RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 FAM110CQ1W6H9 321 aa28.51■■■□□ 2.15
C9orf47-202ENST00000375850 CCDC158Q5M9N0 1113 aa28.51■■■□□ 2.15
C9orf47-202ENST00000375850 ZKSCAN2Q63HK3 967 aa28.51■■■□□ 2.15
C9orf47-202ENST00000375850 TEX11Q8IYF3 940 aa28.51■■■□□ 2.15
C9orf47-202ENST00000375850 ZNF280CQ8ND82 737 aa28.51■■■□□ 2.15
C9orf47-202ENST00000375850 ADCY3O60266 1144 aa28.5■■■□□ 2.15
C9orf47-202ENST00000375850 CAP2P40123 477 aa28.5■■■□□ 2.15
C9orf47-202ENST00000375850 GCLCP48506 637 aaPredicted RBP28.5■■■□□ 2.15
C9orf47-202ENST00000375850 FLT3LGP49771 235 aa28.5■■■□□ 2.15
C9orf47-202ENST00000375850 CLUAP1Q96AJ1 413 aa28.5■■■□□ 2.15
C9orf47-202ENST00000375850 COA7Q96BR5 231 aa28.5■■■□□ 2.15
C9orf47-202ENST00000375850 AS3MTQ9HBK9 375 aa28.5■■■□□ 2.15
C9orf47-202ENST00000375850 PI4KBQ9UBF8 816 aa28.5■■■□□ 2.15
C9orf47-202ENST00000375850 POLA2Q14181 598 aa28.49■■■□□ 2.15
C9orf47-202ENST00000375850 TTC39AQ5SRH9 613 aa28.49■■■□□ 2.15
C9orf47-202ENST00000375850 ZNF512BQ96KM6 892 aaPredicted RBP28.49■■■□□ 2.15
C9orf47-202ENST00000375850 GABRQQ9UN88 632 aa28.49■■■□□ 2.15
C9orf47-202ENST00000375850 USP17L5A8MUK1 530 aa28.48■■■□□ 2.15
C9orf47-202ENST00000375850 SLURP2P0DP57 97 aa28.48■■■□□ 2.15
C9orf47-202ENST00000375850 SPP2Q13103 211 aa28.48■■■□□ 2.15
C9orf47-202ENST00000375850 TNNI3KQ59H18 835 aa28.48■■■□□ 2.15
C9orf47-202ENST00000375850 NAA16Q6N069 864 aaPredicted RBP28.48■■■□□ 2.15
C9orf47-202ENST00000375850 UBE2Q1Q7Z7E8 422 aa28.48■■■□□ 2.15
C9orf47-202ENST00000375850 U2AF1L4Q8WU68 220 aaKnown RBP28.48■■■□□ 2.15
C9orf47-202ENST00000375850 COLQQ9Y215 455 aaPredicted RBP28.48■■■□□ 2.15
C9orf47-202ENST00000375850 FPGT-TNNI3KV9GXZ4 949 aa28.48■■■□□ 2.15
C9orf47-202ENST00000375850 H0YGN5 161 aa28.47■■■□□ 2.15
C9orf47-202ENST00000375850 PPP4CP60510 307 aa28.47■■■□□ 2.15
C9orf47-202ENST00000375850 OS9Q13438 667 aaPredicted RBP28.47■■■□□ 2.15
C9orf47-202ENST00000375850 TMEM57Q8N5G2 664 aa28.47■■■□□ 2.15
C9orf47-202ENST00000375850 SSH3Q8TE77 659 aa28.47■■■□□ 2.15
C9orf47-202ENST00000375850 DPF3Q92784 378 aa28.47■■■□□ 2.15
C9orf47-202ENST00000375850 GINM1Q9NU53 330 aa28.47■■■□□ 2.15
C9orf47-202ENST00000375850 FAM196BA6NMK8 535 aa28.46■■■□□ 2.15
C9orf47-202ENST00000375850 SH3D19Q5HYK7 790 aa28.46■■■□□ 2.15
C9orf47-202ENST00000375850 TREML2Q5T2D2 321 aa28.46■■■□□ 2.15
C9orf47-202ENST00000375850 ANKRD13CQ8N6S4 541 aa28.46■■■□□ 2.15
C9orf47-202ENST00000375850 SGPL1O95470 568 aa28.45■■■□□ 2.14
C9orf47-202ENST00000375850 FXR1P51114 621 aaKnown RBP eCLIP28.45■■■□□ 2.14
C9orf47-202ENST00000375850 ATP8B2P98198 1209 aa28.45■■■□□ 2.14
C9orf47-202ENST00000375850 CCDC84Q86UT8 332 aaPredicted RBP28.45■■■□□ 2.14
C9orf47-202ENST00000375850 SH3RF3Q8TEJ3 882 aaPredicted RBP28.45■■■□□ 2.14
C9orf47-202ENST00000375850 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.45■■■□□ 2.14
C9orf47-202ENST00000375850 TNNQ9UQP3 1299 aa28.45■■■□□ 2.14
C9orf47-202ENST00000375850 PHIPQ8WWQ0 1821 aa28.45■■■□□ 2.14
C9orf47-202ENST00000375850 PTPRFP10586 1907 aa28.45■■■□□ 2.14
C9orf47-202ENST00000375850 INHAP05111 366 aa28.44■■■□□ 2.14
C9orf47-202ENST00000375850 ASNSP08243 561 aa28.44■■■□□ 2.14
C9orf47-202ENST00000375850 FOXP4Q8IVH2 680 aaPredicted RBP28.44■■■□□ 2.14
C9orf47-202ENST00000375850 WDR18Q9BV38 432 aa28.44■■■□□ 2.14
C9orf47-202ENST00000375850 UNC93B1Q9H1C4 597 aa28.44■■■□□ 2.14
C9orf47-202ENST00000375850 FARP2O94887 1054 aaPredicted RBP28.43■■■□□ 2.14
C9orf47-202ENST00000375850 HMGCS2P54868 508 aa28.43■■■□□ 2.14
C9orf47-202ENST00000375850 CERS3Q8IU89 383 aa28.43■■■□□ 2.14
C9orf47-202ENST00000375850 AATFQ9NY61 560 aaKnown RBP eCLIP28.43■■■□□ 2.14
C9orf47-202ENST00000375850 NR2E3Q9Y5X4 410 aa28.43■■■□□ 2.14
C9orf47-202ENST00000375850 MGAMO43451 1857 aa28.42■■■□□ 2.14
C9orf47-202ENST00000375850 SURF6O75683 361 aaKnown RBP28.42■■■□□ 2.14
C9orf47-202ENST00000375850 METTL16Q86W50 562 aaKnown RBP28.42■■■□□ 2.14
C9orf47-202ENST00000375850 FTSJ3Q8IY81 847 aaKnown RBP28.42■■■□□ 2.14
C9orf47-202ENST00000375850 DBNDD2Q9BQY9 259 aa28.42■■■□□ 2.14
C9orf47-202ENST00000375850 NOP58Q9Y2X3 529 aaKnown RBP28.42■■■□□ 2.14
C9orf47-202ENST00000375850 ELNP15502 786 aa28.41■■■□□ 2.14
C9orf47-202ENST00000375850 TMED8Q6PL24 325 aaPredicted RBP28.41■■■□□ 2.14
C9orf47-202ENST00000375850 TRIM34Q9BYJ4 488 aa28.41■■■□□ 2.14
C9orf47-202ENST00000375850 SNRKQ9NRH2 765 aa28.41■■■□□ 2.14
C9orf47-202ENST00000375850 ASCC2Q9H1I8 757 aaPredicted RBP28.4■■■□□ 2.14
C9orf47-202ENST00000375850 PAK6Q9NQU5 681 aaPredicted RBP28.4■■■□□ 2.14
C9orf47-202ENST00000375850 TMOD4Q9NZQ9 345 aa28.4■■■□□ 2.14
C9orf47-202ENST00000375850 FLT1P17948 1338 aa28.4■■■□□ 2.14
C9orf47-202ENST00000375850 C19orf81C9J6K1 198 aa28.39■■■□□ 2.14
C9orf47-202ENST00000375850 CYP2E1P05181 493 aaPredicted RBP28.39■■■□□ 2.14
C9orf47-202ENST00000375850 BACE1P56817 501 aa28.39■■■□□ 2.14
C9orf47-202ENST00000375850 CRACR2BQ8N4Y2 399 aaPredicted RBP28.39■■■□□ 2.14
C9orf47-202ENST00000375850 TGFBRAP1Q8WUH2 860 aa28.39■■■□□ 2.14
C9orf47-202ENST00000375850 LOC285556D6RIA3 1793 aa28.39■■■□□ 2.13
C9orf47-202ENST00000375850 MAST2Q6P0Q8 1798 aa28.38■■■□□ 2.13
C9orf47-202ENST00000375850 HLA-DOAP06340 250 aa28.38■■■□□ 2.13
C9orf47-202ENST00000375850 HOXA7P31268 230 aaPredicted RBP28.38■■■□□ 2.13
C9orf47-202ENST00000375850 RRP1BQ14684 758 aaKnown RBP28.38■■■□□ 2.13
C9orf47-202ENST00000375850 MORF4L1Q9UBU8 362 aa28.38■■■□□ 2.13
C9orf47-202ENST00000375850 TFRCP02786 760 aaKnown RBP28.37■■■□□ 2.13
C9orf47-202ENST00000375850 IRX3P78415 501 aaPredicted RBP28.37■■■□□ 2.13
C9orf47-202ENST00000375850 MAPKAPK5Q8IW41 473 aa28.37■■■□□ 2.13
C9orf47-202ENST00000375850 DEFB118Q96PH6 123 aa28.37■■■□□ 2.13
C9orf47-202ENST00000375850 TAOK2Q9UL54 1235 aa28.37■■■□□ 2.13
C9orf47-202ENST00000375850 HMGCRP04035 888 aa28.36■■■□□ 2.13
C9orf47-202ENST00000375850 MTMR2Q13614 643 aa28.36■■■□□ 2.13
C9orf47-202ENST00000375850 CHRDL2Q6WN34 429 aa28.36■■■□□ 2.13
C9orf47-202ENST00000375850 CRISPLD2Q9H0B8 497 aa28.36■■■□□ 2.13
C9orf47-202ENST00000375850 ZAP70P43403 619 aa28.35■■■□□ 2.13
C9orf47-202ENST00000375850 ITPRIPQ8IWB1 547 aa28.35■■■□□ 2.13
C9orf47-202ENST00000375850 GTF3C2Q8WUA4 911 aaPredicted RBP28.35■■■□□ 2.13
C9orf47-202ENST00000375850 DBNLQ9UJU6 430 aaKnown RBP28.35■■■□□ 2.13
C9orf47-202ENST00000375850 USP17L10C9JJH3 530 aa28.34■■■□□ 2.13
C9orf47-202ENST00000375850 ZBTB7BO15156 539 aaPredicted RBP28.34■■■□□ 2.13
C9orf47-202ENST00000375850 ADGRA1Q86SQ6 560 aa28.34■■■□□ 2.13
C9orf47-202ENST00000375850 ANKLE1Q8NAG6 615 aa28.34■■■□□ 2.13
C9orf47-202ENST00000375850 CEP290O15078 2479 aa28.34■■■□□ 2.13
C9orf47-202ENST00000375850 ERC1Q8IUD2 1116 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms