RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 KRT27Q7Z3Y8 459 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 FAM89AQ96GI7 184 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 MYH14Q7Z406 1995 aaKnown RBP16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 EFCAB8A8MWE9 144 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 B4E1Z4 1266 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 ZSCAN12O43309 604 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 ZNF827Q17R98 1081 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 JMYQ8N9B5 988 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 TRERF1Q96PN7 1200 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 BAG1Q99933 345 aaPredicted RBP16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 ISCA1Q9BUE6 129 aa16.2■□□□□ 0.18
CLCNKA-202ENST00000375692 TRIM37O94972 964 aa16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 GRIN1Q05586 938 aa16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 AMIGO3Q86WK7 504 aa16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 TRMT44Q8IYL2 757 aaKnown RBP16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 SH2B2O14492 632 aaPredicted RBP16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 ARHGAP6O43182 974 aa16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 RANBP6O60518 1105 aaKnown RBP16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 CASQ1P31415 396 aa16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 TEX35Q5T0J7 233 aa16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 APOA5Q6Q788 366 aa16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 DESI2Q9BSY9 194 aa16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 SRRTQ9BXP5 876 aaKnown RBP16.19■□□□□ 0.18
CLCNKA-202ENST00000375692 HNRNPH2P55795 449 aaKnown RBP16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 RGS17Q9UGC6 210 aaPredicted RBP16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 FAM237AA0A1B0GTK4 181 aa16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 TBC1D8O95759 1140 aa16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 MCAMP43121 646 aa16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 TBX2Q13207 712 aaPredicted RBP16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 TAF7LQ5H9L4 462 aa16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 SLC9C2Q5TAH2 1124 aa16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 GRAMD1CQ8IYS0 662 aa16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 TC2NQ8N9U0 490 aa16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 CCDC34Q96HJ3 373 aa16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 TMEM51Q9NW97 253 aa16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 CCNL1Q9UK58 526 aaPredicted RBP16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 AKAP2Q9Y2D5 859 aa16.18■□□□□ 0.18
CLCNKA-202ENST00000375692 CUTAO60888 179 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 CDK11BP21127 795 aaKnown RBP16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 IARSP41252 1262 aaKnown RBP16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 IRX5P78411 483 aaPredicted RBP16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 ST5P78524 1137 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 MAP3K9P80192 1104 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 MDM2Q00987 491 aaPredicted RBP16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 KARSQ15046 597 aaKnown RBP16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 NTRK3Q16288 839 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 ZNF772Q68DY9 489 aaPredicted RBP16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 NFXL1Q6ZNB6 911 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 NEK11Q8NG66 645 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 IRX2Q9BZI1 471 aaPredicted RBP16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 MAN1B1Q9UKM7 699 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 NFE2L3Q9Y4A8 694 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 ZBTB9Q96C00 473 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 SLC26A6Q9BXS9 759 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 LRRC4BQ9NT99 713 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 NUP188Q5SRE5 1749 aa16.17■□□□□ 0.18
CLCNKA-202ENST00000375692 ZBTB43O43298 467 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 CDKL5O76039 1030 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 PPP2R3AQ06190 1150 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 TRIM29Q14134 588 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 MTF1Q14872 753 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 CC2D1AQ6P1N0 951 aaPredicted RBP16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 UBN2Q6ZU65 1347 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 FCHSD1Q86WN1 690 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 MPHOSPH8Q99549 860 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 CALCOCO1Q9P1Z2 691 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 C4BP0C0L5 1744 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 WDR19Q8NEZ3 1342 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 BTBD18B2RXH4 712 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 GUCY1A2P33402 732 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 NLRP10Q86W26 655 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 MED15Q96RN5 788 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 ZSWIM4Q9H7M6 989 aa16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 SAMSN1Q9NSI8 373 aaKnown RBP16.16■□□□□ 0.18
CLCNKA-202ENST00000375692 BTAF1O14981 1849 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 GOLGA8AA7E2F4 631 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 POLR2DO15514 142 aaKnown RBP16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 FAM193AP78312 1265 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 CPLX2Q6PUV4 134 aaKnown RBP16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 KRI1Q8N9T8 703 aaKnown RBP16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 IGDCC4Q8TDY8 1250 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 DHX58Q96C10 678 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 PARD6BQ9BYG5 372 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 PIH1D3Q9NQM4 214 aaKnown RBP16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 SERTAD1Q9UHV2 236 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 KCNJ14Q9UNX9 436 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 MRFAP1Q9Y605 127 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 CAMTA2O94983 1202 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 OAS2P29728 719 aaKnown RBP16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 ADD2P35612 726 aa16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 TOB1P50616 345 aaPredicted RBP16.15■□□□□ 0.18
CLCNKA-202ENST00000375692 GYS2P54840 703 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms