RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 CASZ1Q86V15 1759 aa14.58□□□□□ -0.07
PUDP-201ENST00000381077 SEC23AQ15436 765 aa14.58□□□□□ -0.08
PUDP-201ENST00000381077 DPCR1Q3MIW9 517 aa14.58□□□□□ -0.08
PUDP-201ENST00000381077 CT47A1Q5JQC4 288 aaPredicted RBP14.58□□□□□ -0.08
PUDP-201ENST00000381077 KANK3Q6NY19 840 aa14.58□□□□□ -0.08
PUDP-201ENST00000381077 SHC4Q6S5L8 630 aa14.58□□□□□ -0.08
PUDP-201ENST00000381077 ZNF654Q8IZM8 581 aa14.58□□□□□ -0.08
PUDP-201ENST00000381077 CCDC34Q96HJ3 373 aa14.58□□□□□ -0.08
PUDP-201ENST00000381077 SENP2Q9HC62 589 aa14.58□□□□□ -0.08
PUDP-201ENST00000381077 NRBP1Q9UHY1 535 aa14.58□□□□□ -0.08
PUDP-201ENST00000381077 MROH7-TTC4A0A0A0MT08 1334 aa14.58□□□□□ -0.08
PUDP-201ENST00000381077 CBFA2T2O43439 604 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 RAB11FIP4Q86YS3 637 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 NKX2-3Q8TAU0 364 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 ACSBG1Q96GR2 724 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 AIFM3Q96NN9 605 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 ANKRD2Q9GZV1 360 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 GJB4Q9NTQ9 266 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 FAM13BQ9NYF5 915 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 KIAA1551Q9HCM1 1747 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 CTIFO43310 598 aaKnown RBP14.57□□□□□ -0.08
PUDP-201ENST00000381077 PTPREP23469 700 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 CCDC144BQ3MJ40 725 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 FBXO33Q7Z6M2 555 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 CCDC144CPQ8IYA2 1237 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 DIS3L2Q8IYB7 885 aaKnown RBP14.57□□□□□ -0.08
PUDP-201ENST00000381077 TRIML1Q8N9V2 468 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 MINPP1Q9UNW1 487 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 TACC3Q9Y6A5 838 aa14.57□□□□□ -0.08
PUDP-201ENST00000381077 PRKAB2O43741 272 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 DDAH1O94760 285 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 NCAPHQ15003 741 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 NT5DC1Q5TFE4 455 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 KRBA2Q6ZNG9 492 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 IQCA1Q86XH1 822 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 C17orf53Q8N3J3 647 aaPredicted RBP14.56□□□□□ -0.08
PUDP-201ENST00000381077 RAI14Q9P0K7 980 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 DACH1Q9UI36 760 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 KCNH3Q9ULD8 1083 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 ADAMTS2O95450 1211 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 RXRAP19793 462 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 MARCKSP29966 332 aaPredicted RBP14.56□□□□□ -0.08
PUDP-201ENST00000381077 LRMPQ12912 555 aa14.56□□□□□ -0.08
PUDP-201ENST00000381077 LAMB1P07942 1786 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 FAM177BA6PVY3 158 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 PRPF3O43395 683 aaKnown RBP14.55□□□□□ -0.08
PUDP-201ENST00000381077 ORC4O43929 436 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 AKAP17AQ02040 695 aaKnown RBP14.55□□□□□ -0.08
PUDP-201ENST00000381077 MYL5Q02045 173 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 ERFEQ4G0M1 354 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 OLFM4Q6UX06 510 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 CATIPQ7Z7H3 387 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 ATP8A2Q9NTI2 1148 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 NARFQ9UHQ1 456 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 SRPRBQ9Y5M8 271 aaKnown RBP14.55□□□□□ -0.08
PUDP-201ENST00000381077 TNKSO95271 1327 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 MYH6P13533 1939 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 MYH13Q9UKX3 1938 aa14.55□□□□□ -0.08
PUDP-201ENST00000381077 COL1A1P02452 1464 aaPredicted RBP14.55□□□□□ -0.08
PUDP-201ENST00000381077 SNAP23O00161 211 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 CCP110O43303 1012 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 SKILP12757 684 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 CCZ1BP86790 482 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 CCZ1P86791 482 aaPredicted RBP14.54□□□□□ -0.08
PUDP-201ENST00000381077 RRP12Q5JTH9 1297 aaKnown RBP14.54□□□□□ -0.08
PUDP-201ENST00000381077 CNNM3Q8NE01 707 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 FAM84BQ96KN1 310 aaPredicted RBP14.54□□□□□ -0.08
PUDP-201ENST00000381077 ZSCAN10Q96SZ4 725 aaPredicted RBP14.54□□□□□ -0.08
PUDP-201ENST00000381077 TOMM22Q9NS69 142 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 TNNT1P13805 278 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 VPS72Q15906 364 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 SBK1Q52WX2 424 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 MIGA1Q8NAN2 632 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 LINC00116Q8NCU8 138 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 CCDC112Q8NEF3 446 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 NLRP3Q96P20 1036 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 MYL10Q9BUA6 226 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 ABCF2Q9UG63 623 aa14.54□□□□□ -0.08
PUDP-201ENST00000381077 FBXO2Q9UK22 296 aaPredicted RBP14.54□□□□□ -0.08
PUDP-201ENST00000381077 PSDA5PKW4 1024 aaPredicted RBP14.53□□□□□ -0.08
PUDP-201ENST00000381077 BTBD18B2RXH4 712 aa14.53□□□□□ -0.08
PUDP-201ENST00000381077 RPS6KA4O75676 772 aa14.53□□□□□ -0.08
PUDP-201ENST00000381077 TPD52L1Q16890 204 aaPredicted RBP14.53□□□□□ -0.08
PUDP-201ENST00000381077 NYAP1Q6ZVC0 841 aa14.53□□□□□ -0.08
PUDP-201ENST00000381077 FAM177A1Q8N128 213 aaPredicted RBP14.53□□□□□ -0.08
PUDP-201ENST00000381077 BRMS1Q9HCU9 246 aa14.53□□□□□ -0.08
PUDP-201ENST00000381077 CCDC88AQ3V6T2 1871 aa14.53□□□□□ -0.08
PUDP-201ENST00000381077 GYG1P46976 350 aa14.53□□□□□ -0.08
PUDP-201ENST00000381077 TOB1P50616 345 aaPredicted RBP14.53□□□□□ -0.08
PUDP-201ENST00000381077 RPS8P62241 208 aaKnown RBP14.53□□□□□ -0.08
PUDP-201ENST00000381077 IFIT1BQ5T764 474 aaKnown RBP14.53□□□□□ -0.08
PUDP-201ENST00000381077 STK11IPQ8N1F8 1099 aa14.53□□□□□ -0.08
PUDP-201ENST00000381077 MLKLQ8NB16 471 aa14.53□□□□□ -0.08
PUDP-201ENST00000381077 PYM1Q9BRP8 204 aaKnown RBP14.53□□□□□ -0.08
PUDP-201ENST00000381077 INCENPQ9NQS7 918 aa14.53□□□□□ -0.08
PUDP-201ENST00000381077 ARPP21Q9UBL0 812 aaPredicted RBP14.53□□□□□ -0.08
PUDP-201ENST00000381077 RIOK3O14730 519 aaKnown RBP14.52□□□□□ -0.09
PUDP-201ENST00000381077 MDM2Q00987 491 aaPredicted RBP14.52□□□□□ -0.09
PUDP-201ENST00000381077 SPTY2D1Q68D10 685 aaPredicted RBP14.52□□□□□ -0.09
PUDP-201ENST00000381077 ADGRA1Q86SQ6 560 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms