RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 SNRKQ9NRH2 765 aa18.39■□□□□ 0.53
CLCN6-204ENST00000376491 LRP2BPQ9P2M1 347 aa18.39■□□□□ 0.53
CLCN6-204ENST00000376491 AGTPBP1Q9UPW5 1226 aa18.39■□□□□ 0.53
CLCN6-204ENST00000376491 FPGT-TNNI3KV9GXZ4 949 aa18.39■□□□□ 0.53
CLCN6-204ENST00000376491 LOC285556D6RIA3 1793 aa18.39■□□□□ 0.53
CLCN6-204ENST00000376491 MAST2Q6P0Q8 1798 aa18.38■□□□□ 0.53
CLCN6-204ENST00000376491 H0YGN5 161 aa18.38■□□□□ 0.53
CLCN6-204ENST00000376491 CAP2P40123 477 aa18.38■□□□□ 0.53
CLCN6-204ENST00000376491 FLT3LGP49771 235 aa18.38■□□□□ 0.53
CLCN6-204ENST00000376491 ATP8B2P98198 1209 aa18.38■□□□□ 0.53
CLCN6-204ENST00000376491 SPP2Q13103 211 aa18.38■□□□□ 0.53
CLCN6-204ENST00000376491 UBE2Q1Q7Z7E8 422 aa18.38■□□□□ 0.53
CLCN6-204ENST00000376491 TEX11Q8IYF3 940 aa18.38■□□□□ 0.53
CLCN6-204ENST00000376491 SSH3Q8TE77 659 aa18.38■□□□□ 0.53
CLCN6-204ENST00000376491 SMCR8Q8TEV9 937 aaPredicted RBP18.38■□□□□ 0.53
CLCN6-204ENST00000376491 RNF208Q9H0X6 261 aa18.38■□□□□ 0.53
CLCN6-204ENST00000376491 GPR108Q9NPR9 543 aa18.38■□□□□ 0.53
CLCN6-204ENST00000376491 BIN2Q9UBW5 565 aaPredicted RBP18.38■□□□□ 0.53
CLCN6-204ENST00000376491 COLQQ9Y215 455 aaPredicted RBP18.38■□□□□ 0.53
CLCN6-204ENST00000376491 UBXN2AP68543 259 aa18.37■□□□□ 0.53
CLCN6-204ENST00000376491 ADGRA1Q86SQ6 560 aa18.37■□□□□ 0.53
CLCN6-204ENST00000376491 ANKRD13CQ8N6S4 541 aa18.37■□□□□ 0.53
CLCN6-204ENST00000376491 SLAIN1Q8ND83 568 aa18.37■□□□□ 0.53
CLCN6-204ENST00000376491 NKX2-3Q8TAU0 364 aa18.37■□□□□ 0.53
CLCN6-204ENST00000376491 UNC93B1Q9H1C4 597 aa18.37■□□□□ 0.53
CLCN6-204ENST00000376491 C1orf115Q9H7X2 142 aa18.37■□□□□ 0.53
CLCN6-204ENST00000376491 AATFQ9NY61 560 aaKnown RBP eCLIP18.37■□□□□ 0.53
CLCN6-204ENST00000376491 FOCADQ5VW36 1801 aa18.37■□□□□ 0.53
CLCN6-204ENST00000376491 ADCY3O60266 1144 aa18.36■□□□□ 0.53
CLCN6-204ENST00000376491 FXR1P51114 621 aaKnown RBP eCLIP18.36■□□□□ 0.53
CLCN6-204ENST00000376491 TTC39AQ5SRH9 613 aa18.36■□□□□ 0.53
CLCN6-204ENST00000376491 NAA16Q6N069 864 aaPredicted RBP18.36■□□□□ 0.53
CLCN6-204ENST00000376491 PROCA1Q8NCQ7 364 aaPredicted RBP18.36■□□□□ 0.53
CLCN6-204ENST00000376491 ZNF280CQ8ND82 737 aa18.36■□□□□ 0.53
CLCN6-204ENST00000376491 TNPO2O14787 897 aaKnown RBP18.35■□□□□ 0.53
CLCN6-204ENST00000376491 SURF6O75683 361 aaKnown RBP18.35■□□□□ 0.53
CLCN6-204ENST00000376491 CYP2E1P05181 493 aaPredicted RBP18.35■□□□□ 0.53
CLCN6-204ENST00000376491 ELNP15502 786 aa18.35■□□□□ 0.53
CLCN6-204ENST00000376491 HMGCS2P54868 508 aa18.35■□□□□ 0.53
CLCN6-204ENST00000376491 PPP4CP60510 307 aa18.35■□□□□ 0.53
CLCN6-204ENST00000376491 IRF5Q13568 498 aa18.35■□□□□ 0.53
CLCN6-204ENST00000376491 U2AF1L4Q8WU68 220 aaKnown RBP18.35■□□□□ 0.53
CLCN6-204ENST00000376491 HERC5Q9UII4 1024 aaKnown RBP18.35■□□□□ 0.53
CLCN6-204ENST00000376491 USP17L5A8MUK1 530 aa18.34■□□□□ 0.53
CLCN6-204ENST00000376491 RLBP1P12271 317 aa18.34■□□□□ 0.53
CLCN6-204ENST00000376491 JAG1P78504 1218 aa18.34■□□□□ 0.53
CLCN6-204ENST00000376491 OS9Q13438 667 aaPredicted RBP18.34■□□□□ 0.53
CLCN6-204ENST00000376491 FAM110CQ1W6H9 321 aa18.34■□□□□ 0.53
CLCN6-204ENST00000376491 CCDC158Q5M9N0 1113 aa18.34■□□□□ 0.53
CLCN6-204ENST00000376491 PXYLP1Q8TE99 480 aa18.34■□□□□ 0.53
CLCN6-204ENST00000376491 TGFBRAP1Q8WUH2 860 aa18.34■□□□□ 0.53
CLCN6-204ENST00000376491 DNAJC18Q9H819 358 aa18.34■□□□□ 0.53
CLCN6-204ENST00000376491 PI4KBQ9UBF8 816 aa18.34■□□□□ 0.53
CLCN6-204ENST00000376491 PNMA3Q9UL41 463 aa18.34■□□□□ 0.53
CLCN6-204ENST00000376491 NOP58Q9Y2X3 529 aaKnown RBP18.34■□□□□ 0.53
CLCN6-204ENST00000376491 TRIOBPQ9H2D6 2365 aa18.34■□□□□ 0.53
CLCN6-204ENST00000376491 BAG3O95817 575 aa18.33■□□□□ 0.52
CLCN6-204ENST00000376491 INHAP05111 366 aa18.33■□□□□ 0.52
CLCN6-204ENST00000376491 ZAP70P43403 619 aa18.33■□□□□ 0.52
CLCN6-204ENST00000376491 SH3D19Q5HYK7 790 aa18.33■□□□□ 0.52
CLCN6-204ENST00000376491 MAPKAPK5Q8IW41 473 aa18.33■□□□□ 0.52
CLCN6-204ENST00000376491 DPF3Q92784 378 aa18.33■□□□□ 0.52
CLCN6-204ENST00000376491 ZNF512BQ96KM6 892 aaPredicted RBP18.33■□□□□ 0.52
CLCN6-204ENST00000376491 NOL10Q9BSC4 688 aaKnown RBP18.33■□□□□ 0.52
CLCN6-204ENST00000376491 TBC1D2Q9BYX2 928 aa18.33■□□□□ 0.52
CLCN6-204ENST00000376491 PIH1D3Q9NQM4 214 aaKnown RBP18.33■□□□□ 0.52
CLCN6-204ENST00000376491 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.52
CLCN6-204ENST00000376491 DBNLQ9UJU6 430 aaKnown RBP18.33■□□□□ 0.52
CLCN6-204ENST00000376491 FLT1P17948 1338 aa18.32■□□□□ 0.52
CLCN6-204ENST00000376491 ZBTB7BO15156 539 aaPredicted RBP18.32■□□□□ 0.52
CLCN6-204ENST00000376491 SGPL1O95470 568 aa18.32■□□□□ 0.52
CLCN6-204ENST00000376491 PLCG2P16885 1265 aa18.32■□□□□ 0.52
CLCN6-204ENST00000376491 SHROOM1Q2M3G4 852 aaPredicted RBP18.32■□□□□ 0.52
CLCN6-204ENST00000376491 ASCC2Q9H1I8 757 aaPredicted RBP18.32■□□□□ 0.52
CLCN6-204ENST00000376491 DHX36Q9H2U1 1008 aaKnown RBP18.32■□□□□ 0.52
CLCN6-204ENST00000376491 PLXNB2O15031 1838 aa18.31■□□□□ 0.52
CLCN6-204ENST00000376491 METTL16Q86W50 562 aaKnown RBP18.31■□□□□ 0.52
CLCN6-204ENST00000376491 COA7Q96BR5 231 aa18.31■□□□□ 0.52
CLCN6-204ENST00000376491 EAF2Q96CJ1 260 aaPredicted RBP18.31■□□□□ 0.52
CLCN6-204ENST00000376491 WDR18Q9BV38 432 aa18.31■□□□□ 0.52
CLCN6-204ENST00000376491 CCDC8Q9H0W5 538 aaPredicted RBP18.31■□□□□ 0.52
CLCN6-204ENST00000376491 AS3MTQ9HBK9 375 aa18.31■□□□□ 0.52
CLCN6-204ENST00000376491 PALD1Q9ULE6 856 aa18.31■□□□□ 0.52
CLCN6-204ENST00000376491 MYH1P12882 1939 aa18.31■□□□□ 0.52
CLCN6-204ENST00000376491 FARP2O94887 1054 aaPredicted RBP18.3■□□□□ 0.52
CLCN6-204ENST00000376491 GCLCP48506 637 aaPredicted RBP18.3■□□□□ 0.52
CLCN6-204ENST00000376491 DYNLL1P63167 89 aaKnown RBP18.3■□□□□ 0.52
CLCN6-204ENST00000376491 HNRNPUQ00839 825 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLCN6-204ENST00000376491 MTMR2Q13614 643 aa18.3■□□□□ 0.52
CLCN6-204ENST00000376491 FOXP4Q8IVH2 680 aaPredicted RBP18.3■□□□□ 0.52
CLCN6-204ENST00000376491 ITPRIPQ8IWB1 547 aa18.3■□□□□ 0.52
CLCN6-204ENST00000376491 TAOK2Q9UL54 1235 aa18.3■□□□□ 0.52
CLCN6-204ENST00000376491 ASNSP08243 561 aa18.29■□□□□ 0.52
CLCN6-204ENST00000376491 BACE1P56817 501 aa18.29■□□□□ 0.52
CLCN6-204ENST00000376491 PABPC4Q13310 644 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLCN6-204ENST00000376491 CHRDL2Q6WN34 429 aa18.29■□□□□ 0.52
CLCN6-204ENST00000376491 FTSJ3Q8IY81 847 aaKnown RBP18.29■□□□□ 0.52
CLCN6-204ENST00000376491 DEFB118Q96PH6 123 aa18.29■□□□□ 0.52
CLCN6-204ENST00000376491 HTATIP2Q9BUP3 242 aa18.29■□□□□ 0.52
CLCN6-204ENST00000376491 PAK6Q9NQU5 681 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms