RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 CTNND2Q9UQB3 1225 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 B4DLN1 442 aa15.33■□□□□ 0.05
C9orf47-203ENST00000375851 PFKFB2O60825 505 aa15.33■□□□□ 0.05
C9orf47-203ENST00000375851 MFSD14BQ5SR56 506 aa15.33■□□□□ 0.05
C9orf47-203ENST00000375851 IGSF22Q8N9C0 903 aa15.33■□□□□ 0.05
C9orf47-203ENST00000375851 SELENOOQ9BVL4 669 aa15.33■□□□□ 0.05
C9orf47-203ENST00000375851 CDK12Q9NYV4 1490 aaPredicted RBP15.33■□□□□ 0.05
C9orf47-203ENST00000375851 NF2P35240 595 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 ADCK5Q3MIX3 580 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 KRT25Q7Z3Z0 450 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 GLT8D2Q9H1C3 349 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 ARHGEF10LQ9HCE6 1279 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 ERCC6L2Q5T890 1561 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 ADORA1P30542 326 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 GTF2IP78347 998 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 TCP10Q12799 353 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 USP28Q96RU2 1077 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 IMPG2Q9BZV3 1241 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 PKD2L1Q9P0L9 805 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 ARPP21Q9UBL0 812 aaPredicted RBP15.33■□□□□ 0.04
C9orf47-203ENST00000375851 NFE2L3Q9Y4A8 694 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 BACH1O14867 736 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 IL6STP40189 918 aaPredicted RBP15.33■□□□□ 0.04
C9orf47-203ENST00000375851 CHRNDQ07001 517 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 LARGE2Q8N3Y3 721 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 NOC4LQ9BVI4 516 aaKnown RBP15.33■□□□□ 0.04
C9orf47-203ENST00000375851 GPR108Q9NPR9 543 aa15.33■□□□□ 0.04
C9orf47-203ENST00000375851 LZTS2Q9BRK4 669 aa15.32■□□□□ 0.04
C9orf47-203ENST00000375851 LRWD1Q9UFC0 647 aa15.32■□□□□ 0.04
C9orf47-203ENST00000375851 ZNF75DP51815 510 aa15.32■□□□□ 0.04
C9orf47-203ENST00000375851 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
C9orf47-203ENST00000375851 GTF2F1P35269 517 aaKnown RBP eCLIP15.32■□□□□ 0.04
C9orf47-203ENST00000375851 NLRP12P59046 1061 aa15.32■□□□□ 0.04
C9orf47-203ENST00000375851 CRKLP46109 303 aaKnown RBP15.32■□□□□ 0.04
C9orf47-203ENST00000375851 ZYXQ15942 572 aaKnown RBP15.32■□□□□ 0.04
C9orf47-203ENST00000375851 ADALQ6DHV7 355 aa15.32■□□□□ 0.04
C9orf47-203ENST00000375851 CNNM4Q6P4Q7 775 aa15.32■□□□□ 0.04
C9orf47-203ENST00000375851 KRT222Q8N1A0 295 aa15.32■□□□□ 0.04
C9orf47-203ENST00000375851 CSGALNACT2Q8N6G5 542 aa15.32■□□□□ 0.04
C9orf47-203ENST00000375851 CHD1O14646 1710 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 UBE3CQ15386 1083 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 DCAF17Q5H9S7 520 aaPredicted RBP15.31■□□□□ 0.04
C9orf47-203ENST00000375851 CMTR1Q8N1G2 835 aaKnown RBP15.31■□□□□ 0.04
C9orf47-203ENST00000375851 FANCBQ8NB91 859 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 STAMQ92783 540 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 SYNCQ9H7C4 482 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 ARHGAP31Q2M1Z3 1444 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 CIAO1O76071 339 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 ADCY7P51828 1080 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 POSTNQ15063 836 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 LMBR1Q8WVP7 490 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 GOLGA1Q92805 767 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 GJA3Q9Y6H8 435 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 ACTN2P35609 894 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 HAUS3Q68CZ6 603 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 PRPHP41219 470 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 LMAN1P49257 510 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 USPL1Q5W0Q7 1092 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 TET3O43151 1660 aa15.31■□□□□ 0.04
C9orf47-203ENST00000375851 ALDH1B1P30837 517 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 ZMYM1Q5SVZ6 1142 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 CCDC122Q5T0U0 273 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 SNX29Q8TEQ0 813 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 CAPZA3Q96KX2 299 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 TNKSO95271 1327 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 SHROOM2Q13796 1616 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 CHMP2AO43633 222 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 DHX37Q8IY37 1157 aaKnown RBP15.3■□□□□ 0.04
C9orf47-203ENST00000375851 RGS22Q8NE09 1264 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 TTF2Q9UNY4 1162 aaKnown RBP15.3■□□□□ 0.04
C9orf47-203ENST00000375851 RGS12O14924 1447 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 APBA3O96018 575 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 CYP21A2P08686 494 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 PAK1Q13153 545 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 SMC1AQ14683 1233 aaKnown RBP15.3■□□□□ 0.04
C9orf47-203ENST00000375851 CCDC91Q7Z6B0 441 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 SYNRGQ9UMZ2 1314 aa15.3■□□□□ 0.04
C9orf47-203ENST00000375851 RAPGEF1Q13905 1077 aa15.29■□□□□ 0.04
C9orf47-203ENST00000375851 REXO1Q8N1G1 1221 aaKnown RBP15.29■□□□□ 0.04
C9orf47-203ENST00000375851 CHAMP1Q96JM3 812 aa15.29■□□□□ 0.04
C9orf47-203ENST00000375851 ZSCAN10Q96SZ4 725 aaPredicted RBP15.29■□□□□ 0.04
C9orf47-203ENST00000375851 HSF2BPO75031 334 aa15.29■□□□□ 0.04
C9orf47-203ENST00000375851 NOSTRINQ8IVI9 506 aa15.29■□□□□ 0.04
C9orf47-203ENST00000375851 PDIA3P30101 505 aaKnown RBP15.29■□□□□ 0.04
C9orf47-203ENST00000375851 UBE4AQ14139 1066 aa15.29■□□□□ 0.04
C9orf47-203ENST00000375851 USP40Q9NVE5 1235 aa15.29■□□□□ 0.04
C9orf47-203ENST00000375851 ANKARQ7Z5J8 1434 aa15.29■□□□□ 0.04
C9orf47-203ENST00000375851 CD2BP2O95400 341 aaKnown RBP15.28■□□□□ 0.04
C9orf47-203ENST00000375851 ADCY9O60503 1353 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 TSPOAP1O95153 1857 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 ADCY10Q96PN6 1610 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 FSD2A1L4K1 749 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 ZNF589Q86UQ0 364 aaPredicted RBP15.28■□□□□ 0.04
C9orf47-203ENST00000375851 FAM212AQ96EL1 285 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 PTPN12Q05209 780 aaKnown RBP15.28■□□□□ 0.04
C9orf47-203ENST00000375851 HERC4Q5GLZ8 1057 aaPredicted RBP15.28■□□□□ 0.04
C9orf47-203ENST00000375851 CETN3O15182 167 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 NR1I2O75469 434 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 TEKT1Q969V4 418 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 ANTXR1Q9H6X2 564 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms