RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 INCENPQ9NQS7 918 aa13.43□□□□□ -0.26
PITRM1-202ENST00000380989 HELLSQ9NRZ9 838 aa13.43□□□□□ -0.26
PITRM1-202ENST00000380989 LEMD3Q9Y2U8 911 aa13.43□□□□□ -0.26
PITRM1-202ENST00000380989 MBD4O95243 580 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 DYNLL1P63167 89 aaKnown RBP13.42□□□□□ -0.26
PITRM1-202ENST00000380989 LCORLQ8N3X6 602 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 NKX2-3Q8TAU0 364 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 MORC2Q9Y6X9 1032 aaPredicted RBP13.42□□□□□ -0.26
PITRM1-202ENST00000380989 FANCGO15287 622 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 CDK11BP21127 795 aaKnown RBP13.42□□□□□ -0.26
PITRM1-202ENST00000380989 CYP7A1P22680 504 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 ALDH1B1P30837 517 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 CCZ1BP86790 482 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 CCZ1P86791 482 aaPredicted RBP13.42□□□□□ -0.26
PITRM1-202ENST00000380989 MAP3K12Q12852 859 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 ILDR2Q71H61 639 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 CCDC125Q86Z20 511 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 KRT222Q8N1A0 295 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 DBNDD1Q9H9R9 158 aa13.42□□□□□ -0.26
PITRM1-202ENST00000380989 MYH7P12883 1935 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 GOLGA6L19H0YKK7 550 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 IQCB1Q15051 598 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 DIXDC1Q155Q3 683 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 CLSTN2Q9H4D0 955 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 CD209Q9NNX6 404 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 EVX2Q03828 476 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 STOX1Q6ZVD7 989 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 F8W031 263 aaPredicted RBP13.41□□□□□ -0.26
PITRM1-202ENST00000380989 KCNA3P22001 575 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 MECOMQ03112 1051 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 SDR42E1Q8WUS8 393 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 AIDAQ96BJ3 306 aa13.41□□□□□ -0.26
PITRM1-202ENST00000380989 MYH13Q9UKX3 1938 aa13.4□□□□□ -0.26
PITRM1-202ENST00000380989 FGAP02671 866 aa13.4□□□□□ -0.26
PITRM1-202ENST00000380989 CCDC34Q96HJ3 373 aa13.4□□□□□ -0.26
PITRM1-202ENST00000380989 DUOX1Q9NRD9 1551 aa13.4□□□□□ -0.26
PITRM1-202ENST00000380989 CHD4Q14839 1912 aa13.4□□□□□ -0.26
PITRM1-202ENST00000380989 A0A1B0GVL5 298 aa13.4□□□□□ -0.26
PITRM1-202ENST00000380989 BECN2A8MW95 431 aa13.4□□□□□ -0.26
PITRM1-202ENST00000380989 ATP2B4P23634 1241 aa13.4□□□□□ -0.26
PITRM1-202ENST00000380989 HNRNPH2P55795 449 aaKnown RBP13.4□□□□□ -0.26
PITRM1-202ENST00000380989 ZKSCAN1P17029 563 aaPredicted RBP13.4□□□□□ -0.26
PITRM1-202ENST00000380989 GTF2IP78347 998 aa13.4□□□□□ -0.26
PITRM1-202ENST00000380989 TDRD7Q8NHU6 1098 aaKnown RBP13.4□□□□□ -0.26
PITRM1-202ENST00000380989 TRIM34Q9BYJ4 488 aa13.4□□□□□ -0.26
PITRM1-202ENST00000380989 CLCN6P51797 869 aa13.39□□□□□ -0.27
PITRM1-202ENST00000380989 BLOC1S2Q6QNY1 142 aa13.39□□□□□ -0.27
PITRM1-202ENST00000380989 ZNF804AQ7Z570 1209 aa13.39□□□□□ -0.27
PITRM1-202ENST00000380989 GPHNQ9NQX3 736 aaPredicted RBP13.39□□□□□ -0.27
PITRM1-202ENST00000380989 AATFQ9NY61 560 aaKnown RBP eCLIP13.39□□□□□ -0.27
PITRM1-202ENST00000380989 RFX7Q2KHR2 1363 aa13.39□□□□□ -0.27
PITRM1-202ENST00000380989 QSER1Q2KHR3 1735 aa13.39□□□□□ -0.27
PITRM1-202ENST00000380989 H3BQV1 296 aa13.39□□□□□ -0.27
PITRM1-202ENST00000380989 ZFYP08048 801 aaPredicted RBP13.39□□□□□ -0.27
PITRM1-202ENST00000380989 UBE3CQ15386 1083 aa13.39□□□□□ -0.27
PITRM1-202ENST00000380989 IFFO2Q5TF58 517 aa13.39□□□□□ -0.27
PITRM1-202ENST00000380989 E4F1Q66K89 784 aaPredicted RBP13.39□□□□□ -0.27
PITRM1-202ENST00000380989 CCAR1Q8IX12 1150 aaKnown RBP13.39□□□□□ -0.27
PITRM1-202ENST00000380989 DHX40Q8IX18 779 aaKnown RBP13.39□□□□□ -0.27
PITRM1-202ENST00000380989 STRBPQ96SI9 672 aaKnown RBP13.39□□□□□ -0.27
PITRM1-202ENST00000380989 ZC3H12CQ9C0D7 883 aaKnown RBP13.39□□□□□ -0.27
PITRM1-202ENST00000380989 NYAP1Q6ZVC0 841 aa13.38□□□□□ -0.27
PITRM1-202ENST00000380989 NBPF11Q86T75 865 aa13.38□□□□□ -0.27
PITRM1-202ENST00000380989 NSUN4Q96CB9 384 aaKnown RBP13.38□□□□□ -0.27
PITRM1-202ENST00000380989 USP28Q96RU2 1077 aa13.38□□□□□ -0.27
PITRM1-202ENST00000380989 EPB41L4AQ9HCS5 686 aaPredicted RBP13.38□□□□□ -0.27
PITRM1-202ENST00000380989 SMC2O95347 1197 aa13.38□□□□□ -0.27
PITRM1-202ENST00000380989 AOC3Q16853 763 aa13.38□□□□□ -0.27
PITRM1-202ENST00000380989 CCAR2Q8N163 923 aaKnown RBP13.38□□□□□ -0.27
PITRM1-202ENST00000380989 ZNF397Q8NF99 534 aaPredicted RBP13.38□□□□□ -0.27
PITRM1-202ENST00000380989 ZSWIM4Q9H7M6 989 aa13.38□□□□□ -0.27
PITRM1-202ENST00000380989 DPCR1Q3MIW9 517 aa13.38□□□□□ -0.27
PITRM1-202ENST00000380989 ARHGAP29Q52LW3 1261 aa13.38□□□□□ -0.27
PITRM1-202ENST00000380989 NAA16Q6N069 864 aaPredicted RBP13.38□□□□□ -0.27
PITRM1-202ENST00000380989 DOCK2Q92608 1830 aa13.38□□□□□ -0.27
PITRM1-202ENST00000380989 LTBP1Q14766 1721 aa13.38□□□□□ -0.27
PITRM1-202ENST00000380989 CYP2D7A0A087X1C5 515 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 STYK1Q6J9G0 422 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 TMC6Q7Z403 805 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 C10orf71Q711Q0 1435 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 ANKRD65E5RJM6 399 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 TFRCP02786 760 aaKnown RBP13.37□□□□□ -0.27
PITRM1-202ENST00000380989 ATP1A3P13637 1013 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 Q6ZUG5 572 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 C7orf43Q8WVR3 580 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 MTFR1LQ9H019 292 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 PAXBP1Q9Y5B6 917 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 SLC4A4Q9Y6R1 1079 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 LRRC37AA6NMS7 1700 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 MFSD14BQ5SR56 506 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 ARMCX5Q6P1M9 558 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 NBPF3Q9H094 633 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 FHOD1Q9Y613 1164 aa13.37□□□□□ -0.27
PITRM1-202ENST00000380989 POLR3DP05423 398 aaPredicted RBP13.36□□□□□ -0.27
PITRM1-202ENST00000380989 CTDSPL2Q05D32 466 aa13.36□□□□□ -0.27
PITRM1-202ENST00000380989 SCRN1Q12765 414 aa13.36□□□□□ -0.27
PITRM1-202ENST00000380989 SKIDA1Q1XH10 827 aa13.36□□□□□ -0.27
PITRM1-202ENST00000380989 DZIP1Q86YF9 867 aaKnown RBP13.36□□□□□ -0.27
PITRM1-202ENST00000380989 SLC16A10Q8TF71 515 aa13.36□□□□□ -0.27
PITRM1-202ENST00000380989 DSCC1Q9BVC3 393 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms