RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SSRP1Q08945 709 aaKnown RBP11.43□□□□□ -0.58
CD28-202ENST00000374481 OTUD7BQ6GQQ9 843 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 DDX46Q7L014 1031 aaKnown RBP11.43□□□□□ -0.58
CD28-202ENST00000374481 KRI1Q8N9T8 703 aaKnown RBP11.43□□□□□ -0.58
CD28-202ENST00000374481 TTC36A6NLP5 189 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 PFKFB1P16118 471 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 METAP2P50579 478 aaKnown RBP eCLIP11.43□□□□□ -0.58
CD28-202ENST00000374481 SESN3P58005 492 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 HAND2P61296 217 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 KRT24Q2M2I5 525 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 DDX21Q9NR30 783 aaKnown RBP eCLIP11.43□□□□□ -0.58
CD28-202ENST00000374481 CWC25Q9NXE8 425 aaPredicted RBP11.43□□□□□ -0.58
CD28-202ENST00000374481 LARSQ9P2J5 1176 aaKnown RBP11.43□□□□□ -0.58
CD28-202ENST00000374481 LRRIQ1Q96JM4 1722 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 SOWAHDA6NJG2 315 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 RASSF10A6NK89 507 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 PPFIA2O75334 1257 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 FGFR1OPO95684 399 aaKnown RBP11.43□□□□□ -0.58
CD28-202ENST00000374481 MTMR3Q13615 1198 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 SUGCTQ9HAC7 445 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 SYNRGQ9UMZ2 1314 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 ZNF608Q9ULD9 1512 aaPredicted RBP11.43□□□□□ -0.58
CD28-202ENST00000374481 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 PRPHP41219 470 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 SEMA3FQ13275 785 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 FAM133BQ5BKY9 247 aaKnown RBP11.43□□□□□ -0.58
CD28-202ENST00000374481 KLHL7Q8IXQ5 586 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 RIN2Q8WYP3 895 aaPredicted RBP11.43□□□□□ -0.58
CD28-202ENST00000374481 SLC52A1Q9NWF4 448 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 TBC1D2BQ9UPU7 963 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 MAGI1Q96QZ7 1491 aaPredicted RBP11.42□□□□□ -0.58
CD28-202ENST00000374481 ZRANB2O95218 330 aaKnown RBP eCLIP11.42□□□□□ -0.58
CD28-202ENST00000374481 LARGE1O95461 756 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 TOGARAM2Q6ZUX3 1019 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 MMRN2Q9H8L6 949 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 VIPAS39Q9H9C1 493 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 NCOA5Q9HCD5 579 aaKnown RBP11.42□□□□□ -0.58
CD28-202ENST00000374481 CHST3Q7LGC8 479 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 HNRNPLLQ8WVV9 542 aaKnown RBP11.42□□□□□ -0.58
CD28-202ENST00000374481 OSBPL3Q9H4L5 887 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 EMILIN1Q9Y6C2 1016 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 EPN1Q9Y6I3 576 aaPredicted RBP11.42□□□□□ -0.58
CD28-202ENST00000374481 SYNJ2O15056 1496 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 NUP160Q12769 1436 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 PSMA7O14818 248 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 SASH3O75995 380 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 DRP2Q13474 957 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 IQCB1Q15051 598 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
CD28-202ENST00000374481 SLC40A1Q9NP59 571 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.42□□□□□ -0.58
CD28-202ENST00000374481 SERPINA10Q9UK55 444 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 SBNO1A3KN83 1393 aa11.42□□□□□ -0.58
CD28-202ENST00000374481 ZNF213O14771 459 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 NBPF10Q6P3W6 841 aaKnown RBP11.41□□□□□ -0.58
CD28-202ENST00000374481 ZMAT2Q96NC0 199 aaKnown RBP11.41□□□□□ -0.58
CD28-202ENST00000374481 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.41□□□□□ -0.58
CD28-202ENST00000374481 NKIRAS1Q9NYS0 192 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 RCOR1Q9UKL0 485 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 LAMB3Q13751 1172 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 NLRP14Q86W24 1093 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 OR8K1Q8NGG5 319 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 CCDC26Q8TAB7 109 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 HVCN1Q96D96 273 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 IL17RAQ96F46 866 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 PRAM1Q96QH2 718 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 PYM1Q9BRP8 204 aaKnown RBP11.41□□□□□ -0.58
CD28-202ENST00000374481 HAUS2Q9NVX0 235 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 PFKFB2O60825 505 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 AP1G2O75843 785 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 COG7P83436 770 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 ADCK5Q3MIX3 580 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
CD28-202ENST00000374481 ACRBPQ8NEB7 543 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 MCUR1Q96AQ8 359 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 HOOK2Q96ED9 719 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 TAB2Q9NYJ8 693 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 RASAL2Q9UJF2 1139 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 SLC12A7Q9Y666 1083 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 A0A1W2PQ27 194 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 A0A1W2PQ64 194 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 A0A1W2PQD8 194 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 TCP1P17987 556 aaKnown RBP11.41□□□□□ -0.58
CD28-202ENST00000374481 RASSF2P50749 326 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 NLRP5P59047 1200 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 GUCY2DQ02846 1103 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 PDE1CQ14123 709 aaPredicted RBP11.41□□□□□ -0.58
CD28-202ENST00000374481 BEND6Q5SZJ8 279 aaPredicted RBP11.41□□□□□ -0.58
CD28-202ENST00000374481 SMC6Q96SB8 1091 aa11.41□□□□□ -0.58
CD28-202ENST00000374481 MTRF1LQ9UGC7 380 aaKnown RBP11.41□□□□□ -0.58
CD28-202ENST00000374481 ADGRL2O95490 1459 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 UBAP1LF5GYI3 381 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 POLR2DO15514 142 aaKnown RBP11.4□□□□□ -0.58
CD28-202ENST00000374481 CTNND1O60716 968 aaKnown RBP11.4□□□□□ -0.58
CD28-202ENST00000374481 PDHA1P08559 390 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 CASP14P31944 242 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 POSTNQ15063 836 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 EMBQ6PCB8 327 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 GSPT2Q8IYD1 628 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms