RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 NAPBQ9H115 298 aa20.86■□□□□ 0.93
PFDN6-201ENST00000374606 EPB41L4AQ9HCS5 686 aaPredicted RBP20.86■□□□□ 0.93
PFDN6-201ENST00000374606 CTNNA3Q9UI47 895 aa20.86■□□□□ 0.93
PFDN6-201ENST00000374606 DDX60LQ5H9U9 1706 aaKnown RBP20.86■□□□□ 0.93
PFDN6-201ENST00000374606 RHBDL3P58872 404 aa20.85■□□□□ 0.93
PFDN6-201ENST00000374606 TTLL12Q14166 644 aaPredicted RBP20.85■□□□□ 0.93
PFDN6-201ENST00000374606 NOM1Q5C9Z4 860 aaKnown RBP20.85■□□□□ 0.93
PFDN6-201ENST00000374606 RNF20Q5VTR2 975 aa20.85■□□□□ 0.93
PFDN6-201ENST00000374606 IFNL3Q8IZI9 196 aa20.85■□□□□ 0.93
PFDN6-201ENST00000374606 USP40Q9NVE5 1235 aa20.85■□□□□ 0.93
PFDN6-201ENST00000374606 BAZ2AQ9UIF9 1905 aaKnown RBP20.84■□□□□ 0.93
PFDN6-201ENST00000374606 SPDYE2BA6NHP3 402 aa20.84■□□□□ 0.93
PFDN6-201ENST00000374606 GPR25O00155 361 aa20.84■□□□□ 0.93
PFDN6-201ENST00000374606 SPDYE6P0CI01 402 aa20.84■□□□□ 0.93
PFDN6-201ENST00000374606 ALX1Q15699 326 aa20.84■□□□□ 0.93
PFDN6-201ENST00000374606 CDC42EP5Q6NZY7 148 aa20.84■□□□□ 0.93
PFDN6-201ENST00000374606 GIMAP6Q6P9H5 292 aa20.84■□□□□ 0.93
PFDN6-201ENST00000374606 FBXO46Q6PJ61 603 aaPredicted RBP20.84■□□□□ 0.93
PFDN6-201ENST00000374606 TSHZ2Q9NRE2 1034 aa20.84■□□□□ 0.93
PFDN6-201ENST00000374606 ATP8A2Q9NTI2 1148 aa20.84■□□□□ 0.93
PFDN6-201ENST00000374606 PCDHAC2Q9Y5I4 1007 aa20.84■□□□□ 0.93
PFDN6-201ENST00000374606 FGAP02671 866 aa20.83■□□□□ 0.93
PFDN6-201ENST00000374606 NF2P35240 595 aa20.83■□□□□ 0.93
PFDN6-201ENST00000374606 TM4SF4P48230 202 aa20.83■□□□□ 0.93
PFDN6-201ENST00000374606 NECTIN1Q15223 517 aa20.83■□□□□ 0.93
PFDN6-201ENST00000374606 IMMTQ16891 758 aaKnown RBP20.83■□□□□ 0.93
PFDN6-201ENST00000374606 CREB3L3Q68CJ9 461 aa20.83■□□□□ 0.93
PFDN6-201ENST00000374606 MTMR14Q8NCE2 650 aa20.83■□□□□ 0.93
PFDN6-201ENST00000374606 TGFBRAP1Q8WUH2 860 aa20.83■□□□□ 0.93
PFDN6-201ENST00000374606 DCP1AQ9NPI6 582 aaPredicted RBP20.83■□□□□ 0.93
PFDN6-201ENST00000374606 SCAF8Q9UPN6 1271 aaKnown RBP20.83■□□□□ 0.93
PFDN6-201ENST00000374606 SLC27A2O14975 620 aa20.82■□□□□ 0.92
PFDN6-201ENST00000374606 ZKSCAN1P17029 563 aaPredicted RBP20.82■□□□□ 0.92
PFDN6-201ENST00000374606 SREBF2Q12772 1141 aa20.82■□□□□ 0.92
PFDN6-201ENST00000374606 PRAMEF18Q5VWM3 479 aa20.82■□□□□ 0.92
PFDN6-201ENST00000374606 TMOD2Q9NZR1 351 aa20.82■□□□□ 0.92
PFDN6-201ENST00000374606 PALD1Q9ULE6 856 aa20.82■□□□□ 0.92
PFDN6-201ENST00000374606 MYO1BO43795 1136 aa20.81■□□□□ 0.92
PFDN6-201ENST00000374606 ANAPC15P60006 121 aa20.81■□□□□ 0.92
PFDN6-201ENST00000374606 NBPF9Q3BBW0 867 aa20.81■□□□□ 0.92
PFDN6-201ENST00000374606 MAPKAPK5Q8IW41 473 aa20.81■□□□□ 0.92
PFDN6-201ENST00000374606 PRMT6Q96LA8 375 aaPredicted RBP20.81■□□□□ 0.92
PFDN6-201ENST00000374606 TDRD3Q9H7E2 651 aaKnown RBP20.81■□□□□ 0.92
PFDN6-201ENST00000374606 ARPP21Q9UBL0 812 aaPredicted RBP20.81■□□□□ 0.92
PFDN6-201ENST00000374606 FLT1P17948 1338 aa20.8■□□□□ 0.92
PFDN6-201ENST00000374606 MYH1P12882 1939 aa20.8■□□□□ 0.92
PFDN6-201ENST00000374606 WDHD1O75717 1129 aaPredicted RBP20.8■□□□□ 0.92
PFDN6-201ENST00000374606 MKRN3Q13064 507 aaKnown RBP20.8■□□□□ 0.92
PFDN6-201ENST00000374606 AMOTL1Q8IY63 956 aa20.8■□□□□ 0.92
PFDN6-201ENST00000374606 ZBED3Q96IU2 234 aaPredicted RBP20.8■□□□□ 0.92
PFDN6-201ENST00000374606 ZNF213O14771 459 aa20.79■□□□□ 0.92
PFDN6-201ENST00000374606 FKTNO75072 461 aa20.79■□□□□ 0.92
PFDN6-201ENST00000374606 CYP21A2P08686 494 aa20.79■□□□□ 0.92
PFDN6-201ENST00000374606 HAND2P61296 217 aa20.79■□□□□ 0.92
PFDN6-201ENST00000374606 PICALMQ13492 652 aa20.79■□□□□ 0.92
PFDN6-201ENST00000374606 KCNB2Q92953 911 aa20.79■□□□□ 0.92
PFDN6-201ENST00000374606 CFHR5Q9BXR6 569 aa20.79■□□□□ 0.92
PFDN6-201ENST00000374606 MCM9Q9NXL9 1143 aa20.79■□□□□ 0.92
PFDN6-201ENST00000374606 SNX14Q9Y5W7 946 aa20.79■□□□□ 0.92
PFDN6-201ENST00000374606 WNT10BO00744 389 aa20.78■□□□□ 0.92
PFDN6-201ENST00000374606 SPDYE2Q495Y8 402 aa20.78■□□□□ 0.92
PFDN6-201ENST00000374606 ARMC9Q7Z3E5 817 aa20.78■□□□□ 0.92
PFDN6-201ENST00000374606 RASEFQ8IZ41 740 aa20.78■□□□□ 0.92
PFDN6-201ENST00000374606 ZNF70Q9UC06 446 aaPredicted RBP20.78■□□□□ 0.92
PFDN6-201ENST00000374606 CLRN2A0PK11 232 aa20.77■□□□□ 0.92
PFDN6-201ENST00000374606 USP17L12C9JPN9 530 aa20.77■□□□□ 0.92
PFDN6-201ENST00000374606 USP17L21D6R901 530 aa20.77■□□□□ 0.92
PFDN6-201ENST00000374606 CACNB3P54284 484 aa20.77■□□□□ 0.92
PFDN6-201ENST00000374606 NFIAQ12857 509 aa20.77■□□□□ 0.92
PFDN6-201ENST00000374606 KRT32Q14532 448 aa20.77■□□□□ 0.92
PFDN6-201ENST00000374606 CTR9Q6PD62 1173 aa20.77■□□□□ 0.92
PFDN6-201ENST00000374606 IDI2Q9BXS1 227 aa20.77■□□□□ 0.92
PFDN6-201ENST00000374606 OSBPL5Q9H0X9 879 aaPredicted RBP20.77■□□□□ 0.92
PFDN6-201ENST00000374606 DDX4Q9NQI0 724 aaKnown RBP20.77■□□□□ 0.92
PFDN6-201ENST00000374606 SAP30BPQ9UHR5 308 aaKnown RBP20.77■□□□□ 0.92
PFDN6-201ENST00000374606 MINDY4BA8MYZ0 360 aa20.76■□□□□ 0.91
PFDN6-201ENST00000374606 PPARAQ07869 468 aa20.76■□□□□ 0.91
PFDN6-201ENST00000374606 SBK1Q52WX2 424 aa20.76■□□□□ 0.91
PFDN6-201ENST00000374606 VEZTQ9HBM0 779 aa20.76■□□□□ 0.91
PFDN6-201ENST00000374606 COL2A1P02458 1487 aaPredicted RBP20.75■□□□□ 0.91
PFDN6-201ENST00000374606 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
PFDN6-201ENST00000374606 ALDH1A1P00352 501 aa20.75■□□□□ 0.91
PFDN6-201ENST00000374606 POLR3DP05423 398 aaPredicted RBP20.75■□□□□ 0.91
PFDN6-201ENST00000374606 TSGA10IPQ3SY00 556 aa20.75■□□□□ 0.91
PFDN6-201ENST00000374606 APOBEC3FQ8IUX4 373 aaKnown RBP20.75■□□□□ 0.91
PFDN6-201ENST00000374606 IL17RAQ96F46 866 aa20.75■□□□□ 0.91
PFDN6-201ENST00000374606 FAM198AQ9UFP1 575 aa20.75■□□□□ 0.91
PFDN6-201ENST00000374606 ANAPC4Q9UJX5 808 aa20.75■□□□□ 0.91
PFDN6-201ENST00000374606 TAF6LQ9Y6J9 622 aa20.75■□□□□ 0.91
PFDN6-201ENST00000374606 CYP2D7A0A087X1C5 515 aa20.74■□□□□ 0.91
PFDN6-201ENST00000374606 ENTPD3O75355 529 aa20.74■□□□□ 0.91
PFDN6-201ENST00000374606 SLC3A2P08195 630 aaKnown RBP20.74■□□□□ 0.91
PFDN6-201ENST00000374606 CYP2D6P10635 497 aa20.74■□□□□ 0.91
PFDN6-201ENST00000374606 CTDSPL2Q05D32 466 aa20.74■□□□□ 0.91
PFDN6-201ENST00000374606 FKBP1CQ5VVH2 108 aa20.74■□□□□ 0.91
PFDN6-201ENST00000374606 TBC1D10CQ8IV04 446 aa20.74■□□□□ 0.91
PFDN6-201ENST00000374606 JAKMIP1Q96N16 626 aaKnown RBP20.74■□□□□ 0.91
PFDN6-201ENST00000374606 KIF2CQ99661 725 aa20.74■□□□□ 0.91
PFDN6-201ENST00000374606 R3HDMLQ9H3Y0 253 aa20.74■□□□□ 0.91
PFDN6-201ENST00000374606 ROBO3Q96MS0 1386 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms