP13.1□□□□□ -0.31
TRAV4-201ENST00000390426 CEP85Q6P2H3 762 aa13.1□□□□□ -0.31
TRAV4-201ENST00000390426 ZNF280CQ8ND82 737 aa13.1□□□□□ -0.31
TRAV4-201ENST00000390426 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
TRAV4-201ENST00000390426 ZNF512BQ96KM6 892 aaPredicted RBP13.1□□□□□ -0.31
TRAV4-201ENST00000390426 PI4KBQ9UBF8 816 aa13.1□□□□□ -0.31
TRAV4-201ENST00000390426 EXOC6BQ9Y2D4 811 aa13.1□□□□□ -0.31
TRAV4-201ENST00000390426 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
TRAV4-201ENST00000390426 RBBP6Q7Z6E9 1792 aaKnown RBP13.09□□□□□ -0.31
TRAV4-201ENST00000390426 CYP7A1P22680 504 aa13.09□□□□□ -0.31
TRAV4-201ENST00000390426 HMGCS2P54868 508 aa13.09□□□□□ -0.31
TRAV4-201ENST00000390426 DOCK1Q14185 1865 aa13.09□□□□□ -0.31
TRAV4-201ENST00000390426 ANKRD13CQ8N6S4 541 aa13.09□□□□□ -0.31
TRAV4-201ENST00000390426 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
TRAV4-201ENST00000390426 DHX36Q9H2U1 1008 aaKnown RBP13.09□□□□□ -0.31
TRAV4-201ENST00000390426 SAP30BPQ9UHR5 308 aaKnown RBP13.09□□□□□ -0.31
TRAV4-201ENST00000390426 HERC5Q9UII4 1024 aaKnown RBP13.09□□□□□ -0.31
TRAV4-201ENST00000390426 NDUFB9Q9Y6M9 179 aa13.09□□□□□ -0.31
TRAV4-201ENST00000390426 FLT1P17948 1338 aa13.09□□□□□ -0.31
TRAV4-201ENST00000390426 ZBED9Q6R2W3 1325 aa13.09□□□□□ -0.31
TRAV4-201ENST00000390426 HTTP42858 3142 aa13.08□□□□□ -0.32
TRAV4-201ENST00000390426 IDH1O75874 414 aaKnown RBP13.08□□□□□ -0.32
TRAV4-201ENST00000390426 CCL5P13501 91 aa13.08□□□□□ -0.32
TRAV4-201ENST00000390426 KCNA4P22459 653 aa13.08□□□□□ -0.32
TRAV4-201ENST00000390426 JAG1P78504 1218 aa13.08□□□□□ -0.32
TRAV4-201ENST00000390426 CRACR2BQ8N4Y2 399 aaPredicted RBP13.08□□□□□ -0.32
TRAV4-201ENST00000390426 PNMA3Q9UL41 463 aa13.08□□□□□ -0.32
TRAV4-201ENST00000390426 PALD1Q9ULE6 856 aa13.08□□□□□ -0.32
TRAV4-201ENST00000390426 PHIPQ8WWQ0 1821 aa13.08□□□□□ -0.32
TRAV4-201ENST00000390426 TNPO2O14787 897 aaKnown RBP13.07□□□□□ -0.32
TRAV4-201ENST00000390426 ADCY3O60266 1144 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 ELNP15502 786 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 FLT3LGP49771 235 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 UBXN2AP68543 259 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 SHROOM1Q2M3G4 852 aaPredicted RBP13.07□□□□□ -0.32
TRAV4-201ENST00000390426 AACSQ86V21 672 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 FOXP4Q8IVH2 680 aaPredicted RBP13.07□□□□□ -0.32
TRAV4-201ENST00000390426 MIGA1Q8NAN2 632 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 SLAIN1Q8ND83 568 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 GCC1Q96CN9 775 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 SHISA4Q96DD7 197 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 TRIM34Q9BYJ4 488 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 TBC1D2Q9BYX2 928 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 RNF208Q9H0X6 261 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 ANTXR1Q9H6X2 564 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 DNAJC18Q9H819 358 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 AS3MTQ9HBK9 375 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
TRAV4-201ENST00000390426 GDF11O95390 407 aa13.06□□□□□ -0.32
TRAV4-201ENST00000390426 PABPC4Q13310 644 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAV4-201ENST00000390426 SH3D19Q5HYK7 790 aa13.06□□□□□ -0.32
TRAV4-201ENST00000390426 ERC1Q8IUD2 1116 aa13.06□□□□□ -0.32
TRAV4-201ENST00000390426 MAGEB6Q8N7X4 407 aa13.06□□□□□ -0.32
TRAV4-201ENST00000390426 WDR18Q9BV38 432 aa13.06□□□□□ -0.32
TRAV4-201ENST00000390426 BCL11AQ9H165 835 aa13.06□□□□□ -0.32
TRAV4-201ENST00000390426 UNC93B1Q9H1C4 597 aa13.06□□□□□ -0.32
TRAV4-201ENST00000390426 ASCC2Q9H1I8 757 aaPredicted RBP13.06□□□□□ -0.32
TRAV4-201ENST00000390426 IL1RAPL2Q9NP60 686 aa13.06□□□□□ -0.32
TRAV4-201ENST00000390426 APBB1O00213 710 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 IGSF3O75054 1194 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 HLA-DOAP06340 250 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 GJB1P08034 283 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 ASNSP08243 561 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 USP5P45974 858 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 GJA8P48165 433 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 MTMR2Q13614 643 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 FAM110CQ1W6H9 321 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 HABP4Q5JVS0 413 aaKnown RBP13.05□□□□□ -0.32
TRAV4-201ENST00000390426 METTL16Q86W50 562 aaKnown RBP13.05□□□□□ -0.32
TRAV4-201ENST00000390426 NKX2-3Q8TAU0 364 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 COA7Q96BR5 231 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 PTPRFP10586 1907 aa13.05□□□□□ -0.32
TRAV4-201ENST00000390426 INHAP05111 366 aa13.04□□□□□ -0.32
TRAV4-201ENST00000390426 GCLCP48506 637 aaPredicted RBP13.04□□□□□ -0.32
TRAV4-201ENST00000390426 BACE1P56817 501 aa13.04□□□□□ -0.32
TRAV4-201ENST00000390426 MAP3K12Q12852 859 aa13.04□□□□□ -0.32
TRAV4-201ENST00000390426 IRF5Q13568 498 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms