RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 PLVAPQ9BX97 442 aa11.59□□□□□ -0.55
PKP4-201ENST00000389757 ARHGEF35A5YM69 484 aa11.59□□□□□ -0.55
PKP4-201ENST00000389757 SEC24BO95487 1268 aa11.59□□□□□ -0.55
PKP4-201ENST00000389757 ACTN2P35609 894 aa11.59□□□□□ -0.55
PKP4-201ENST00000389757 UBE3CQ15386 1083 aa11.59□□□□□ -0.55
PKP4-201ENST00000389757 ATP10DQ9P241 1426 aa11.59□□□□□ -0.55
PKP4-201ENST00000389757 H0YHG0 523 aa11.58□□□□□ -0.55
PKP4-201ENST00000389757 NPR1P16066 1061 aa11.58□□□□□ -0.55
PKP4-201ENST00000389757 MCM3P25205 808 aa11.58□□□□□ -0.55
PKP4-201ENST00000389757 HSPA4P34932 840 aa11.58□□□□□ -0.55
PKP4-201ENST00000389757 PPP1R2P41236 205 aa11.58□□□□□ -0.55
PKP4-201ENST00000389757 DALRD3Q5D0E6 543 aaKnown RBP11.58□□□□□ -0.55
PKP4-201ENST00000389757 NCAPH2Q6IBW4 605 aa11.58□□□□□ -0.55
PKP4-201ENST00000389757 CLEC4GQ6UXB4 293 aa11.58□□□□□ -0.55
PKP4-201ENST00000389757 PHKBQ93100 1093 aa11.58□□□□□ -0.55
PKP4-201ENST00000389757 PAGR1Q9BTK6 254 aa11.58□□□□□ -0.55
PKP4-201ENST00000389757 STX17P56962 302 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 MAP9Q49MG5 647 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 LEKR1Q6ZMV7 388 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 ZNF654Q8IZM8 581 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 ABCA9Q8IUA7 1624 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 ALKQ9UM73 1620 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 CCDC169A6NNP5 214 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 ICA1Q05084 483 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 REXO1Q8N1G1 1221 aaKnown RBP11.58□□□□□ -0.56
PKP4-201ENST00000389757 ZSCAN10Q96SZ4 725 aaPredicted RBP11.58□□□□□ -0.56
PKP4-201ENST00000389757 TSPYL1Q9H0U9 437 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 CWC15Q9P013 229 aaKnown RBP11.58□□□□□ -0.56
PKP4-201ENST00000389757 JCADQ9P266 1359 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 RNF17Q9BXT8 1623 aaKnown RBP11.58□□□□□ -0.56
PKP4-201ENST00000389757 CCDC102AQ96A19 550 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 NCAPD2Q15021 1401 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 A0A0D9SFI3 127 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 ADORA1P30542 326 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 TM6SF1Q9BZW5 370 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 DBNDD1Q9H9R9 158 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 ATG3Q9NT62 314 aa11.58□□□□□ -0.56
PKP4-201ENST00000389757 DDX39AO00148 427 aaKnown RBP11.57□□□□□ -0.56
PKP4-201ENST00000389757 TMX1Q9H3N1 280 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 LRWD1Q9UFC0 647 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 FRMD4BQ9Y2L6 1034 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 AXIN2Q9Y2T1 843 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 HARSP12081 509 aaKnown RBP11.57□□□□□ -0.56
PKP4-201ENST00000389757 KRT40Q6A162 431 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 DPH6Q7L8W6 267 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 KIF22Q14807 665 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 GADL1Q6ZQY3 521 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 NEK11Q8NG66 645 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 ATP8A2Q9NTI2 1148 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 PNMA2Q9UL42 364 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 A0A1B0GVL5 298 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 HSPD1P10809 573 aaKnown RBP11.57□□□□□ -0.56
PKP4-201ENST00000389757 PPM1FP49593 454 aaPredicted RBP11.57□□□□□ -0.56
PKP4-201ENST00000389757 TYRO3Q06418 890 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 GRAPQ13588 217 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 FNBP4Q8N3X1 1017 aaPredicted RBP11.57□□□□□ -0.56
PKP4-201ENST00000389757 TTLL6Q8N841 843 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 MSANTD4Q8NCY6 345 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 GRAPLQ8TC17 118 aaPredicted RBP11.57□□□□□ -0.56
PKP4-201ENST00000389757 GJD4Q96KN9 370 aaPredicted RBP11.57□□□□□ -0.56
PKP4-201ENST00000389757 FNBP1Q96RU3 617 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 KDM2BQ8NHM5 1336 aa11.57□□□□□ -0.56
PKP4-201ENST00000389757 ZNF853P0CG23 659 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 FAM160A1Q05DH4 1040 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 OTUD7BQ6GQQ9 843 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 NLRX1Q86UT6 975 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 TTC12Q9H892 705 aaPredicted RBP11.56□□□□□ -0.56
PKP4-201ENST00000389757 JADE2Q9NQC1 790 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 GINS2Q9Y248 185 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 STRN3Q13033 797 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 SNX29Q8TEQ0 813 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 CEP83Q9Y592 693 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 OVOS2A0A0G2JMS6 1433 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 OVOS2A0A0J9YW53 1432 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 OVOS2Q6IE36 1432 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 UQCRHLA0A096LP55 91 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 CLRN2A0PK11 232 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 UQCRHP07919 91 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 TAF12Q16514 161 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 RTKN2Q8IZC4 609 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 SEC62Q99442 399 aaKnown RBP11.56□□□□□ -0.56
PKP4-201ENST00000389757 SPC25Q9HBM1 224 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 DBNLQ9UJU6 430 aaKnown RBP11.56□□□□□ -0.56
PKP4-201ENST00000389757 EXOC7Q9UPT5 735 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 TRAF5O00463 557 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 PCP11498 1178 aaKnown RBP11.56□□□□□ -0.56
PKP4-201ENST00000389757 CALCRLQ16602 461 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 ABCB5Q2M3G0 1257 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 PNMA1Q8ND90 353 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 PDE4DQ08499 809 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 BIRC3Q13489 604 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 GNPTABQ3T906 1256 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 SUSD4Q5VX71 490 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 CCDC97Q96F63 343 aaPredicted RBP11.56□□□□□ -0.56
PKP4-201ENST00000389757 MASTLQ96GX5 879 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 CCDC17Q96LX7 622 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 C16orf45Q96MC5 204 aaPredicted RBP11.56□□□□□ -0.56
PKP4-201ENST00000389757 KCNH3Q9ULD8 1083 aa11.56□□□□□ -0.56
PKP4-201ENST00000389757 hCG_1642624A0A1W2PR95 340 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms