RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CDHR2Q9BYE9 1310 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 AS3MTQ9HBK9 375 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 ATP8A2Q9NTI2 1148 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 ZNRF3Q9ULT6 936 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 CIZ1Q9ULV3 898 aaPredicted RBP9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 ATP6V0A2Q9Y487 856 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 PPLO60437 1756 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 AOX1Q06278 1338 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 DDX39AO00148 427 aaKnown RBP9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 CYP2E1P05181 493 aaPredicted RBP9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 CCDC192P0DO97 292 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 MCM4P33991 863 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 ADD2P35612 726 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 FAM173BQ6P4H8 233 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 ARMC9Q7Z3E5 817 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 NCAPG2Q86XI2 1143 aa9.7□□□□□ -0.86
CRNKL1-202ENST00000377340 UBN2Q6ZU65 1347 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 SCARF1Q14162 830 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 SLFN13Q68D06 897 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 PAF1Q8N7H5 531 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 CRAMP1Q96RY5 1269 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 GPBP1L1Q9HC44 474 aaPredicted RBP9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 NOD1Q9Y239 953 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 POLA2Q14181 598 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 SF3B3Q15393 1217 aaKnown RBP9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 ZNF174Q15697 407 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 ODF2Q5BJF6 829 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 MICALL2Q8IY33 904 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 CHURC1Q8WUH1 139 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 DSCC1Q9BVC3 393 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 RBM27Q9P2N5 1060 aaKnown RBP9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 ZNF654Q8IZM8 581 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 ANKRD35Q8N283 1001 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 SPC24Q8NBT2 197 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 SH3RF3Q8TEJ3 882 aaPredicted RBP9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 PI4KBQ9UBF8 816 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 CEMIPQ8WUJ3 1361 aa9.69□□□□□ -0.86
CRNKL1-202ENST00000377340 NEURL4Q96JN8 1562 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 MYO5BQ9ULV0 1848 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 KLRF2D3W0D1 207 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 M0R2C6 588 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 SLC4A9Q96Q91 983 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 GPHNQ9NQX3 736 aaPredicted RBP9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 KCNJ14Q9UNX9 436 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 PLSCR1O15162 318 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 SLC16A2P36021 539 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 SYCP1Q15431 976 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 ENOX2Q16206 610 aaKnown RBP9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 ZMYM1Q5SVZ6 1142 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 PIK3AP1Q6ZUJ8 805 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 SAMD7Q7Z3H4 446 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 SYCP3Q8IZU3 236 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 SLC44A5Q8NCS7 719 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 TNPO1Q92973 898 aaKnown RBP9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 WRNIP1Q96S55 665 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 RIPOR2Q9Y4F9 1068 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 CYP2D6P10635 497 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 CA8P35219 290 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 DNM1Q05193 864 aaKnown RBP9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 TCERG1LQ5VWI1 586 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 SEPT11Q9NVA2 429 aaKnown RBP9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 VPS54Q9P1Q0 977 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 KDM2BQ8NHM5 1336 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 SYCE3A1L190 88 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 ZNF827Q17R98 1081 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 KCTD1Q719H9 257 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 C2orf69Q8N8R5 385 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 ERMNQ8TAM6 284 aa9.68□□□□□ -0.86
CRNKL1-202ENST00000377340 GH2P01242 217 aa9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 KRT2P35908 639 aa9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 IREB2P48200 963 aaKnown RBP9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 BICD1Q96G01 975 aa9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 ZSCAN10Q96SZ4 725 aaPredicted RBP9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 TSPY26PQ9H489 355 aa9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 RBM28Q9NW13 759 aaKnown RBP9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 NOP56O00567 594 aaKnown RBP9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 JAK2O60674 1132 aa9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 ARID4AP29374 1257 aaPredicted RBP9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 FHDC1Q9C0D6 1143 aaPredicted RBP9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 INCENPQ9NQS7 918 aa9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 ZHX2Q9Y6X8 837 aa9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 CYP21A2P08686 494 aa9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 ZSCAN22P10073 491 aaPredicted RBP9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 MAP3K11Q16584 847 aa9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 C9orf131Q5VYM1 1079 aa9.67□□□□□ -0.86
CRNKL1-202ENST00000377340 UBR1Q8IWV7 1749 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 IQCA1LA6NCM1 817 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 TBCAO75347 108 aaKnown RBP9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 KIF4BQ2VIQ3 1234 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 DIS3L2Q8IYB7 885 aaKnown RBP9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 RASEFQ8IZ41 740 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 PXDNQ92626 1479 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 HSP90AA4PQ58FG1 418 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 CCDC17Q96LX7 622 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 STAP2Q9UGK3 403 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 CNPY2Q9Y2B0 182 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 TESPA1A2RU30 521 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms