RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 GAKO14976 1311 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 GOLGA6L3A6NEY3 463 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 KIAA2012Q0VF49 1180 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 SART3Q15020 963 aaKnown RBP12.83□□□□□ -0.36
FAM239A-201ENST00000381108 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 APOA5Q6Q788 366 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 CDC37L1Q7L3B6 337 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 MKRN1Q9UHC7 482 aaKnown RBP12.83□□□□□ -0.36
FAM239A-201ENST00000381108 MTMR6Q9Y217 621 aa12.83□□□□□ -0.36
FAM239A-201ENST00000381108 TNKSO95271 1327 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 FLT1P17948 1338 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 ERICH2A1L162 156 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 CCDC69A6NI79 296 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 F13A1P00488 732 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
FAM239A-201ENST00000381108 RHBDL3P58872 404 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 PICALMQ13492 652 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 WTAPQ15007 396 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 FERMT3Q86UX7 667 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 SUPT20HQ8NEM7 779 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 DYNLL2Q96FJ2 89 aa12.82□□□□□ -0.36
FAM239A-201ENST00000381108 ZNF277Q9NRM2 450 aaPredicted RBP12.82□□□□□ -0.36
FAM239A-201ENST00000381108 CPLX1O14810 134 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 SLC3A2P08195 630 aaKnown RBP12.81□□□□□ -0.36
FAM239A-201ENST00000381108 PLCG2P16885 1265 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 PDCP20941 246 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 FAM47AQ5JRC9 791 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 AMOTL1Q8IY63 956 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
FAM239A-201ENST00000381108 LLPHQ9BRT6 129 aaKnown RBP12.81□□□□□ -0.36
FAM239A-201ENST00000381108 SUGT1Q9Y2Z0 365 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 SLC12A7Q9Y666 1083 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 ZNF646O15015 1829 aaPredicted RBP12.81□□□□□ -0.36
FAM239A-201ENST00000381108 TCHHQ07283 1943 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 ZBTB43O43298 467 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
FAM239A-201ENST00000381108 PLCD1P51178 756 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 PDE4BQ07343 736 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 DACT2Q5SW24 774 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 C12orf60Q5U649 245 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 STRIP1Q5VSL9 837 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 SGMS1Q86VZ5 419 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 CERS3Q8IU89 383 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 RTKN2Q8IZC4 609 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 MYH1P12882 1939 aa12.81□□□□□ -0.36
FAM239A-201ENST00000381108 USP17L3A6NCW0 530 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 USP17L4A6NCW7 530 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 YDJCA8MPS7 323 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 ADD1P35611 737 aaKnown RBP12.8□□□□□ -0.36
FAM239A-201ENST00000381108 LIFRP42702 1097 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 USP17L1Q7RTZ2 530 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 SLC44A5Q8NCS7 719 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 TEKT1Q969V4 418 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 GDPD2Q9HCC8 539 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 PIM2Q9P1W9 311 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.8□□□□□ -0.36
FAM239A-201ENST00000381108 PCDHAC2Q9Y5I4 1007 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 DDX60LQ5H9U9 1706 aaKnown RBP12.8□□□□□ -0.36
FAM239A-201ENST00000381108 FOCADQ5VW36 1801 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 TSPY2A6NKD2 308 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 GOLGA8AA7E2F4 631 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 H3BQV1 296 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 NMT2O60551 498 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 PRPF40AO75400 957 aaKnown RBP12.8□□□□□ -0.36
FAM239A-201ENST00000381108 RBM5P52756 815 aaKnown RBP eCLIP12.8□□□□□ -0.36
FAM239A-201ENST00000381108 TGFB2P61812 414 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 HMGN5P82970 282 aaKnown RBP12.8□□□□□ -0.36
FAM239A-201ENST00000381108 IFFO2Q5TF58 517 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 IQCA1Q86XH1 822 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 LARGE2Q8N3Y3 721 aa12.8□□□□□ -0.36
FAM239A-201ENST00000381108 ZSCAN10Q96SZ4 725 aaPredicted RBP12.8□□□□□ -0.36
FAM239A-201ENST00000381108 GZF1Q9H116 711 aaPredicted RBP12.8□□□□□ -0.36
FAM239A-201ENST00000381108 DHX16O60231 1041 aaKnown RBP12.79□□□□□ -0.36
FAM239A-201ENST00000381108 FGRP09769 529 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 NCLP19338 710 aaKnown RBP12.79□□□□□ -0.36
FAM239A-201ENST00000381108 CDC27P30260 824 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 CRKP46108 304 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 MRE11P49959 708 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 SYNE3Q6ZMZ3 975 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 ENAHQ8N8S7 591 aaPredicted RBP12.79□□□□□ -0.36
FAM239A-201ENST00000381108 NUP133Q8WUM0 1156 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 COL4A5P29400 1685 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 RAD17O75943 681 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 PCP11498 1178 aaKnown RBP12.79□□□□□ -0.36
FAM239A-201ENST00000381108 GUCY1B3Q02153 619 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 DALRD3Q5D0E6 543 aaKnown RBP12.79□□□□□ -0.36
FAM239A-201ENST00000381108 PSMD1Q99460 953 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 MKNK2Q9HBH9 465 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 USP40Q9NVE5 1235 aa12.79□□□□□ -0.36
FAM239A-201ENST00000381108 BRCA1P38398 1863 aaKnown RBP12.78□□□□□ -0.36
FAM239A-201ENST00000381108 ORC4O43929 436 aa12.78□□□□□ -0.36
FAM239A-201ENST00000381108 FDPSP14324 419 aaKnown RBP12.78□□□□□ -0.36
FAM239A-201ENST00000381108 CACNB3P54284 484 aa12.78□□□□□ -0.36
FAM239A-201ENST00000381108 SEC23AQ15436 765 aa12.78□□□□□ -0.36
FAM239A-201ENST00000381108 IFIT1BQ5T764 474 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms