RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 LONRF3Q496Y0 759 aa27.52■■■□□ 2
CDK9-201ENST00000373264 ZNF654Q8IZM8 581 aa27.52■■■□□ 2
CDK9-201ENST00000373264 LAMB2P55268 1798 aa27.52■■■□□ 2
CDK9-201ENST00000373264 MMP1P03956 469 aa27.51■■■□□ 2
CDK9-201ENST00000373264 NCAPHQ15003 741 aa27.51■■■□□ 2
CDK9-201ENST00000373264 AMIGO3Q86WK7 504 aa27.51■■■□□ 2
CDK9-201ENST00000373264 NOSTRINQ8IVI9 506 aa27.51■■■□□ 2
CDK9-201ENST00000373264 GTF2E1P29083 439 aaPredicted RBP27.51■■□□□ 1.99
CDK9-201ENST00000373264 NLRP12P59046 1061 aa27.51■■□□□ 1.99
CDK9-201ENST00000373264 XPO4Q9C0E2 1151 aaKnown RBP27.51■■□□□ 1.99
CDK9-201ENST00000373264 BCL11BQ9C0K0 894 aaPredicted RBP27.51■■□□□ 1.99
CDK9-201ENST00000373264 TFCP2L1Q9NZI6 479 aa27.51■■□□□ 1.99
CDK9-201ENST00000373264 MYH2Q9UKX2 1941 aa27.51■■□□□ 1.99
CDK9-201ENST00000373264 TNKSO95271 1327 aa27.51■■□□□ 1.99
CDK9-201ENST00000373264 PPP6R2O75170 966 aa27.5■■□□□ 1.99
CDK9-201ENST00000373264 FOXP4Q8IVH2 680 aaPredicted RBP27.5■■□□□ 1.99
CDK9-201ENST00000373264 CRACR2BQ8N4Y2 399 aaPredicted RBP27.5■■□□□ 1.99
CDK9-201ENST00000373264 FANCBQ8NB91 859 aa27.5■■□□□ 1.99
CDK9-201ENST00000373264 PDCL3Q9H2J4 239 aa27.5■■□□□ 1.99
CDK9-201ENST00000373264 IFNKQ9P0W0 207 aa27.5■■□□□ 1.99
CDK9-201ENST00000373264 FAM205CA6NFA0 338 aa27.5■■□□□ 1.99
CDK9-201ENST00000373264 ATP1A3P13637 1013 aa27.5■■□□□ 1.99
CDK9-201ENST00000373264 PTPN21Q16825 1174 aa27.5■■□□□ 1.99
CDK9-201ENST00000373264 RESP18Q5W5W9 173 aa27.5■■□□□ 1.99
CDK9-201ENST00000373264 STK36Q9NRP7 1315 aa27.5■■□□□ 1.99
CDK9-201ENST00000373264 CACNA1SQ13698 1873 aa27.5■■□□□ 1.99
CDK9-201ENST00000373264 CASZ1Q86V15 1759 aa27.49■■□□□ 1.99
CDK9-201ENST00000373264 LMOD1P29536 600 aaPredicted RBP27.49■■□□□ 1.99
CDK9-201ENST00000373264 SART3Q15020 963 aaKnown RBP27.49■■□□□ 1.99
CDK9-201ENST00000373264 METTL16Q86W50 562 aaKnown RBP27.49■■□□□ 1.99
CDK9-201ENST00000373264 UBAC1Q9BSL1 405 aa27.49■■□□□ 1.99
CDK9-201ENST00000373264 BSDC1Q9NW68 430 aaPredicted RBP27.49■■□□□ 1.99
CDK9-201ENST00000373264 ERICH2A1L162 156 aa27.49■■□□□ 1.99
CDK9-201ENST00000373264 SMC2O95347 1197 aa27.49■■□□□ 1.99
CDK9-201ENST00000373264 HSD3B7Q9H2F3 369 aa27.49■■□□□ 1.99
CDK9-201ENST00000373264 PCDHB6Q9Y5E3 794 aa27.49■■□□□ 1.99
CDK9-201ENST00000373264 COL5A3P25940 1745 aaPredicted RBP27.49■■□□□ 1.99
CDK9-201ENST00000373264 SKILP12757 684 aa27.48■■□□□ 1.99
CDK9-201ENST00000373264 SF3B3Q15393 1217 aaKnown RBP27.48■■□□□ 1.99
CDK9-201ENST00000373264 SEC23AQ15436 765 aa27.48■■□□□ 1.99
CDK9-201ENST00000373264 SLC4A8Q2Y0W8 1093 aa27.48■■□□□ 1.99
CDK9-201ENST00000373264 BARGINQ6ZT62 677 aa27.48■■□□□ 1.99
CDK9-201ENST00000373264 CCZ1BP86790 482 aa27.48■■□□□ 1.99
CDK9-201ENST00000373264 CCZ1P86791 482 aaPredicted RBP27.48■■□□□ 1.99
CDK9-201ENST00000373264 ENAHQ8N8S7 591 aaPredicted RBP27.47■■□□□ 1.99
CDK9-201ENST00000373264 SMARCC1Q92922 1105 aaPredicted RBP27.47■■□□□ 1.99
CDK9-201ENST00000373264 A0A1B0GUL6 1792 aa27.47■■□□□ 1.99
CDK9-201ENST00000373264 CLEC4GQ6UXB4 293 aa27.47■■□□□ 1.99
CDK9-201ENST00000373264 TRIM22Q8IYM9 498 aa27.47■■□□□ 1.99
CDK9-201ENST00000373264 GTF2F1P35269 517 aaKnown RBP eCLIP27.46■■□□□ 1.995e-6■■□□□ 13.8
CDK9-201ENST00000373264 RBM6P78332 1123 aaKnown RBP27.46■■□□□ 1.99
CDK9-201ENST00000373264 UBE4AQ14139 1066 aa27.46■■□□□ 1.99
CDK9-201ENST00000373264 TPD52L1Q16890 204 aaPredicted RBP27.46■■□□□ 1.99
CDK9-201ENST00000373264 TRMT1Q9NXH9 659 aaKnown RBP27.46■■□□□ 1.99
CDK9-201ENST00000373264 KCNH3Q9ULD8 1083 aa27.46■■□□□ 1.99
CDK9-201ENST00000373264 BAZ2BQ9UIF8 2168 aaKnown RBP27.46■■□□□ 1.99
CDK9-201ENST00000373264 NMT2O60551 498 aa27.46■■□□□ 1.99
CDK9-201ENST00000373264 TNNT1P13805 278 aa27.46■■□□□ 1.99
CDK9-201ENST00000373264 CAVIN4Q5BKX8 364 aa27.45■■□□□ 1.99
CDK9-201ENST00000373264 EARS2Q5JPH6 523 aaKnown RBP27.45■■□□□ 1.99
CDK9-201ENST00000373264 USP49Q70CQ1 688 aa27.45■■□□□ 1.99
CDK9-201ENST00000373264 TXNRD3Q86VQ6 643 aa27.45■■□□□ 1.99
CDK9-201ENST00000373264 JMYQ8N9B5 988 aa27.45■■□□□ 1.99
CDK9-201ENST00000373264 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.45■■□□□ 1.99
CDK9-201ENST00000373264 GNL3LQ9NVN8 582 aaKnown RBP27.45■■□□□ 1.99
CDK9-201ENST00000373264 VPS54Q9P1Q0 977 aa27.45■■□□□ 1.99
CDK9-201ENST00000373264 TUBE1Q9UJT0 475 aa27.45■■□□□ 1.99
CDK9-201ENST00000373264 PLEKHA8P1O95397 391 aa27.45■■□□□ 1.98
CDK9-201ENST00000373264 GRAMD1CQ8IYS0 662 aa27.45■■□□□ 1.98
CDK9-201ENST00000373264 RNF41Q9H4P4 317 aaPredicted RBP27.45■■□□□ 1.98
CDK9-201ENST00000373264 NID2Q14112 1375 aa27.44■■□□□ 1.98
CDK9-201ENST00000373264 BMP6P22004 513 aa27.44■■□□□ 1.98
CDK9-201ENST00000373264 HSP90AA4PQ58FG1 418 aa27.44■■□□□ 1.98
CDK9-201ENST00000373264 NOM1Q5C9Z4 860 aaKnown RBP27.44■■□□□ 1.98
CDK9-201ENST00000373264 TMC6Q7Z403 805 aa27.44■■□□□ 1.98
CDK9-201ENST00000373264 BPIFA3Q9BQP9 254 aa27.44■■□□□ 1.98
CDK9-201ENST00000373264 CUTAO60888 179 aa27.44■■□□□ 1.98
CDK9-201ENST00000373264 CHAF1AQ13111 956 aaPredicted RBP27.44■■□□□ 1.98
CDK9-201ENST00000373264 ESR2Q92731 530 aa27.44■■□□□ 1.98
CDK9-201ENST00000373264 DPF2Q92785 391 aa27.44■■□□□ 1.98
CDK9-201ENST00000373264 CABP5Q9NP86 173 aa27.44■■□□□ 1.98
CDK9-201ENST00000373264 USP17L12C9JPN9 530 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 USP17L21D6R901 530 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 DEXIO95424 95 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 PRDX5P30044 214 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 PDE4BQ07343 736 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 CTR9Q6PD62 1173 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 KRBA2Q6ZNG9 492 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 KRI1Q8N9T8 703 aaKnown RBP27.43■■□□□ 1.98
CDK9-201ENST00000373264 TIGD1Q96MW7 591 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 C8orf37Q96NL8 207 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 AATFQ9NY61 560 aaKnown RBP eCLIP27.43■■□□□ 1.98
CDK9-201ENST00000373264 PCDHA5Q9Y5H7 936 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 WNT7AO00755 349 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 CYP2D6P10635 497 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 SAFBQ15424 915 aaKnown RBP eCLIP27.43■■□□□ 1.98
CDK9-201ENST00000373264 PDILTQ8N807 584 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 CNNM3Q8NE01 707 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 ZNF592Q92610 1267 aa27.43■■□□□ 1.98
CDK9-201ENST00000373264 ZSCAN10Q96SZ4 725 aaPredicted RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms