RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 GRIK5Q16478 980 aa21.15■□□□□ 0.98
ACTN4-202ENST00000390009 NLGN1Q8N2Q7 840 aa21.15■□□□□ 0.98
ACTN4-202ENST00000390009 ENAHQ8N8S7 591 aaPredicted RBP21.15■□□□□ 0.98
ACTN4-202ENST00000390009 TNMDQ9H2S6 317 aa21.15■□□□□ 0.98
ACTN4-202ENST00000390009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.15■□□□□ 0.98
ACTN4-202ENST00000390009 GSTO1P78417 241 aa21.14■□□□□ 0.98
ACTN4-202ENST00000390009 SBK1Q52WX2 424 aa21.14■□□□□ 0.98
ACTN4-202ENST00000390009 NUP133Q8WUM0 1156 aa21.14■□□□□ 0.98
ACTN4-202ENST00000390009 PDLIM2Q96JY6 352 aa21.14■□□□□ 0.98
ACTN4-202ENST00000390009 CLSTN2Q9H4D0 955 aa21.14■□□□□ 0.98
ACTN4-202ENST00000390009 CCDC196A0A1B0GTZ2 297 aa21.14■□□□□ 0.97
ACTN4-202ENST00000390009 IL1R1P14778 569 aa21.14■□□□□ 0.97
ACTN4-202ENST00000390009 IQCA1Q86XH1 822 aa21.14■□□□□ 0.97
ACTN4-202ENST00000390009 FANCBQ8NB91 859 aa21.14■□□□□ 0.97
ACTN4-202ENST00000390009 TBC1D16Q8TBP0 767 aa21.14■□□□□ 0.97
ACTN4-202ENST00000390009 POLR3EQ9NVU0 708 aa21.14■□□□□ 0.97
ACTN4-202ENST00000390009 POLLQ9UGP5 575 aa21.14■□□□□ 0.97
ACTN4-202ENST00000390009 UBE2Q2LH0YL09 131 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 ORC4O43929 436 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 DIXDC1Q155Q3 683 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 SLC3A2P08195 630 aaKnown RBP21.13■□□□□ 0.97
ACTN4-202ENST00000390009 CCDC192P0DO97 292 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 CYP2D6P10635 497 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 ME1P48163 572 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 TRIM29Q14134 588 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 TMC4Q7Z404 712 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 CCAR1Q8IX12 1150 aaKnown RBP21.13■□□□□ 0.97
ACTN4-202ENST00000390009 TRIM22Q8IYM9 498 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 LINC00301Q8NCQ3 95 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 WASF1Q92558 559 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 TAOK2Q9UL54 1235 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 CLIC4Q9Y696 253 aa21.13■□□□□ 0.97
ACTN4-202ENST00000390009 NAV1Q8NEY1 1877 aa21.12■□□□□ 0.97
ACTN4-202ENST00000390009 CDK5RAP2Q96SN8 1893 aa21.12■□□□□ 0.97
ACTN4-202ENST00000390009 PPEF1O14829 653 aaPredicted RBP21.12■□□□□ 0.97
ACTN4-202ENST00000390009 UVSSAQ2YD98 709 aa21.12■□□□□ 0.97
ACTN4-202ENST00000390009 IFIT1BQ5T764 474 aaKnown RBP21.12■□□□□ 0.97
ACTN4-202ENST00000390009 RBM43Q6ZSC3 357 aaKnown RBP21.12■□□□□ 0.97
ACTN4-202ENST00000390009 MCM9Q9NXL9 1143 aa21.12■□□□□ 0.97
ACTN4-202ENST00000390009 YEATS4O95619 227 aa21.11■□□□□ 0.97
ACTN4-202ENST00000390009 NBPF11Q86T75 865 aa21.11■□□□□ 0.97
ACTN4-202ENST00000390009 SH3RF3Q8TEJ3 882 aaPredicted RBP21.11■□□□□ 0.97
ACTN4-202ENST00000390009 MKRN1Q9UHC7 482 aaKnown RBP21.11■□□□□ 0.97
ACTN4-202ENST00000390009 BAG3O95817 575 aa21.11■□□□□ 0.97
ACTN4-202ENST00000390009 LDHCP07864 332 aa21.11■□□□□ 0.97
ACTN4-202ENST00000390009 USP5P45974 858 aa21.11■□□□□ 0.97
ACTN4-202ENST00000390009 PPP2R5BQ15173 497 aa21.11■□□□□ 0.97
ACTN4-202ENST00000390009 STK38Q15208 465 aa21.11■□□□□ 0.97
ACTN4-202ENST00000390009 SP8Q8IXZ3 490 aa21.11■□□□□ 0.97
ACTN4-202ENST00000390009 CKAP2LQ8IYA6 745 aa21.11■□□□□ 0.97
ACTN4-202ENST00000390009 CRACR2BQ8N4Y2 399 aaPredicted RBP21.11■□□□□ 0.97
ACTN4-202ENST00000390009 GOLPH3LQ9H4A5 285 aa21.11■□□□□ 0.97
ACTN4-202ENST00000390009 PCDHA7Q9UN72 937 aa21.11■□□□□ 0.97
ACTN4-202ENST00000390009 MROH7-TTC4A0A0A0MT08 1334 aa21.1■□□□□ 0.97
ACTN4-202ENST00000390009 C6orf229H3BNL8 230 aa21.1■□□□□ 0.97
ACTN4-202ENST00000390009 USP17L8P0C7I0 530 aa21.1■□□□□ 0.97
ACTN4-202ENST00000390009 GUCY1A2P33402 732 aa21.1■□□□□ 0.97
ACTN4-202ENST00000390009 PPP4CP60510 307 aa21.1■□□□□ 0.97
ACTN4-202ENST00000390009 PDE4BQ07343 736 aa21.1■□□□□ 0.97
ACTN4-202ENST00000390009 CMTR1Q8N1G2 835 aaKnown RBP21.1■□□□□ 0.97
ACTN4-202ENST00000390009 CCDC82Q8N4S0 544 aa21.1■□□□□ 0.97
ACTN4-202ENST00000390009 FLAD1Q8NFF5 587 aa21.1■□□□□ 0.97
ACTN4-202ENST00000390009 KCNG4Q8TDN1 519 aa21.1■□□□□ 0.97
ACTN4-202ENST00000390009 TNS1Q9HBL0 1735 aaKnown RBP21.1■□□□□ 0.97
ACTN4-202ENST00000390009 GNL2Q13823 731 aaKnown RBP21.1■□□□□ 0.97
ACTN4-202ENST00000390009 CCDC73Q6ZRK6 1079 aa21.1■□□□□ 0.97
ACTN4-202ENST00000390009 NOL10Q9BSC4 688 aaKnown RBP21.1■□□□□ 0.97
ACTN4-202ENST00000390009 COL11A2P13942 1736 aaPredicted RBP21.09■□□□□ 0.97
ACTN4-202ENST00000390009 DEXIO95424 95 aa21.09■□□□□ 0.97
ACTN4-202ENST00000390009 SRGNP10124 158 aa21.09■□□□□ 0.97
ACTN4-202ENST00000390009 U2AF2P26368 475 aaKnown RBP eCLIP21.09■□□□□ 0.97
ACTN4-202ENST00000390009 SF3A1Q15459 793 aaKnown RBP21.09■□□□□ 0.97
ACTN4-202ENST00000390009 ANO1Q5XXA6 986 aa21.09■□□□□ 0.97
ACTN4-202ENST00000390009 ADALQ6DHV7 355 aa21.09■□□□□ 0.97
ACTN4-202ENST00000390009 CATIPQ7Z7H3 387 aa21.09■□□□□ 0.97
ACTN4-202ENST00000390009 ATP6V0A2Q9Y487 856 aa21.09■□□□□ 0.97
ACTN4-202ENST00000390009 RXRBP28702 533 aa21.08■□□□□ 0.97
ACTN4-202ENST00000390009 TYRO3Q06418 890 aa21.08■□□□□ 0.97
ACTN4-202ENST00000390009 SLC4A8Q2Y0W8 1093 aa21.08■□□□□ 0.97
ACTN4-202ENST00000390009 RTFDC1Q9BY42 306 aaPredicted RBP21.08■□□□□ 0.97
ACTN4-202ENST00000390009 RRAGDQ9NQL2 400 aaPredicted RBP21.08■□□□□ 0.97
ACTN4-202ENST00000390009 SPTLC2O15270 562 aa21.08■□□□□ 0.96
ACTN4-202ENST00000390009 SNW1Q13573 536 aaKnown RBP21.08■□□□□ 0.96
ACTN4-202ENST00000390009 FAM47AQ5JRC9 791 aa21.08■□□□□ 0.96
ACTN4-202ENST00000390009 C12orf60Q5U649 245 aa21.08■□□□□ 0.96
ACTN4-202ENST00000390009 FSIP1Q8NA03 581 aa21.08■□□□□ 0.96
ACTN4-202ENST00000390009 MMP10P09238 476 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 NPR1P16066 1061 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 FAM160A1Q05DH4 1040 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 TROAPQ12815 778 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 MFSD14BQ5SR56 506 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 ENGASEQ8NFI3 743 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 A0A1W2PQ27 194 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 A0A1W2PQ64 194 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 A0A1W2PQD8 194 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 NMT2O60551 498 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 MMP1P03956 469 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 CALM1P0DP23 149 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 CALM2P0DP24 149 aa21.07■□□□□ 0.96
ACTN4-202ENST00000390009 CALM3P0DP25 149 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms