RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 ARHGEF25Q86VW2 580 aa12.27□□□□□ -0.44
USP6NL-202ENST00000379237 NSUN7Q8NE18 718 aaKnown RBP12.27□□□□□ -0.44
USP6NL-202ENST00000379237 ALG1Q9BT22 464 aa12.27□□□□□ -0.44
USP6NL-202ENST00000379237 FAM167BQ9BTA0 163 aa12.27□□□□□ -0.44
USP6NL-202ENST00000379237 SAMSN1Q9NSI8 373 aaKnown RBP12.27□□□□□ -0.44
USP6NL-202ENST00000379237 LUC7L2Q9Y383 392 aaKnown RBP12.27□□□□□ -0.44
USP6NL-202ENST00000379237 NR1D1P20393 614 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 SLC7A5Q01650 507 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.27□□□□□ -0.45
USP6NL-202ENST00000379237 ADCY10Q96PN6 1610 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 CDKL5O76039 1030 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 TRAF1Q13077 416 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 SPDYE1Q8NFV5 336 aaPredicted RBP12.27□□□□□ -0.45
USP6NL-202ENST00000379237 STK38LQ9Y2H1 464 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 TTC37Q6PGP7 1564 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 POLR2DO15514 142 aaKnown RBP12.27□□□□□ -0.45
USP6NL-202ENST00000379237 SNUPNO95149 360 aaKnown RBP12.27□□□□□ -0.45
USP6NL-202ENST00000379237 CCNHP51946 323 aaPredicted RBP12.27□□□□□ -0.45
USP6NL-202ENST00000379237 SMTNP53814 917 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 ST3GAL1Q11201 340 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 LMNTD2Q8IXW0 634 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 CCDC82Q8N4S0 544 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 TC2NQ8N9U0 490 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 CCDC47Q96A33 483 aaKnown RBP12.27□□□□□ -0.45
USP6NL-202ENST00000379237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.27□□□□□ -0.45
USP6NL-202ENST00000379237 MCM8Q9UJA3 840 aa12.27□□□□□ -0.45
USP6NL-202ENST00000379237 HGSO14964 777 aaPredicted RBP12.26□□□□□ -0.45
USP6NL-202ENST00000379237 NBPF7P0C2Y1 421 aaPredicted RBP12.26□□□□□ -0.45
USP6NL-202ENST00000379237 SEC24CP53992 1094 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 LACTBP83111 547 aaPredicted RBP12.26□□□□□ -0.45
USP6NL-202ENST00000379237 FAM69CQ0P6D2 419 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 CYB5D1Q6P9G0 228 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 KIFC2Q96AC6 838 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 EDC3Q96F86 508 aaKnown RBP12.26□□□□□ -0.45
USP6NL-202ENST00000379237 LRRD1A4D1F6 860 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 FOXO3O43524 673 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 IL13P35225 146 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 LRRC23Q53EV4 343 aaPredicted RBP12.26□□□□□ -0.45
USP6NL-202ENST00000379237 ENGASEQ8NFI3 743 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 IL17RAQ96F46 866 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 SELENOSQ9BQE4 189 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 TRIM4Q9C037 500 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 SAMD15Q9P1V8 674 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 MYO1AQ9UBC5 1043 aa12.26□□□□□ -0.45
USP6NL-202ENST00000379237 GCOM1H8Y6P7 765 aaPredicted RBP12.25□□□□□ -0.45
USP6NL-202ENST00000379237 MYZAPP0CAP1 466 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 POSTNQ15063 836 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 CCDC178Q5BJE1 867 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 KANK3Q6NY19 840 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
USP6NL-202ENST00000379237 NLRP14Q86W24 1093 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 ZNF473Q8WTR7 871 aaKnown RBP12.25□□□□□ -0.45
USP6NL-202ENST00000379237 PANX2Q96RD6 677 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 PHAXQ9H814 394 aaKnown RBP12.25□□□□□ -0.45
USP6NL-202ENST00000379237 SBNO1A3KN83 1393 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 SYNJ2O15056 1496 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 RNASE9P60153 205 aaKnown RBP12.25□□□□□ -0.45
USP6NL-202ENST00000379237 RRAGBQ5VZM2 374 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 SLC30A9Q6PML9 568 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 IFT20Q8IY31 132 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 TAF4BQ92750 862 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 BATF3Q9NR55 127 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 EPN1Q9Y6I3 576 aaPredicted RBP12.25□□□□□ -0.45
USP6NL-202ENST00000379237 AKR1B10O60218 316 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 TSGA10IPQ3SY00 556 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 MCMDC2Q4G0Z9 681 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 TBC1D1Q86TI0 1168 aaPredicted RBP12.25□□□□□ -0.45
USP6NL-202ENST00000379237 ANKRD24Q8TF21 1146 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 NSMCE1Q8WV22 266 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 CCT8L2Q96SF2 557 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 HAUS4Q9H6D7 363 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 SYNRGQ9UMZ2 1314 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 SYF2O95926 243 aaKnown RBP12.25□□□□□ -0.45
USP6NL-202ENST00000379237 EPHB4P54760 987 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 ZC3H6P61129 1189 aaKnown RBP12.25□□□□□ -0.45
USP6NL-202ENST00000379237 RAD9BQ6WBX8 426 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 TAB2Q9NYJ8 693 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
USP6NL-202ENST00000379237 VIMP08670 466 aaKnown RBP12.24□□□□□ -0.45
USP6NL-202ENST00000379237 ATP11AP98196 1134 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 KCNB1Q14721 858 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 NAA35Q5VZE5 725 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 UBLCP1Q8WVY7 318 aaPredicted RBP12.24□□□□□ -0.45
USP6NL-202ENST00000379237 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.24□□□□□ -0.45
USP6NL-202ENST00000379237 LAMC1P11047 1609 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 DDX58O95786 925 aaKnown RBP12.24□□□□□ -0.45
USP6NL-202ENST00000379237 LSP1P33241 339 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 POLE2P56282 527 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 NBPF9Q3BBW0 867 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 PARD3BQ8TEW8 1205 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 MMS19Q96T76 1030 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 VCPKMTQ9H867 229 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 ARHGEF40Q8TER5 1519 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 IRF6O14896 467 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 PAK2Q13177 524 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 PDCD2Q16342 344 aaPredicted RBP12.24□□□□□ -0.45
USP6NL-202ENST00000379237 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 KRI1Q8N9T8 703 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms