RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 ARPP21Q9UBL0 812 aaPredicted RBP27.6■■■□□ 2.01
LHX3-201ENST00000371746 MMP10P09238 476 aa27.59■■■□□ 2.01
LHX3-201ENST00000371746 IL1R1P14778 569 aa27.59■■■□□ 2.01
LHX3-201ENST00000371746 RXRBP28702 533 aa27.59■■■□□ 2.01
LHX3-201ENST00000371746 TNMDQ9H2S6 317 aa27.59■■■□□ 2.01
LHX3-201ENST00000371746 DDX19AQ9NUU7 478 aaKnown RBP27.59■■■□□ 2.01
LHX3-201ENST00000371746 RTEL1Q9NZ71 1219 aa27.59■■■□□ 2.01
LHX3-201ENST00000371746 NMT2O60551 498 aa27.59■■■□□ 2.01
LHX3-201ENST00000371746 MAP3K11Q16584 847 aa27.59■■■□□ 2.01
LHX3-201ENST00000371746 TRIM44Q96DX7 344 aaPredicted RBP27.59■■■□□ 2.01
LHX3-201ENST00000371746 CCDC88AQ3V6T2 1871 aa27.59■■■□□ 2.01
LHX3-201ENST00000371746 HMGB2P26583 209 aaKnown RBP27.58■■■□□ 2.01
LHX3-201ENST00000371746 FAM47AQ5JRC9 791 aa27.58■■■□□ 2.01
LHX3-201ENST00000371746 IQCA1Q86XH1 822 aa27.58■■■□□ 2.01
LHX3-201ENST00000371746 GOLPH3LQ9H4A5 285 aa27.58■■■□□ 2.01
LHX3-201ENST00000371746 MYH2Q9UKX2 1941 aa27.58■■■□□ 2.01
LHX3-201ENST00000371746 STK36Q9NRP7 1315 aa27.58■■■□□ 2.01
LHX3-201ENST00000371746 SRGNP10124 158 aa27.58■■■□□ 2.01
LHX3-201ENST00000371746 PCP11498 1178 aaKnown RBP27.58■■■□□ 2.01
LHX3-201ENST00000371746 USP5P45974 858 aa27.58■■■□□ 2.01
LHX3-201ENST00000371746 IFIT1BQ5T764 474 aaKnown RBP27.58■■■□□ 2.01
LHX3-201ENST00000371746 CCAR1Q8IX12 1150 aaKnown RBP27.58■■■□□ 2.01
LHX3-201ENST00000371746 GSTO1P78417 241 aa27.57■■■□□ 2
LHX3-201ENST00000371746 CLSTN2Q9H4D0 955 aa27.57■■■□□ 2
LHX3-201ENST00000371746 MKRN1Q9UHC7 482 aaKnown RBP27.57■■■□□ 2
LHX3-201ENST00000371746 SBK1Q52WX2 424 aa27.57■■■□□ 2
LHX3-201ENST00000371746 NBPF11Q86T75 865 aa27.57■■■□□ 2
LHX3-201ENST00000371746 LINC00301Q8NCQ3 95 aa27.57■■■□□ 2
LHX3-201ENST00000371746 ORC4O43929 436 aa27.56■■■□□ 2
LHX3-201ENST00000371746 TRIM29Q14134 588 aa27.56■■■□□ 2
LHX3-201ENST00000371746 MFSD14BQ5SR56 506 aa27.56■■■□□ 2
LHX3-201ENST00000371746 CCDC196A0A1B0GTZ2 297 aa27.56■■■□□ 2
LHX3-201ENST00000371746 SP8Q8IXZ3 490 aa27.56■■■□□ 2
LHX3-201ENST00000371746 TRIM22Q8IYM9 498 aa27.56■■■□□ 2
LHX3-201ENST00000371746 CRACR2BQ8N4Y2 399 aaPredicted RBP27.56■■■□□ 2
LHX3-201ENST00000371746 PCDHA7Q9UN72 937 aa27.56■■■□□ 2
LHX3-201ENST00000371746 MROH7-TTC4A0A0A0MT08 1334 aa27.55■■■□□ 2
LHX3-201ENST00000371746 RIMBP2O15034 1052 aa27.55■■■□□ 2
LHX3-201ENST00000371746 RCAN1P53805 252 aa27.55■■■□□ 2
LHX3-201ENST00000371746 GNL2Q13823 731 aaKnown RBP27.55■■■□□ 2
LHX3-201ENST00000371746 STK38Q15208 465 aa27.55■■■□□ 2
LHX3-201ENST00000371746 POLR3EQ9NVU0 708 aa27.55■■■□□ 2
LHX3-201ENST00000371746 ATP6V0A2Q9Y487 856 aa27.55■■■□□ 2
LHX3-201ENST00000371746 BAG3O95817 575 aa27.55■■■□□ 2
LHX3-201ENST00000371746 SLC3A2P08195 630 aaKnown RBP27.55■■■□□ 2
LHX3-201ENST00000371746 TGFBRAP1Q8WUH2 860 aa27.55■■■□□ 2
LHX3-201ENST00000371746 PDLIM2Q96JY6 352 aa27.55■■■□□ 2
LHX3-201ENST00000371746 RTFDC1Q9BY42 306 aaPredicted RBP27.55■■■□□ 2
LHX3-201ENST00000371746 ANKRD31Q8N7Z5 1873 aa27.54■■■□□ 2
LHX3-201ENST00000371746 CCDC192P0DO97 292 aa27.54■■■□□ 2
LHX3-201ENST00000371746 FAM43AQ8N2R8 423 aa27.54■■■□□ 2
LHX3-201ENST00000371746 RRAGDQ9NQL2 400 aaPredicted RBP27.54■■■□□ 2
LHX3-201ENST00000371746 CATIPQ7Z7H3 387 aa27.53■■■□□ 2
LHX3-201ENST00000371746 DYNLL2Q96FJ2 89 aa27.53■■■□□ 2
LHX3-201ENST00000371746 NOL10Q9BSC4 688 aaKnown RBP27.53■■■□□ 2
LHX3-201ENST00000371746 PDE4BQ07343 736 aa27.53■■■□□ 2
LHX3-201ENST00000371746 SF3A1Q15459 793 aaKnown RBP27.53■■■□□ 2
LHX3-201ENST00000371746 C12orf60Q5U649 245 aa27.53■■■□□ 2
LHX3-201ENST00000371746 RGS22Q8NE09 1264 aa27.53■■■□□ 2
LHX3-201ENST00000371746 KCNJ14Q9UNX9 436 aa27.53■■■□□ 2
LHX3-201ENST00000371746 BTDP43251 543 aa27.52■■■□□ 2
LHX3-201ENST00000371746 PPP4CP60510 307 aa27.52■■■□□ 2
LHX3-201ENST00000371746 PARP3Q9Y6F1 533 aa27.52■■■□□ 2
LHX3-201ENST00000371746 ECM29Q5VYK3 1845 aa27.52■■■□□ 2
LHX3-201ENST00000371746 LDHCP07864 332 aa27.52■■■□□ 2
LHX3-201ENST00000371746 NPR1P16066 1061 aa27.52■■■□□ 2
LHX3-201ENST00000371746 TROAPQ12815 778 aa27.52■■■□□ 2
LHX3-201ENST00000371746 ANO1Q5XXA6 986 aa27.52■■■□□ 2
LHX3-201ENST00000371746 TMC4Q7Z404 712 aa27.52■■■□□ 2
LHX3-201ENST00000371746 MAPKAPK5Q8IW41 473 aa27.52■■■□□ 2
LHX3-201ENST00000371746 FSIP1Q8NA03 581 aa27.52■■■□□ 2
LHX3-201ENST00000371746 WASF1Q92558 559 aa27.52■■■□□ 2
LHX3-201ENST00000371746 KIAA1551Q9HCM1 1747 aa27.52■■■□□ 2
LHX3-201ENST00000371746 TSPY2A6NKD2 308 aa27.51■■■□□ 2
LHX3-201ENST00000371746 SPTLC2O15270 562 aa27.51■■■□□ 2
LHX3-201ENST00000371746 YEATS4O95619 227 aa27.51■■■□□ 2
LHX3-201ENST00000371746 TYRO3Q06418 890 aa27.51■■■□□ 2
LHX3-201ENST00000371746 SNW1Q13573 536 aaKnown RBP27.51■■■□□ 2
LHX3-201ENST00000371746 CCDC73Q6ZRK6 1079 aa27.51■■■□□ 2
LHX3-201ENST00000371746 FLAD1Q8NFF5 587 aa27.51■■■□□ 2
LHX3-201ENST00000371746 KCNG4Q8TDN1 519 aa27.51■■■□□ 2
LHX3-201ENST00000371746 IGSF3O75054 1194 aa27.51■■□□□ 1.99
LHX3-201ENST00000371746 U2AF2P26368 475 aaKnown RBP eCLIP27.51■■□□□ 1.99
LHX3-201ENST00000371746 GTF2IP78347 998 aa27.51■■□□□ 1.99
LHX3-201ENST00000371746 SAP30BPQ9UHR5 308 aaKnown RBP27.51■■□□□ 1.99
LHX3-201ENST00000371746 PLEKHA8P1O95397 391 aa27.5■■□□□ 1.99
LHX3-201ENST00000371746 DEXIO95424 95 aa27.5■■□□□ 1.99
LHX3-201ENST00000371746 RBM43Q6ZSC3 357 aaKnown RBP27.5■■□□□ 1.99
LHX3-201ENST00000371746 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.5■■□□□ 1.99
LHX3-201ENST00000371746 hCG_1642624A0A1W2PR95 340 aa27.5■■□□□ 1.99
LHX3-201ENST00000371746 LRRC37AA6NMS7 1700 aa27.49■■□□□ 1.99
LHX3-201ENST00000371746 LTBP1Q14766 1721 aa27.49■■□□□ 1.99
LHX3-201ENST00000371746 LAMB1P07942 1786 aa27.49■■□□□ 1.99
LHX3-201ENST00000371746 BTBD18B2RXH4 712 aa27.49■■□□□ 1.99
LHX3-201ENST00000371746 ADALQ6DHV7 355 aa27.49■■□□□ 1.99
LHX3-201ENST00000371746 KLHL34Q8N239 644 aa27.49■■□□□ 1.99
LHX3-201ENST00000371746 ENGASEQ8NFI3 743 aa27.49■■□□□ 1.99
LHX3-201ENST00000371746 USP25Q9UHP3 1055 aa27.49■■□□□ 1.99
LHX3-201ENST00000371746 MRVI1Q9Y6F6 885 aa27.49■■□□□ 1.99
LHX3-201ENST00000371746 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms