RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 RASA3Q14644 834 aa16.72■□□□□ 0.27
HERPUD1-203ENST00000379792 FKBP1CQ5VVH2 108 aa16.72■□□□□ 0.27
HERPUD1-203ENST00000379792 TTC6Q86TZ1 520 aa16.72■□□□□ 0.27
HERPUD1-203ENST00000379792 STAG1Q8WVM7 1258 aa16.72■□□□□ 0.27
HERPUD1-203ENST00000379792 FAM151AQ8WW52 585 aa16.72■□□□□ 0.27
HERPUD1-203ENST00000379792 IL17RAQ96F46 866 aa16.72■□□□□ 0.27
HERPUD1-203ENST00000379792 TCEANC2Q96MN5 208 aa16.72■□□□□ 0.27
HERPUD1-203ENST00000379792 TAF1DQ9H5J8 278 aaPredicted RBP16.72■□□□□ 0.27
HERPUD1-203ENST00000379792 B4E1Z4 1266 aa16.71■□□□□ 0.27
HERPUD1-203ENST00000379792 NEK4P51957 841 aa16.71■□□□□ 0.27
HERPUD1-203ENST00000379792 EAPPQ56P03 285 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-203ENST00000379792 CHST3Q7LGC8 479 aa16.71■□□□□ 0.27
HERPUD1-203ENST00000379792 ZSWIM6Q9HCJ5 1215 aa16.71■□□□□ 0.27
HERPUD1-203ENST00000379792 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
HERPUD1-203ENST00000379792 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
HERPUD1-203ENST00000379792 HLA-DOAP06340 250 aa16.7■□□□□ 0.26
HERPUD1-203ENST00000379792 SLC3A2P08195 630 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-203ENST00000379792 PSMA5P28066 241 aa16.7■□□□□ 0.26
HERPUD1-203ENST00000379792 RABEP1Q15276 862 aa16.7■□□□□ 0.26
HERPUD1-203ENST00000379792 BLOC1S2Q6QNY1 142 aa16.7■□□□□ 0.26
HERPUD1-203ENST00000379792 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
HERPUD1-203ENST00000379792 TM6SF1Q9BZW5 370 aa16.7■□□□□ 0.26
HERPUD1-203ENST00000379792 MYH1P12882 1939 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 TNNI2P48788 182 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 CDK8P49336 464 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 TRDNQ13061 729 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 PRAMEF18Q5VWM3 479 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 USP50Q70EL3 339 aaPredicted RBP16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 RALYLQ86SE5 291 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 PNMA8AQ86V59 439 aaPredicted RBP16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 CSRNP1Q96S65 589 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 DEFB129Q9H1M3 183 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 DHX36Q9H2U1 1008 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 RNF41Q9H4P4 317 aaPredicted RBP16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 CYP46A1Q9Y6A2 500 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 DDX60LQ5H9U9 1706 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 KDM4AO75164 1064 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 APLP1P51693 650 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 TNFAIP1Q13829 316 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 DLK2Q6UY11 383 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 C16orf86Q6ZW13 317 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 RUFY3Q7L099 469 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 CYB5R4Q7L1T6 521 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 LDHDQ86WU2 507 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 LRRC2Q9BYS8 371 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 MKNK2Q9HBH9 465 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 PI4KBQ9UBF8 816 aa16.69■□□□□ 0.26
HERPUD1-203ENST00000379792 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 RANBP6O60518 1105 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 RPS6KB1P23443 525 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 GABPAQ06546 454 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 PDE4BQ07343 736 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 FAM47AQ5JRC9 791 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 CHADLQ6NUI6 762 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 APOBEC3FQ8IUX4 373 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 MB21D2Q8IYB1 491 aaPredicted RBP16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 CRACR2BQ8N4Y2 399 aaPredicted RBP16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 LARP6Q9BRS8 491 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 PDRG1Q9NUG6 133 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 ZSWIM5Q9P217 1185 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 PGAP2Q9UHJ9 254 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 SERPINB13Q9UIV8 391 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 ATRNL1Q5VV63 1379 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 ROBO3Q96MS0 1386 aa16.68■□□□□ 0.26
HERPUD1-203ENST00000379792 CD2BP2O95400 341 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-203ENST00000379792 FGRP09769 529 aa16.67■□□□□ 0.26
HERPUD1-203ENST00000379792 POTEIP0CG38 1075 aa16.67■□□□□ 0.26
HERPUD1-203ENST00000379792 POTEJP0CG39 1038 aa16.67■□□□□ 0.26
HERPUD1-203ENST00000379792 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-203ENST00000379792 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-203ENST00000379792 DCPSQ96C86 337 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-203ENST00000379792 TEPSINQ96N21 525 aa16.67■□□□□ 0.26
HERPUD1-203ENST00000379792 KRT23Q9C075 422 aa16.67■□□□□ 0.26
HERPUD1-203ENST00000379792 CNNM2Q9H8M5 875 aa16.67■□□□□ 0.26
HERPUD1-203ENST00000379792 ORC4O43929 436 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 ANTXR2P58335 489 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 MIGA2Q7L4E1 593 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 ZKSCAN3Q9BRR0 538 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 DNAJC18Q9H819 358 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 GPHNQ9NQX3 736 aaPredicted RBP16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 CLEC11AQ9Y240 323 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 ADM5C9JUS6 153 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 PRC1O43663 620 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 RASA1P20936 1047 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 EXOSC10Q01780 885 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 NBPF12Q5TAG4 269 aaPredicted RBP16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 FOXP4Q8IVH2 680 aaPredicted RBP16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 ESR2Q92731 530 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 TRIM34Q9BYJ4 488 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 EHD4Q9H223 541 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 LAMB1P07942 1786 aa16.66■□□□□ 0.26
HERPUD1-203ENST00000379792 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-203ENST00000379792 MCM5P33992 734 aa16.65■□□□□ 0.26
HERPUD1-203ENST00000379792 SHMT1P34896 483 aa16.65■□□□□ 0.26
HERPUD1-203ENST00000379792 ANP32AP39687 249 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-203ENST00000379792 ZNF444Q8N0Y2 327 aaPredicted RBP16.65■□□□□ 0.26
HERPUD1-203ENST00000379792 TTC14Q96N46 770 aa16.65■□□□□ 0.26
HERPUD1-203ENST00000379792 COL2A1P02458 1487 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms