RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 STX10O60499 249 aa20.6■□□□□ 0.89
GNE-201ENST00000377902 ITGA6P23229 1130 aa20.6■□□□□ 0.89
GNE-201ENST00000377902 HELBQ8NG08 1087 aaPredicted RBP20.6■□□□□ 0.89
GNE-201ENST00000377902 SLC12A7Q9Y666 1083 aa20.6■□□□□ 0.89
GNE-201ENST00000377902 ECM29Q5VYK3 1845 aa20.6■□□□□ 0.89
GNE-201ENST00000377902 TFRCP02786 760 aaKnown RBP20.6■□□□□ 0.89
GNE-201ENST00000377902 PDE6AP16499 860 aa20.6■□□□□ 0.89
GNE-201ENST00000377902 RRP12Q5JTH9 1297 aaKnown RBP20.6■□□□□ 0.89
GNE-201ENST00000377902 RSRC2Q7L4I2 434 aaKnown RBP20.6■□□□□ 0.89
GNE-201ENST00000377902 OXER1Q8TDS5 423 aa20.6■□□□□ 0.89
GNE-201ENST00000377902 CCDC12Q8WUD4 166 aaPredicted RBP20.6■□□□□ 0.89
GNE-201ENST00000377902 ALS2Q96Q42 1657 aa20.6■□□□□ 0.89
GNE-201ENST00000377902 COBLO75128 1261 aa20.59■□□□□ 0.89
GNE-201ENST00000377902 CSF1RP07333 972 aa20.59■□□□□ 0.89
GNE-201ENST00000377902 SMC1AQ14683 1233 aaKnown RBP20.59■□□□□ 0.89
GNE-201ENST00000377902 ZCRB1Q8TBF4 217 aaKnown RBP20.59■□□□□ 0.89
GNE-201ENST00000377902 UBXN6Q9BZV1 441 aa20.59■□□□□ 0.89
GNE-201ENST00000377902 EPB41L4AQ9HCS5 686 aaPredicted RBP20.59■□□□□ 0.89
GNE-201ENST00000377902 CNNM1Q9NRU3 951 aa20.59■□□□□ 0.89
GNE-201ENST00000377902 AKAP11Q9UKA4 1901 aa20.59■□□□□ 0.89
GNE-201ENST00000377902 STX17P56962 302 aa20.59■□□□□ 0.89
GNE-201ENST00000377902 KLHL10Q6JEL2 608 aa20.59■□□□□ 0.89
GNE-201ENST00000377902 STRBPQ96SI9 672 aaKnown RBP20.59■□□□□ 0.89
GNE-201ENST00000377902 CALCOCO1Q9P1Z2 691 aa20.59■□□□□ 0.89
GNE-201ENST00000377902 MMP1P03956 469 aa20.58■□□□□ 0.89
GNE-201ENST00000377902 SARSP49591 514 aaKnown RBP20.58■□□□□ 0.89
GNE-201ENST00000377902 MORC3Q14149 939 aa20.58■□□□□ 0.89
GNE-201ENST00000377902 GPR161Q8N6U8 529 aaKnown RBP20.58■□□□□ 0.89
GNE-201ENST00000377902 AIDAQ96BJ3 306 aa20.58■□□□□ 0.89
GNE-201ENST00000377902 TMEM87BQ96K49 555 aa20.58■□□□□ 0.89
GNE-201ENST00000377902 RAI14Q9P0K7 980 aa20.58■□□□□ 0.89
GNE-201ENST00000377902 MYH7P12883 1935 aa20.58■□□□□ 0.89
GNE-201ENST00000377902 HLFQ16534 295 aa20.58■□□□□ 0.88
GNE-201ENST00000377902 TOMM22Q9NS69 142 aa20.58■□□□□ 0.88
GNE-201ENST00000377902 PUF60Q9UHX1 559 aaKnown RBP20.58■□□□□ 0.88
GNE-201ENST00000377902 PRKAB2O43741 272 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 FMNL1O95466 1100 aaPredicted RBP20.57■□□□□ 0.88
GNE-201ENST00000377902 PTPREP23469 700 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 NR1I3Q14994 352 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 TTLL11Q8NHH1 800 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 ENOX1Q8TC92 643 aaKnown RBP20.57■□□□□ 0.88
GNE-201ENST00000377902 KCPQ6ZWJ8 1503 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 TCRBV5S4A2TA0A5A2 114 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 FAM205CA6NFA0 338 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 PCCAP05165 728 aaPredicted RBP20.57■□□□□ 0.88
GNE-201ENST00000377902 CAPN2P17655 700 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 RAD9BQ6WBX8 426 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 SGMS1Q86VZ5 419 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 SMYD4Q8IYR2 804 aaPredicted RBP20.57■□□□□ 0.88
GNE-201ENST00000377902 FUT8Q9BYC5 575 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 CSRNP2Q9H175 543 aa20.57■□□□□ 0.88
GNE-201ENST00000377902 TPM1P09493 284 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 AFMP43652 599 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 TOM1L2Q6ZVM7 507 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 ZBTB38Q8NAP3 1195 aaPredicted RBP20.56■□□□□ 0.88
GNE-201ENST00000377902 BBXQ8WY36 941 aaPredicted RBP20.56■□□□□ 0.88
GNE-201ENST00000377902 ARMT1Q9H993 441 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 ARFGAP3Q9NP61 516 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 PKD1L3Q7Z443 1732 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 A0A087X0B3 334 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 ABL1P00519 1130 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 RBL2Q08999 1139 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 UBE3CQ15386 1083 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 IFNL3Q8IZI9 196 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 MLKLQ8NB16 471 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 CABP5Q9NP86 173 aa20.56■□□□□ 0.88
GNE-201ENST00000377902 ACTN4O43707 911 aaKnown RBP20.55■□□□□ 0.88
GNE-201ENST00000377902 CD44P16070 742 aaKnown RBP20.55■□□□□ 0.88
GNE-201ENST00000377902 NT5DC1Q5TFE4 455 aa20.55■□□□□ 0.88
GNE-201ENST00000377902 MYO1BO43795 1136 aa20.55■□□□□ 0.88
GNE-201ENST00000377902 MBD4O95243 580 aa20.55■□□□□ 0.88
GNE-201ENST00000377902 NUTM2AQ8IVF1 878 aaPredicted RBP20.55■□□□□ 0.88
GNE-201ENST00000377902 MAGEB6Q8N7X4 407 aa20.55■□□□□ 0.88
GNE-201ENST00000377902 NAPBQ9H115 298 aa20.55■□□□□ 0.88
GNE-201ENST00000377902 FBXO3Q9UK99 471 aa20.55■□□□□ 0.88
GNE-201ENST00000377902 PCDH11XQ9BZA7 1347 aa20.55■□□□□ 0.88
GNE-201ENST00000377902 PCDH11YQ9BZA8 1340 aa20.55■□□□□ 0.88
GNE-201ENST00000377902 hCG_1642624A0A1W2PR95 340 aa20.54■□□□□ 0.88
GNE-201ENST00000377902 H3BQF6 201 aa20.54■□□□□ 0.88
GNE-201ENST00000377902 GTF2E1P29083 439 aaPredicted RBP20.54■□□□□ 0.88
GNE-201ENST00000377902 DNAJC10Q8IXB1 793 aa20.54■□□□□ 0.88
GNE-201ENST00000377902 VGLL2Q8N8G2 317 aa20.54■□□□□ 0.88
GNE-201ENST00000377902 NUP133Q8WUM0 1156 aa20.54■□□□□ 0.88
GNE-201ENST00000377902 EPSTI1Q96J88 318 aa20.54■□□□□ 0.88
GNE-201ENST00000377902 HOOK1Q9UJC3 728 aaKnown RBP20.54■□□□□ 0.88
GNE-201ENST00000377902 GOLGA6L9A6NEM1 432 aa20.54■□□□□ 0.88
GNE-201ENST00000377902 ERVV-2B6SEH9 535 aa20.54■□□□□ 0.88
GNE-201ENST00000377902 IFNAR1P17181 557 aa20.54■□□□□ 0.88
GNE-201ENST00000377902 FAM193AP78312 1265 aa20.54■□□□□ 0.88
GNE-201ENST00000377902 MAPK8IP2Q13387 824 aaPredicted RBP20.54■□□□□ 0.88
GNE-201ENST00000377902 SAFBQ15424 915 aaKnown RBP eCLIP20.54■□□□□ 0.88
GNE-201ENST00000377902 APTXQ7Z2E3 356 aaKnown RBP20.54■□□□□ 0.88
GNE-201ENST00000377902 GOLGA1Q92805 767 aa20.54■□□□□ 0.88
GNE-201ENST00000377902 AKR1B15C9JRZ8 316 aaPredicted RBP20.53■□□□□ 0.88
GNE-201ENST00000377902 SMIM22K7EJ46 135 aa20.53■□□□□ 0.88
GNE-201ENST00000377902 LONRF2Q1L5Z9 754 aa20.53■□□□□ 0.88
GNE-201ENST00000377902 RABGGTAQ92696 567 aa20.53■□□□□ 0.88
GNE-201ENST00000377902 SHISA4Q96DD7 197 aa20.53■□□□□ 0.88
GNE-201ENST00000377902 ATF3P18847 181 aa20.53■□□□□ 0.88
GNE-201ENST00000377902 LIFRP42702 1097 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms