RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ATP5JP18859 108 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 RAB3IL1Q8TBN0 382 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 STK24Q9Y6E0 443 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 NDC80O14777 642 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 STX10O60499 249 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 KRT9P35527 623 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 MAST3O60307 1309 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 CALUO43852 315 aaPredicted RBP17.93■□□□□ 0.46
COL2A1-202ENST00000380518 ALDH3A1P30838 453 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 CCDC14Q49A88 953 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 SLC9C1Q4G0N8 1177 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 NOX5Q96PH1 765 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 FAM169AQ9Y6X4 670 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 BRD1O95696 1058 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 TERF1P54274 439 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 POSTNQ15063 836 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 PHKBQ93100 1093 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 LZTS2Q9BRK4 669 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 CARD6Q9BX69 1037 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 GADD45BO75293 160 aaPredicted RBP17.92■□□□□ 0.46
COL2A1-202ENST00000380518 KRT5P13647 590 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 ASIC2Q16515 512 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 RIOK3O14730 519 aaKnown RBP17.92■□□□□ 0.46
COL2A1-202ENST00000380518 ATP5DP30049 168 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 CEP128Q6ZU80 1094 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 ARHGEF10LQ9HCE6 1279 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 GGA1Q9UJY5 639 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 CEP57Q86XR8 500 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 SECISBP2LQ93073 1101 aaKnown RBP17.92■□□□□ 0.46
COL2A1-202ENST00000380518 VTI1AQ96AJ9 217 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 PKD2L1Q9P0L9 805 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 JAK2O60674 1132 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 SNX29Q8TEQ0 813 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 MYL10Q9BUA6 226 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 MROH5Q6ZUA9 1318 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 GTF2A1P52655 376 aaPredicted RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 UTP14CQ5TAP6 766 aaKnown RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 SPATA5Q8NB90 893 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 RNF123Q5XPI4 1314 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 WDR62O43379 1518 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 ZAP70P43403 619 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 EIF4A1P60842 406 aaKnown RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 ZBTB9Q96C00 473 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 ZNF532Q9HCE3 1301 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 CHMP2AO43633 222 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 ERCC5P28715 1186 aaPredicted RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 HERC4Q5GLZ8 1057 aaPredicted RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 APBB1IPQ7Z5R6 666 aaPredicted RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 MAK16Q9BXY0 300 aaKnown RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 STIM2Q9P246 746 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 ARHGEF35A5YM69 484 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 MAGEA1P43355 309 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 ADCY7P51828 1080 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 AATFQ9NY61 560 aaKnown RBP eCLIP17.9■□□□□ 0.46
COL2A1-202ENST00000380518 E7EWF7 191 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 EIF6P56537 245 aaKnown RBP17.9■□□□□ 0.46
COL2A1-202ENST00000380518 CCDC84Q86UT8 332 aaPredicted RBP17.9■□□□□ 0.46
COL2A1-202ENST00000380518 AFAP1L1Q8TED9 768 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 ZNF496Q96IT1 587 aaPredicted RBP17.9■□□□□ 0.46
COL2A1-202ENST00000380518 EXOC7Q9UPT5 735 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 KIAA0556O60303 1618 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 CCDC169A6NNP5 214 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 DKC1O60832 514 aaKnown RBP eCLIP17.9■□□□□ 0.46
COL2A1-202ENST00000380518 TAF5LO75529 589 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 CTDSPL2Q05D32 466 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 TRIM7Q9C029 511 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 TAB2Q9NYJ8 693 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 NDUFB9Q9Y6M9 179 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 A6NNZ2 444 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 TUBB8Q3ZCM7 444 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 IFT20Q8IY31 132 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 IGSF3O75054 1194 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 MAP3K9P80192 1104 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 MAP7D1Q3KQU3 841 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 UBL4BQ8N7F7 174 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 CCNL1Q9UK58 526 aaPredicted RBP17.89■□□□□ 0.45
COL2A1-202ENST00000380518 IFT74Q96LB3 600 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 SLC1A4P43007 532 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 ZNF365Q70YC5 407 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 TTC16Q8NEE8 873 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 BLMP54132 1417 aaPredicted RBP17.88■□□□□ 0.45
COL2A1-202ENST00000380518 HARSP12081 509 aaKnown RBP17.88■□□□□ 0.45
COL2A1-202ENST00000380518 TTC31Q49AM3 519 aaPredicted RBP17.88■□□□□ 0.45
COL2A1-202ENST00000380518 LIN9Q5TKA1 542 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 MYRIPQ8NFW9 859 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 SSH3Q8TE77 659 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 CCDC87Q9NVE4 849 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 CLEC11AQ9Y240 323 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 ABCC4O15439 1325 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 ARID4AP29374 1257 aaPredicted RBP17.88■□□□□ 0.45
COL2A1-202ENST00000380518 MYSM1Q5VVJ2 828 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 B4GALNT4Q76KP1 1039 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 KCNJ14Q9UNX9 436 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 SSH2Q76I76 1423 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 POLD1P28340 1107 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 DNAJC10Q8IXB1 793 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 SEC62Q99442 399 aaKnown RBP17.88■□□□□ 0.45
COL2A1-202ENST00000380518 DNM3Q9UQ16 869 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 RRAGDQ9NQL2 400 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms