RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 IQCA1Q86XH1 822 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 SLF2Q8IX21 1173 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 TMTC2Q8N394 836 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 CNKSR1Q969H4 720 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 C8orf76Q96K31 380 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 ZSCAN16Q9H4T2 348 aaPredicted RBP15.09■□□□□ 0.01
TRIM40-206ENST00000376724 GJB4Q9NTQ9 266 aa15.09■□□□□ 0.01
TRIM40-206ENST00000376724 FAM217BQ9NTX9 383 aaPredicted RBP15.09■□□□□ 0.01
TRIM40-206ENST00000376724 MKRN1Q9UHC7 482 aaKnown RBP15.09■□□□□ 0.01
TRIM40-206ENST00000376724 KIAA1551Q9HCM1 1747 aa15.08■□□□□ 0.01
TRIM40-206ENST00000376724 GPR75-ASB3A0A0A6YYF3 556 aa15.08■□□□□ 0
TRIM40-206ENST00000376724 FGRP09769 529 aa15.08■□□□□ 0
TRIM40-206ENST00000376724 PCP11498 1178 aaKnown RBP15.08■□□□□ 0
TRIM40-206ENST00000376724 AMOTL1Q8IY63 956 aa15.08■□□□□ 0
TRIM40-206ENST00000376724 TEX11Q8IYF3 940 aa15.08■□□□□ 0
TRIM40-206ENST00000376724 CERS5Q8N5B7 392 aa15.08■□□□□ 0
TRIM40-206ENST00000376724 ENAHQ8N8S7 591 aaPredicted RBP15.08■□□□□ 0
TRIM40-206ENST00000376724 DYNLL2Q96FJ2 89 aa15.08■□□□□ 0
TRIM40-206ENST00000376724 MTA3Q9BTC8 594 aa15.08■□□□□ 0
TRIM40-206ENST00000376724 KCNQ5Q9NR82 932 aa15.08■□□□□ 0
TRIM40-206ENST00000376724 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.08■□□□□ 0
TRIM40-206ENST00000376724 SLX4Q8IY92 1834 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 NMT2O60551 498 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 POLR3DP05423 398 aaPredicted RBP15.07■□□□□ 0
TRIM40-206ENST00000376724 IARSP41252 1262 aaKnown RBP15.07■□□□□ 0
TRIM40-206ENST00000376724 UBE2HP62256 183 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 SEC23AQ15436 765 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 IFIT1BQ5T764 474 aaKnown RBP15.07■□□□□ 0
TRIM40-206ENST00000376724 C12orf60Q5U649 245 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 TTC6Q86TZ1 520 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 GAS2L3Q86XJ1 694 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 ZNF654Q8IZM8 581 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 CCDC82Q8N4S0 544 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 AIFM3Q96NN9 605 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 ORC4O43929 436 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 CEBPZQ03701 1054 aaKnown RBP15.07■□□□□ 0
TRIM40-206ENST00000376724 RTN1Q16799 776 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 CMTR1Q8N1G2 835 aaKnown RBP15.07■□□□□ 0
TRIM40-206ENST00000376724 SPATA32Q96LK8 384 aa15.07■□□□□ 0
TRIM40-206ENST00000376724 TTF2Q9UNY4 1162 aaKnown RBP15.07■□□□□ 0
TRIM40-206ENST00000376724 FSD2A1L4K1 749 aa15.06■□□□□ 0
TRIM40-206ENST00000376724 TSPY2A6NKD2 308 aa15.06■□□□□ 0
TRIM40-206ENST00000376724 PLCG2P16885 1265 aa15.06■□□□□ 0
TRIM40-206ENST00000376724 SCNN1DP51172 638 aa15.06■□□□□ 0
TRIM40-206ENST00000376724 NTRK3Q16288 839 aa15.06■□□□□ 0
TRIM40-206ENST00000376724 FAM163AQ96GL9 167 aaPredicted RBP15.06■□□□□ 0
TRIM40-206ENST00000376724 ALG1Q9BT22 464 aa15.06■□□□□ 0
TRIM40-206ENST00000376724 SLC26A6Q9BXS9 759 aa15.06■□□□□ 0
TRIM40-206ENST00000376724 DAGLAQ9Y4D2 1042 aa15.06■□□□□ 0
TRIM40-206ENST00000376724 LAMB1P07942 1786 aa15.06■□□□□ 0
TRIM40-206ENST00000376724 QSER1Q2KHR3 1735 aa15.06■□□□□ 0
TRIM40-206ENST00000376724 UBE2Q2LH0YL09 131 aa15.05■□□□□ 0
TRIM40-206ENST00000376724 C21orf2O43822 256 aa15.05■□□□□ 0
TRIM40-206ENST00000376724 PLCD1P51178 756 aa15.05■□□□□ 0
TRIM40-206ENST00000376724 SSRP1Q08945 709 aaKnown RBP15.05■□□□□ 0
TRIM40-206ENST00000376724 L1TD1Q5T7N2 865 aaKnown RBP15.05■□□□□ 0
TRIM40-206ENST00000376724 CERS3Q8IU89 383 aa15.05■□□□□ 0
TRIM40-206ENST00000376724 FANCBQ8NB91 859 aa15.05■□□□□ 0
TRIM40-206ENST00000376724 FBXO18Q8NFZ0 1043 aa15.05■□□□□ 0
TRIM40-206ENST00000376724 SCAND2PQ9GZW5 306 aaPredicted RBP15.05■□□□□ 0
TRIM40-206ENST00000376724 MKNK2Q9HBH9 465 aa15.05■□□□□ 0
TRIM40-206ENST00000376724 GAKO14976 1311 aa15.05■□□□□ -0
TRIM40-206ENST00000376724 RHBDL3P58872 404 aa15.05■□□□□ -0
TRIM40-206ENST00000376724 PODNQ7Z5L7 613 aa15.05■□□□□ -0
TRIM40-206ENST00000376724 FLT1P17948 1338 aa15.04■□□□□ -0
TRIM40-206ENST00000376724 SYCE3A1L190 88 aa15.04■□□□□ -0
TRIM40-206ENST00000376724 ECE2O60344 883 aa15.04■□□□□ -0
TRIM40-206ENST00000376724 TFAP4Q01664 338 aa15.04■□□□□ -0
TRIM40-206ENST00000376724 PICALMQ13492 652 aa15.04■□□□□ -0
TRIM40-206ENST00000376724 AOC3Q16853 763 aa15.04■□□□□ -0
TRIM40-206ENST00000376724 CATIPQ7Z7H3 387 aa15.04■□□□□ -0
TRIM40-206ENST00000376724 SLC44A5Q8NCS7 719 aa15.04■□□□□ -0
TRIM40-206ENST00000376724 LEO1Q8WVC0 666 aaPredicted RBP15.04■□□□□ -0
TRIM40-206ENST00000376724 FTOQ9C0B1 505 aaKnown RBP eCLIP15.04■□□□□ -0
TRIM40-206ENST00000376724 GOLGB1Q14789 3259 aaKnown RBP15.04■□□□□ -0
TRIM40-206ENST00000376724 C7orf43Q8WVR3 580 aa15.04■□□□□ -0
TRIM40-206ENST00000376724 SYAP1Q96A49 352 aaPredicted RBP15.04■□□□□ -0
TRIM40-206ENST00000376724 CFAP45Q9UL16 551 aa15.04■□□□□ -0
TRIM40-206ENST00000376724 SUGT1Q9Y2Z0 365 aa15.04■□□□□ -0
TRIM40-206ENST00000376724 CCDC196A0A1B0GTZ2 297 aa15.03■□□□□ -0
TRIM40-206ENST00000376724 GOLGA6L4A6NEF3 574 aa15.03■□□□□ -0
TRIM40-206ENST00000376724 FMNL1O95466 1100 aaPredicted RBP15.03■□□□□ -0
TRIM40-206ENST00000376724 IFNAR1P17181 557 aa15.03■□□□□ -0
TRIM40-206ENST00000376724 ILDR1Q86SU0 546 aaPredicted RBP15.03■□□□□ -0
TRIM40-206ENST00000376724 NAV1Q8NEY1 1877 aa15.03■□□□□ -0
TRIM40-206ENST00000376724 GUCY1A2P33402 732 aa15.02■□□□□ -0
TRIM40-206ENST00000376724 ZNF445P59923 1031 aa15.02■□□□□ -0
TRIM40-206ENST00000376724 KIAA0825Q8IV33 1275 aa15.02■□□□□ -0
TRIM40-206ENST00000376724 TRIM22Q8IYM9 498 aa15.02■□□□□ -0
TRIM40-206ENST00000376724 ZNF444Q8N0Y2 327 aaPredicted RBP15.02■□□□□ -0
TRIM40-206ENST00000376724 GRPEL1Q9HAV7 217 aa15.02■□□□□ -0
TRIM40-206ENST00000376724 NID2Q14112 1375 aa15.02■□□□□ -0
TRIM40-206ENST00000376724 ELP1O95163 1332 aa15.02□□□□□ -0.01
TRIM40-206ENST00000376724 ZBTB7AO95365 584 aa15.02□□□□□ -0.01
TRIM40-206ENST00000376724 TSPY3P0CV98 308 aa15.02□□□□□ -0.01
TRIM40-206ENST00000376724 TSPY8P0CW00 308 aa15.02□□□□□ -0.01
TRIM40-206ENST00000376724 XRCC6P12956 609 aaKnown RBP eCLIP15.02□□□□□ -0.01
TRIM40-206ENST00000376724 TRIM29Q14134 588 aa15.02□□□□□ -0.01
TRIM40-206ENST00000376724 KRT40Q6A162 431 aa15.02□□□□□ -0.01
TRIM40-206ENST00000376724 TTLL6Q8N841 843 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms