RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 TRIM27P14373 513 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 MCM5P33992 734 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 RFC4P35249 363 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 MRPL58Q14197 206 aaKnown RBP9.09□□□□□ -0.95
TRBV28-201ENST00000390400 TEAD4Q15561 434 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 SLC15A2Q16348 729 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 TTLL7Q6ZT98 887 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 Q6ZVU0 165 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 FTSJ3Q8IY81 847 aaKnown RBP9.09□□□□□ -0.95
TRBV28-201ENST00000390400 SMAP1Q8IYB5 467 aaPredicted RBP9.09□□□□□ -0.95
TRBV28-201ENST00000390400 PI4KAP1Q8N8J0 262 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 FLAD1Q8NFF5 587 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 DNAAF4Q8WXU2 420 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 TRIM44Q96DX7 344 aaPredicted RBP9.09□□□□□ -0.95
TRBV28-201ENST00000390400 FAM161BQ96MY7 647 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 FAM129BQ96TA1 746 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 PGPEP1Q9NXJ5 209 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 KLK14Q9P0G3 267 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 ADCY9O60503 1353 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 BCORQ6W2J9 1755 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 ARFGEF2Q9Y6D5 1785 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 ABCC4O15439 1325 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 NUP98P52948 1817 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 SCN7AQ01118 1682 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 ERVV-1B6SEH8 477 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 F6X3S4 739 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 J3QL48 77 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 CAMTA2O94983 1202 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 XRCC6P12956 609 aaKnown RBP eCLIP9.08□□□□□ -0.96
TRBV28-201ENST00000390400 MCM4P33991 863 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 NOS2P35228 1153 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 PTGIRP43119 386 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 CCDC173Q0VFZ6 552 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 CLN3Q13286 438 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 UTP14CQ5TAP6 766 aaKnown RBP9.08□□□□□ -0.96
TRBV28-201ENST00000390400 SLC4A10Q6U841 1118 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 SMIM5Q71RC9 77 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 AMIGO3Q86WK7 504 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 DZIP1LQ8IYY4 767 aaKnown RBP9.08□□□□□ -0.96
TRBV28-201ENST00000390400 TBC1D32Q96NH3 1257 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 NARFQ9UHQ1 456 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 ZNF652Q9Y2D9 606 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 MAP3K2Q9Y2U5 619 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 PXDNLA1KZ92 1463 aa9.08□□□□□ -0.96
TRBV28-201ENST00000390400 USP42Q9H9J4 1324 aaKnown RBP9.07□□□□□ -0.96
TRBV28-201ENST00000390400 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
TRBV28-201ENST00000390400 NEXNQ0ZGT2 675 aa9.07□□□□□ -0.96
TRBV28-201ENST00000390400 HSP90AB3PQ58FF7 597 aa9.07□□□□□ -0.96
TRBV28-201ENST00000390400 ALDH16A1Q8IZ83 802 aa9.07□□□□□ -0.96
TRBV28-201ENST00000390400 ANP32BQ92688 251 aaKnown RBP9.07□□□□□ -0.96
TRBV28-201ENST00000390400 METTL22Q9BUU2 404 aaPredicted RBP9.07□□□□□ -0.96
TRBV28-201ENST00000390400 ZNF395Q9H8N7 513 aaPredicted RBP9.07□□□□□ -0.96
TRBV28-201ENST00000390400 SRP68Q9UHB9 627 aaKnown RBP9.07□□□□□ -0.96
TRBV28-201ENST00000390400 POLIQ9UNA4 740 aa9.07□□□□□ -0.96
TRBV28-201ENST00000390400 PNPLA7Q6ZV29 1317 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 SERTM1A2A2V5 107 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 NDUFB5O43674 189 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 RLBP1P12271 317 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 CCT4P50991 539 aaKnown RBP9.06□□□□□ -0.96
TRBV28-201ENST00000390400 EHHADHQ08426 723 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 FOXC1Q12948 553 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 HLFQ16534 295 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 USPL1Q5W0Q7 1092 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 CLEC4GQ6UXB4 293 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 COL23A1Q86Y22 540 aaPredicted RBP9.06□□□□□ -0.96
TRBV28-201ENST00000390400 PANK1Q8TE04 598 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 C7orf43Q8WVR3 580 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 PPP1R9BQ96SB3 815 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 MYD88Q99836 296 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 GRPEL1Q9HAV7 217 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 TNNQ9UQP3 1299 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 BCS1LQ9Y276 419 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 ANKRD36CQ5JPF3 1778 aa9.06□□□□□ -0.96
TRBV28-201ENST00000390400 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 AFDNP55196 1824 aaKnown RBP9.05□□□□□ -0.96
TRBV28-201ENST00000390400 OFD1O75665 1012 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 ALDH1L1O75891 902 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 TXLNAP40222 546 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 HIRAP54198 1017 aaPredicted RBP9.05□□□□□ -0.96
TRBV28-201ENST00000390400 TCIRG1Q13488 830 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 DGKZQ13574 1117 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 TSNAXIP1Q2TAA8 658 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 BEND3Q5T5X7 828 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 C20orf194Q5TEA3 1177 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 ZNF697Q5TEC3 545 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 INTS3Q68E01 1043 aaKnown RBP9.05□□□□□ -0.96
TRBV28-201ENST00000390400 CLEC17AQ6ZS10 378 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 ITPRIPQ8IWB1 547 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 LINS1Q8NG48 757 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 GBP4Q96PP9 640 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 PRKD2Q9BZL6 878 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 PHACTR1Q9C0D0 580 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 SRCIN1Q9C0H9 1055 aa9.05□□□□□ -0.96
TRBV28-201ENST00000390400 MEN1O00255 615 aa9.04□□□□□ -0.96
TRBV28-201ENST00000390400 ZIC2O95409 532 aaPredicted RBP9.04□□□□□ -0.96
TRBV28-201ENST00000390400 TIMP2P16035 220 aa9.04□□□□□ -0.96
TRBV28-201ENST00000390400 GPTP24298 496 aa9.04□□□□□ -0.96
TRBV28-201ENST00000390400 MAPK8P45983 427 aa9.04□□□□□ -0.96
TRBV28-201ENST00000390400 RELBQ01201 579 aa9.04□□□□□ -0.96
TRBV28-201ENST00000390400 PLCB3Q01970 1234 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms