RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 PRDM1O75626 825 aa22.64■■□□□ 1.21
SSU72-204ENST00000378726 CDC27P30260 824 aa22.64■■□□□ 1.21
SSU72-204ENST00000378726 CHRNA5P30532 468 aa22.64■■□□□ 1.21
SSU72-204ENST00000378726 KRT85P78386 507 aa22.64■■□□□ 1.21
SSU72-204ENST00000378726 EVX2Q03828 476 aa22.64■■□□□ 1.21
SSU72-204ENST00000378726 RESTQ13127 1097 aa22.64■■□□□ 1.21
SSU72-204ENST00000378726 CCDC144CPQ8IYA2 1237 aa22.64■■□□□ 1.21
SSU72-204ENST00000378726 UBAC1Q9BSL1 405 aa22.64■■□□□ 1.21
SSU72-204ENST00000378726 MYL10Q9BUA6 226 aa22.64■■□□□ 1.21
SSU72-204ENST00000378726 PDGFDQ9GZP0 370 aaPredicted RBP22.64■■□□□ 1.21
SSU72-204ENST00000378726 DOK7Q18PE1 504 aa22.63■■□□□ 1.21
SSU72-204ENST00000378726 CHD4Q14839 1912 aa22.63■■□□□ 1.21
SSU72-204ENST00000378726 LTBP1Q14766 1721 aa22.63■■□□□ 1.21
SSU72-204ENST00000378726 SLC3A2P08195 630 aaKnown RBP22.63■■□□□ 1.21
SSU72-204ENST00000378726 CYP2D6P10635 497 aa22.63■■□□□ 1.21
SSU72-204ENST00000378726 CPLX2Q6PUV4 134 aaKnown RBP22.63■■□□□ 1.21
SSU72-204ENST00000378726 RTFDC1Q9BY42 306 aaPredicted RBP22.63■■□□□ 1.21
SSU72-204ENST00000378726 MKRN1Q9UHC7 482 aaKnown RBP22.63■■□□□ 1.21
SSU72-204ENST00000378726 BAZ2AQ9UIF9 1905 aaKnown RBP22.63■■□□□ 1.21
SSU72-204ENST00000378726 MAST2Q6P0Q8 1798 aa22.63■■□□□ 1.21
SSU72-204ENST00000378726 GOLGA8AA7E2F4 631 aa22.62■■□□□ 1.21
SSU72-204ENST00000378726 USP17L8P0C7I0 530 aa22.62■■□□□ 1.21
SSU72-204ENST00000378726 GPR75-ASB3A0A0A6YYF3 556 aa22.62■■□□□ 1.21
SSU72-204ENST00000378726 G3V3G9 751 aa22.62■■□□□ 1.21
SSU72-204ENST00000378726 GUCY1B3Q02153 619 aa22.62■■□□□ 1.21
SSU72-204ENST00000378726 DCAF8Q5TAQ9 597 aa22.62■■□□□ 1.21
SSU72-204ENST00000378726 SLF2Q8IX21 1173 aa22.62■■□□□ 1.21
SSU72-204ENST00000378726 TGFBRAP1Q8WUH2 860 aa22.62■■□□□ 1.21
SSU72-204ENST00000378726 FBXW7Q969H0 707 aa22.62■■□□□ 1.21
SSU72-204ENST00000378726 EYA3Q99504 573 aa22.62■■□□□ 1.21
SSU72-204ENST00000378726 FAM217BQ9NTX9 383 aaPredicted RBP22.62■■□□□ 1.21
SSU72-204ENST00000378726 TFIP11Q9UBB9 837 aaKnown RBP22.62■■□□□ 1.21
SSU72-204ENST00000378726 CDKL5O76039 1030 aa22.61■■□□□ 1.21
SSU72-204ENST00000378726 BTDP43251 543 aa22.61■■□□□ 1.21
SSU72-204ENST00000378726 UBE2HP62256 183 aa22.61■■□□□ 1.21
SSU72-204ENST00000378726 FAM163AQ96GL9 167 aaPredicted RBP22.61■■□□□ 1.21
SSU72-204ENST00000378726 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.61■■□□□ 1.21
SSU72-204ENST00000378726 COL11A2P13942 1736 aaPredicted RBP22.61■■□□□ 1.21
SSU72-204ENST00000378726 TPRNQ4KMQ1 711 aa22.61■■□□□ 1.21
SSU72-204ENST00000378726 CERS3Q8IU89 383 aa22.61■■□□□ 1.21
SSU72-204ENST00000378726 CNKSR1Q969H4 720 aa22.61■■□□□ 1.21
SSU72-204ENST00000378726 ZSCAN10Q96SZ4 725 aaPredicted RBP22.61■■□□□ 1.21
SSU72-204ENST00000378726 ZNF219Q9P2Y4 722 aaPredicted RBP22.61■■□□□ 1.21
SSU72-204ENST00000378726 TNKSO95271 1327 aa22.6■■□□□ 1.21
SSU72-204ENST00000378726 ORC4O43929 436 aa22.6■■□□□ 1.21
SSU72-204ENST00000378726 SEC23AQ15436 765 aa22.6■■□□□ 1.21
SSU72-204ENST00000378726 SLC4A8Q2Y0W8 1093 aa22.6■■□□□ 1.21
SSU72-204ENST00000378726 C12orf60Q5U649 245 aa22.6■■□□□ 1.21
SSU72-204ENST00000378726 C8orf76Q96K31 380 aa22.6■■□□□ 1.21
SSU72-204ENST00000378726 RBM10P98175 930 aaKnown RBP22.59■■□□□ 1.21
SSU72-204ENST00000378726 PDE4BQ07343 736 aa22.59■■□□□ 1.21
SSU72-204ENST00000378726 NTRK3Q16288 839 aa22.59■■□□□ 1.21
SSU72-204ENST00000378726 IQCA1Q86XH1 822 aa22.59■■□□□ 1.21
SSU72-204ENST00000378726 SCAND2PQ9GZW5 306 aaPredicted RBP22.59■■□□□ 1.21
SSU72-204ENST00000378726 PDCL3Q9H2J4 239 aa22.59■■□□□ 1.21
SSU72-204ENST00000378726 DUOX1Q9NRD9 1551 aa22.59■■□□□ 1.21
SSU72-204ENST00000378726 OTUD7BQ6GQQ9 843 aa22.58■■□□□ 1.21
SSU72-204ENST00000378726 TTC6Q86TZ1 520 aa22.58■■□□□ 1.21
SSU72-204ENST00000378726 ENAHQ8N8S7 591 aaPredicted RBP22.58■■□□□ 1.21
SSU72-204ENST00000378726 FBXO18Q8NFZ0 1043 aa22.58■■□□□ 1.21
SSU72-204ENST00000378726 PHKBQ93100 1093 aa22.58■■□□□ 1.21
SSU72-204ENST00000378726 SUGT1Q9Y2Z0 365 aa22.58■■□□□ 1.21
SSU72-204ENST00000378726 IARSP41252 1262 aaKnown RBP22.58■■□□□ 1.2
SSU72-204ENST00000378726 MAPKAPK5Q8IW41 473 aa22.58■■□□□ 1.2
SSU72-204ENST00000378726 ZNF654Q8IZM8 581 aa22.58■■□□□ 1.2
SSU72-204ENST00000378726 PTMAP06454 111 aaKnown RBP22.57■■□□□ 1.2
SSU72-204ENST00000378726 PLCG2P16885 1265 aa22.57■■□□□ 1.2
SSU72-204ENST00000378726 AMOTL1Q8IY63 956 aa22.57■■□□□ 1.2
SSU72-204ENST00000378726 TEX11Q8IYF3 940 aa22.57■■□□□ 1.2
SSU72-204ENST00000378726 FAM47AQ5JRC9 791 aa22.57■■□□□ 1.2
SSU72-204ENST00000378726 CERS5Q8N5B7 392 aa22.57■■□□□ 1.2
SSU72-204ENST00000378726 NUP133Q8WUM0 1156 aa22.57■■□□□ 1.2
SSU72-204ENST00000378726 MYH2Q9UKX2 1941 aa22.56■■□□□ 1.2
SSU72-204ENST00000378726 GAKO14976 1311 aa22.56■■□□□ 1.2
SSU72-204ENST00000378726 KIAA1551Q9HCM1 1747 aa22.56■■□□□ 1.2
SSU72-204ENST00000378726 F8W031 263 aaPredicted RBP22.56■■□□□ 1.2
SSU72-204ENST00000378726 RTN1Q16799 776 aa22.56■■□□□ 1.2
SSU72-204ENST00000378726 CCDC183Q5T5S1 534 aa22.56■■□□□ 1.2
SSU72-204ENST00000378726 IFIT1BQ5T764 474 aaKnown RBP22.56■■□□□ 1.2
SSU72-204ENST00000378726 PODNQ7Z5L7 613 aa22.56■■□□□ 1.2
SSU72-204ENST00000378726 FANCBQ8NB91 859 aa22.56■■□□□ 1.2
SSU72-204ENST00000378726 SPATA32Q96LK8 384 aa22.56■■□□□ 1.2
SSU72-204ENST00000378726 MXD3Q9BW11 206 aa22.56■■□□□ 1.2
SSU72-204ENST00000378726 GJB4Q9NTQ9 266 aa22.56■■□□□ 1.2
SSU72-204ENST00000378726 CFAP45Q9UL16 551 aa22.56■■□□□ 1.2
SSU72-204ENST00000378726 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.56■■□□□ 1.21e-16■■□□□ 11.4
SSU72-204ENST00000378726 UQCRHLA0A096LP55 91 aa22.55■■□□□ 1.2
SSU72-204ENST00000378726 POLR3DP05423 398 aaPredicted RBP22.55■■□□□ 1.2
SSU72-204ENST00000378726 UQCRHP07919 91 aa22.55■■□□□ 1.2
SSU72-204ENST00000378726 RCAN1P53805 252 aa22.55■■□□□ 1.2
SSU72-204ENST00000378726 RHBDL3P58872 404 aa22.55■■□□□ 1.2
SSU72-204ENST00000378726 ALG1Q9BT22 464 aa22.55■■□□□ 1.2
SSU72-204ENST00000378726 DBNDD1Q9H9R9 158 aa22.55■■□□□ 1.2
SSU72-204ENST00000378726 ELP1O95163 1332 aa22.55■■□□□ 1.2
SSU72-204ENST00000378726 CCDC196A0A1B0GTZ2 297 aa22.55■■□□□ 1.2
SSU72-204ENST00000378726 LEO1Q8WVC0 666 aaPredicted RBP22.55■■□□□ 1.2
SSU72-204ENST00000378726 C7orf43Q8WVR3 580 aa22.55■■□□□ 1.2
SSU72-204ENST00000378726 DYNLL2Q96FJ2 89 aa22.55■■□□□ 1.2
SSU72-204ENST00000378726 SAP30BPQ9UHR5 308 aaKnown RBP22.55■■□□□ 1.2
SSU72-204ENST00000378726 TTF2Q9UNY4 1162 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms