RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 TIMM10P62072 90 aa13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 NOL9Q5SY16 702 aaKnown RBP13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 TSHZ3Q63HK5 1081 aa13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 PI4K2BQ8TCG2 481 aa13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 LPIN2Q92539 896 aa13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 PARK7Q99497 189 aaKnown RBP13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 PHIPQ8WWQ0 1821 aa13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 RFX7Q2KHR2 1363 aa13.22□□□□□ -0.29
HLA-DQA1-202ENST00000374949 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
HLA-DQA1-202ENST00000374949 TRIM6-TRIM34B2RNG4 842 aa13.22□□□□□ -0.29
HLA-DQA1-202ENST00000374949 ATP2B3Q16720 1220 aa13.22□□□□□ -0.29
HLA-DQA1-202ENST00000374949 ZFPM1Q8IX07 1006 aa13.22□□□□□ -0.29
HLA-DQA1-202ENST00000374949 DPF3Q92784 378 aa13.22□□□□□ -0.29
HLA-DQA1-202ENST00000374949 USP40Q9NVE5 1235 aa13.22□□□□□ -0.29
HLA-DQA1-202ENST00000374949 SZT2Q5T011 3432 aa13.22□□□□□ -0.29
HLA-DQA1-202ENST00000374949 A0A1B0GUL7 405 aa13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 EIF5BO60841 1220 aaKnown RBP13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 CDC45O75419 566 aa13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 BCRP11274 1271 aa13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 ATP5JP18859 108 aa13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 HOXD10P28358 340 aa13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 GJA8P48165 433 aa13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 FCGRTP55899 365 aa13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 GPAT2Q6NUI2 795 aa13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 RNF208Q9H0X6 261 aa13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 TLR7Q9NYK1 1049 aaKnown RBP13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 RBM27Q9P2N5 1060 aaKnown RBP13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 BIN2Q9UBW5 565 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 DBNLQ9UJU6 430 aaKnown RBP13.21□□□□□ -0.29
HLA-DQA1-202ENST00000374949 GJB1P08034 283 aa13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 SLURP2P0DP57 97 aa13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 PHKA1P46020 1223 aa13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 CASC1Q6TDU7 716 aa13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 UBE2Q1Q7Z7E8 422 aa13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 SCYL3Q8IZE3 742 aa13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 NKX2-3Q8TAU0 364 aa13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 RILPL2Q969X0 211 aa13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 DBNDD2Q9BQY9 259 aa13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 UNC93B1Q9H1C4 597 aa13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 GABRQQ9UN88 632 aa13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 RBM19Q9Y4C8 960 aaKnown RBP13.2□□□□□ -0.3
HLA-DQA1-202ENST00000374949 ALPK3Q96L96 1907 aa13.19□□□□□ -0.3
HLA-DQA1-202ENST00000374949 SALL1Q9NSC2 1324 aa13.19□□□□□ -0.3
HLA-DQA1-202ENST00000374949 FARP2O94887 1054 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQA1-202ENST00000374949 UBXN2AP68543 259 aa13.19□□□□□ -0.3
HLA-DQA1-202ENST00000374949 CCDC158Q5M9N0 1113 aa13.19□□□□□ -0.3
HLA-DQA1-202ENST00000374949 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
HLA-DQA1-202ENST00000374949 GADL1Q6ZQY3 521 aa13.19□□□□□ -0.3
HLA-DQA1-202ENST00000374949 SH3BP5LQ7L8J4 393 aa13.19□□□□□ -0.3
HLA-DQA1-202ENST00000374949 SLAIN1Q8ND83 568 aa13.19□□□□□ -0.3
HLA-DQA1-202ENST00000374949 U2AF1L4Q8WU68 220 aaKnown RBP13.19□□□□□ -0.3
HLA-DQA1-202ENST00000374949 ZHX2Q9Y6X8 837 aa13.19□□□□□ -0.3
HLA-DQA1-202ENST00000374949 ATAD5Q96QE3 1844 aa13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 LOC285556D6RIA3 1793 aa13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 A0A0G2JLL6 359 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 PHF20L1A8MW92 1017 aa13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 CXCL11O14625 94 aa13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 MAP4K4O95819 1239 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 ELNP15502 786 aa13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 ADORA1P30542 326 aa13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 TBC1D9Q6ZT07 1266 aa13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 PRRT2Q7Z6L0 340 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 CCDC84Q86UT8 332 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 ZSCAN29Q8IWY8 852 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 XAGE2Q96GT9 111 aa13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 HTATIP2Q9BUP3 242 aa13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 PICK1Q9NRD5 415 aa13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 GNL3LQ9NVN8 582 aaKnown RBP13.18□□□□□ -0.3
HLA-DQA1-202ENST00000374949 GAKO14976 1311 aa13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 DOCK3Q8IZD9 2030 aa13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 ADCY3O60266 1144 aa13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 SEC24BO95487 1268 aa13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 INHAP05111 366 aa13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 PTPRAP18433 802 aa13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 PICALMQ13492 652 aa13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 DZIP1Q86YF9 867 aaKnown RBP13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 EVI5LQ96CN4 794 aa13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 IDI2Q9BXS1 227 aa13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 UPF2Q9HAU5 1272 aaKnown RBP13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 DDX4Q9NQI0 724 aaKnown RBP13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 DENND2AQ9ULE3 1009 aa13.17□□□□□ -0.3
HLA-DQA1-202ENST00000374949 DDTLA6NHG4 134 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 TRIM75PA6NK02 468 aa13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 TNPO2O14787 897 aaKnown RBP13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 SEMA3EO15041 775 aa13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 ENTPD3O75355 529 aa13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 FLT3LGP49771 235 aa13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 RASGRF1Q13972 1273 aa13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 TTC39AQ5SRH9 613 aa13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 CCDC102BQ68D86 513 aa13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 FASTKD5Q7L8L6 764 aaKnown RBP13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 SMCR8Q8TEV9 937 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 HAUS7Q99871 368 aa13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 PRO3102Q9H379 93 aa13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 ABCF2Q9UG63 623 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms