RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 TSPYL1Q9H0U9 437 aa13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 RRP15Q9Y3B9 282 aaKnown RBP13.13□□□□□ -0.31
TM9SF2-201ENST00000376387 CCDC151A5D8V7 595 aa13.12□□□□□ -0.31
TM9SF2-201ENST00000376387 RANBP6O60518 1105 aaKnown RBP13.12□□□□□ -0.31
TM9SF2-201ENST00000376387 RHOXF2BP0C7M4 288 aa13.12□□□□□ -0.31
TM9SF2-201ENST00000376387 AK7Q96M32 723 aa13.12□□□□□ -0.31
TM9SF2-201ENST00000376387 RHOXF2Q9BQY4 288 aa13.12□□□□□ -0.31
TM9SF2-201ENST00000376387 ABCB6Q9NP58 842 aa13.12□□□□□ -0.31
TM9SF2-201ENST00000376387 SERTAD1Q9UHV2 236 aa13.12□□□□□ -0.31
TM9SF2-201ENST00000376387 FAN1Q9Y2M0 1017 aa13.12□□□□□ -0.31
TM9SF2-201ENST00000376387 ANKRD65E5RJM6 399 aa13.12□□□□□ -0.31
TM9SF2-201ENST00000376387 SRGAP1Q7Z6B7 1085 aa13.12□□□□□ -0.31
TM9SF2-201ENST00000376387 TBC1D10CQ8IV04 446 aa13.12□□□□□ -0.31
TM9SF2-201ENST00000376387 H7C1W4 665 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 ZNF213O14771 459 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 PHACTR2O75167 634 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 ACTN2P35609 894 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 ZAP70P43403 619 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 METAP2P50579 478 aaKnown RBP eCLIP13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 SLC9C2Q5TAH2 1124 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 TTLL7Q6ZT98 887 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 RAI14Q9P0K7 980 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 ADAMTS7Q9UKP4 1686 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 GOLGA6L9A6NEM1 432 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 EYA2O00167 538 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 POLR2DO15514 142 aaKnown RBP13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 COBLO75128 1261 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 SNRPA1P09661 255 aaKnown RBP13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 IL15P40933 162 aaPredicted RBP13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 RBL2Q08999 1139 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 NR1I3Q14994 352 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 TTC39AQ5SRH9 613 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 USP49Q70CQ1 688 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 PLEKHA4Q9H4M7 779 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 ADGRG1Q9Y653 693 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 ZMYM6O95789 1325 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 POSTNQ15063 836 aa13.11□□□□□ -0.31
TM9SF2-201ENST00000376387 GPAA1O43292 621 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 CASP1P29466 404 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 GUCY1A2P33402 732 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 TNNT3P45378 269 aaPredicted RBP13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 TOB1P50616 345 aaPredicted RBP13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 BRD3Q15059 726 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 ZNF569Q5MCW4 686 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 ATL2Q8NHH9 583 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 ORAI2Q96SN7 254 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 CDC5LQ99459 802 aaKnown RBP13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 PSD3Q9NYI0 1048 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 CPDO75976 1380 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 NBPF26B4DH59 902 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 CCDC175P0C221 793 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 PHKG2P15735 406 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 STX17P56962 302 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 VSNL1P62760 191 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 NBPF15Q8N660 670 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 JMYQ8N9B5 988 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 PHRF1Q9P1Y6 1649 aaKnown RBP13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 UBN2Q6ZU65 1347 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 PLBD2Q8NHP8 589 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 XAGE2Q96GT9 111 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 GPR108Q9NPR9 543 aa13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 FAM217BQ9NTX9 383 aaPredicted RBP13.1□□□□□ -0.31
TM9SF2-201ENST00000376387 SCN11AQ9UI33 1791 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 BTBD18B2RXH4 712 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 B4E1Z4 1266 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 AKR1B15C9JRZ8 316 aaPredicted RBP13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 NOP2P46087 812 aaKnown RBP13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 MORC3Q14149 939 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 NTRK3Q16288 839 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 APTXQ7Z2E3 356 aaKnown RBP13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 L1RE1Q9UN81 338 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 ANGEL1Q9UNK9 670 aaKnown RBP13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 KCNJ14Q9UNX9 436 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 APOA5Q6Q788 366 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 TTC5Q8N0Z6 440 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 KRI1Q8N9T8 703 aaKnown RBP13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 ACRBPQ8NEB7 543 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 CDC23Q9UJX2 597 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 SH2B2O14492 632 aaPredicted RBP13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 ATP2B1P20020 1258 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 JAKMIP3Q5VZ66 844 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 KLHL10Q6JEL2 608 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 HDXQ7Z353 690 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 SLC35F6Q8N357 371 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 ENOX1Q8TC92 643 aaKnown RBP13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 ZBTB3Q9H5J0 574 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 RAB21Q9UL25 225 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 AKAP2Q9Y2D5 859 aa13.09□□□□□ -0.31
TM9SF2-201ENST00000376387 SARSP49591 514 aaKnown RBP13.08□□□□□ -0.32
TM9SF2-201ENST00000376387 CMTR1Q8N1G2 835 aaKnown RBP13.08□□□□□ -0.32
TM9SF2-201ENST00000376387 NOA1Q8NC60 698 aaKnown RBP13.08□□□□□ -0.32
TM9SF2-201ENST00000376387 SLC26A6Q9BXS9 759 aa13.08□□□□□ -0.32
TM9SF2-201ENST00000376387 CWC15Q9P013 229 aaKnown RBP13.08□□□□□ -0.32
TM9SF2-201ENST00000376387 A0A1B0GTH6 734 aa13.08□□□□□ -0.32
TM9SF2-201ENST00000376387 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
TM9SF2-201ENST00000376387 KIF4BQ2VIQ3 1234 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms