RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 SBK1Q52WX2 424 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 FAM47AQ5JRC9 791 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 C12orf60Q5U649 245 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 APOBEC3HQ6NTF7 200 aaKnown RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 CDC42EP5Q6NZY7 148 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 JDP2Q8WYK2 163 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 TNPO1Q92973 898 aaKnown RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 DDX4Q9NQI0 724 aaKnown RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 ZNRF3Q9ULT6 936 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 ERICH2A1L162 156 aa9.4□□□□□ -0.9
ERCC8-202ENST00000381118 GOLGA8BA8MQT2 603 aa9.4□□□□□ -0.9
ERCC8-202ENST00000381118 PDE4BQ07343 736 aa9.4□□□□□ -0.9
ERCC8-202ENST00000381118 RSBN1LQ6PCB5 846 aaPredicted RBP9.4□□□□□ -0.9
ERCC8-202ENST00000381118 CCDC144CPQ8IYA2 1237 aa9.4□□□□□ -0.9
ERCC8-202ENST00000381118 SLC44A5Q8NCS7 719 aa9.4□□□□□ -0.9
ERCC8-202ENST00000381118 IGDCC4Q8TDY8 1250 aa9.4□□□□□ -0.9
ERCC8-202ENST00000381118 TMEM87BQ96K49 555 aa9.4□□□□□ -0.9
ERCC8-202ENST00000381118 UBAC1Q9BSL1 405 aa9.4□□□□□ -0.9
ERCC8-202ENST00000381118 MYL10Q9BUA6 226 aa9.4□□□□□ -0.9
ERCC8-202ENST00000381118 WDR19Q8NEZ3 1342 aa9.4□□□□□ -0.9
ERCC8-202ENST00000381118 TCHHQ07283 1943 aa9.4□□□□□ -0.9
ERCC8-202ENST00000381118 JAK2O60674 1132 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 PFKFB2O60825 505 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 WDHD1O75717 1129 aaPredicted RBP9.4□□□□□ -0.91
ERCC8-202ENST00000381118 NUCB2P80303 420 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 TCP10Q12799 353 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 NFIAQ12857 509 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 SART3Q15020 963 aaKnown RBP9.4□□□□□ -0.91
ERCC8-202ENST00000381118 CFAP100Q494V2 611 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 MICU3Q86XE3 530 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 FBXL16Q8N461 479 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 DDX11Q96FC9 970 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 ZNF274Q96GC6 653 aaPredicted RBP9.4□□□□□ -0.91
ERCC8-202ENST00000381118 ZDHHC15Q96MV8 337 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 LY9Q9HBG7 655 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 TNKSO95271 1327 aa9.4□□□□□ -0.91
ERCC8-202ENST00000381118 CCDC69A6NI79 296 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 TSPY2A6NKD2 308 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 NMT2O60551 498 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 VIL1P09327 827 aaKnown RBP9.39□□□□□ -0.91
ERCC8-202ENST00000381118 CXCL9Q07325 125 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 WTAPQ15007 396 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 VPS33BQ9H267 617 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 SERPINA10Q9UK55 444 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.39□□□□□ -0.91
ERCC8-202ENST00000381118 ZDHHC9Q9Y397 364 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 PRELPP51888 382 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 FOXD4L6Q3SYB3 417 aaPredicted RBP9.39□□□□□ -0.91
ERCC8-202ENST00000381118 APOA5Q6Q788 366 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 FOXD4L3Q6VB84 417 aaPredicted RBP9.39□□□□□ -0.91
ERCC8-202ENST00000381118 IQCA1Q86XH1 822 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 OGFOD1Q8N543 542 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 TDRD3Q9H7E2 651 aaKnown RBP9.39□□□□□ -0.91
ERCC8-202ENST00000381118 TAOK2Q9UL54 1235 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 SLC12A7Q9Y666 1083 aa9.39□□□□□ -0.91
ERCC8-202ENST00000381118 MYO3BQ8WXR4 1341 aa9.38□□□□□ -0.91
ERCC8-202ENST00000381118 CTDNEP1O95476 244 aa9.38□□□□□ -0.91
ERCC8-202ENST00000381118 FGRP09769 529 aa9.38□□□□□ -0.91
ERCC8-202ENST00000381118 PCP11498 1178 aaKnown RBP9.38□□□□□ -0.91
ERCC8-202ENST00000381118 SYT1P21579 422 aa9.38□□□□□ -0.91
ERCC8-202ENST00000381118 METAP2P50579 478 aaKnown RBP eCLIP9.38□□□□□ -0.91
ERCC8-202ENST00000381118 FOSBP53539 338 aa9.38□□□□□ -0.91
ERCC8-202ENST00000381118 EVCP57679 992 aa9.38□□□□□ -0.91
ERCC8-202ENST00000381118 CIAPIN1Q6FI81 312 aa9.38□□□□□ -0.91
ERCC8-202ENST00000381118 PRMT6Q96LA8 375 aaPredicted RBP9.38□□□□□ -0.91
ERCC8-202ENST00000381118 ZSCAN10Q96SZ4 725 aaPredicted RBP9.38□□□□□ -0.91
ERCC8-202ENST00000381118 OSBPL5Q9H0X9 879 aaPredicted RBP9.38□□□□□ -0.91
ERCC8-202ENST00000381118 ROBO3Q96MS0 1386 aa9.38□□□□□ -0.91
ERCC8-202ENST00000381118 SBF1O95248 1867 aa9.38□□□□□ -0.91
ERCC8-202ENST00000381118 SHTN1A0MZ66 631 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 PTPDC1A2A3K4 754 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 VPS37CA5D8V6 355 aaPredicted RBP9.37□□□□□ -0.91
ERCC8-202ENST00000381118 ZBTB43O43298 467 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 STX6O43752 255 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 ORC4O43929 436 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 SLURP2P0DP57 97 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 LIFRP42702 1097 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 HDLBPQ00341 1268 aaKnown RBP9.37□□□□□ -0.91
ERCC8-202ENST00000381118 TFAP4Q01664 338 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 LARP1BQ659C4 914 aaKnown RBP9.37□□□□□ -0.91
ERCC8-202ENST00000381118 ARHGAP27Q6ZUM4 889 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 SGMS1Q86VZ5 419 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 ZFPM1Q8IX07 1006 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 ZNF444Q8N0Y2 327 aaPredicted RBP9.37□□□□□ -0.91
ERCC8-202ENST00000381118 ENAHQ8N8S7 591 aaPredicted RBP9.37□□□□□ -0.91
ERCC8-202ENST00000381118 NSUN7Q8NE18 718 aaKnown RBP9.37□□□□□ -0.91
ERCC8-202ENST00000381118 NUP133Q8WUM0 1156 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 CHAMP1Q96JM3 812 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 MRIQ9BWK5 157 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 HDAC9Q9UKV0 1011 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 MYH6P13533 1939 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 CLRN2A0PK11 232 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 CPLX1O14810 134 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 TSPY3P0CV98 308 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 TSPY8P0CW00 308 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 ADD1P35611 737 aaKnown RBP9.37□□□□□ -0.91
ERCC8-202ENST00000381118 CDK8P49336 464 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 IFIT1BQ5T764 474 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms