RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 TPM1P09493 284 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 USP5P45974 858 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 PLA2G12BQ9BX93 195 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 SLC3A2P08195 630 aaKnown RBP12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 PDE6BP35913 854 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 ATG9AQ7Z3C6 839 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 SRRTQ9BXP5 876 aaKnown RBP12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 ADAM21Q9UKJ8 722 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 CARMIL3Q8ND23 1372 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 CSF1RP07333 972 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 GNG11P61952 73 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 MCM6Q14566 821 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 SPTY2D1Q68D10 685 aaPredicted RBP12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 KCNB2Q92953 911 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 SEC62Q99442 399 aaKnown RBP12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 DENND2AQ9ULE3 1009 aa12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 USP42Q9H9J4 1324 aaKnown RBP12.79□□□□□ -0.36
RPRD1B-201ENST00000373433 SERPINC1P01008 464 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 CCT2P78371 535 aaKnown RBP12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 ZNF396Q96N95 335 aaPredicted RBP12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 VPS18Q9P253 973 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 PHLPP2Q6ZVD8 1323 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 CFAP100Q494V2 611 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 DEFB132Q7Z7B7 95 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 SRLQ86TD4 932 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 ZNF589Q86UQ0 364 aaPredicted RBP12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 GOLGA5Q8TBA6 731 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 KCND1Q9NSA2 647 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 COL16A1Q07092 1604 aaPredicted RBP12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 ALDH1B1P30837 517 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 DPP8Q6V1X1 898 aaPredicted RBP12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 FBXO18Q8NFZ0 1043 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 MRPS27Q92552 414 aaKnown RBP12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 NEK1Q96PY6 1258 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 LRRC4BQ9NT99 713 aa12.78□□□□□ -0.36
RPRD1B-201ENST00000373433 CASP7P55210 303 aa12.77□□□□□ -0.36
RPRD1B-201ENST00000373433 TRIM29Q14134 588 aa12.77□□□□□ -0.36
RPRD1B-201ENST00000373433 UBE4AQ14139 1066 aa12.77□□□□□ -0.36
RPRD1B-201ENST00000373433 RCOR1Q9UKL0 485 aa12.77□□□□□ -0.36
RPRD1B-201ENST00000373433 MRC1P22897 1456 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 PPP2R3AQ06190 1150 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 EZH2Q15910 746 aaKnown RBP12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 SKIDA1Q1XH10 827 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 NOM1Q5C9Z4 860 aaKnown RBP12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 PDILTQ8N807 584 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 APPBP2Q92624 585 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 BSDC1Q9NW68 430 aaPredicted RBP12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 HMG20BQ9P0W2 317 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 SLC4A4Q9Y6R1 1079 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 TUBB4AP04350 444 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 LDHCP07864 332 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 ATP1A3P13637 1013 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 C2CD5Q86YS7 1000 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 RIPOR2Q9Y4F9 1068 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 ZNF804BA4D1E1 1349 aa12.77□□□□□ -0.37
RPRD1B-201ENST00000373433 ANKRD65E5RJM6 399 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 ECM2O94769 699 aaPredicted RBP12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 FANCCQ00597 558 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 HSP90AA4PQ58FG1 418 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 PARD6BQ9BYG5 372 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 HELLSQ9NRZ9 838 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 USP54Q70EL1 1684 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 SCRN1Q12765 414 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 STK38Q15208 465 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 MARF1Q9Y4F3 1742 aaKnown RBP12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 ATP8B1O43520 1251 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 MBD4O95243 580 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 BAG3O95817 575 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 LDHBP07195 334 aaKnown RBP12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 NDUFA8P51970 172 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 UBASH3AP57075 661 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 REXO1L1PQ8IX06 675 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 GPR161Q8N6U8 529 aaKnown RBP12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 KIAA1468Q9P260 1216 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 MINPP1Q9UNW1 487 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 COL18A1P39060 1754 aa12.76□□□□□ -0.37
RPRD1B-201ENST00000373433 PTPDC1A2A3K4 754 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 GPAA1O43292 621 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 ACTN2P35609 894 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 NOP2P46087 812 aaKnown RBP12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 TRIM65Q6PJ69 517 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 ENGASEQ8NFI3 743 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 UBAC1Q9BSL1 405 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 NCOA5Q9HCD5 579 aaKnown RBP12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 ZNF532Q9HCE3 1301 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 LRP6O75581 1613 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 FANCGO15287 622 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 ZSCAN12O43309 604 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 POLR3DP05423 398 aaPredicted RBP12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 GRAPQ13588 217 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 PRR5LQ6MZQ0 368 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 POTEAQ6S8J7 498 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 GRAPLQ8TC17 118 aaPredicted RBP12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 EXOC4Q96A65 974 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 PCDHA7Q9UN72 937 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 MAGEB6P1A0A0J9YX57 407 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 H3BQF6 201 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 ADD1P35611 737 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms