RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
PHACTR3-204ENST00000371015 ZNF396Q96N95 335 aaPredicted RBP18.02■□□□□ 0.48
PHACTR3-204ENST00000371015 SCLT1Q96NL6 688 aa18.02■□□□□ 0.48
PHACTR3-204ENST00000371015 PCDHGC5Q9Y5F6 944 aa18.02■□□□□ 0.48
PHACTR3-204ENST00000371015 CFAP100Q494V2 611 aa18.02■□□□□ 0.48
PHACTR3-204ENST00000371015 MYSM1Q5VVJ2 828 aa18.02■□□□□ 0.48
PHACTR3-204ENST00000371015 LARP6Q9BRS8 491 aaKnown RBP18.02■□□□□ 0.48
PHACTR3-204ENST00000371015 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
PHACTR3-204ENST00000371015 CPSF1Q10570 1443 aaKnown RBP18.02■□□□□ 0.47
PHACTR3-204ENST00000371015 EDC4Q6P2E9 1401 aaKnown RBP18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 AGPSO00116 658 aa18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 BIN1O00499 593 aa18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 LUC7L3O95232 432 aaKnown RBP18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 XRCC4Q13426 336 aa18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 C8orf58Q8NAV2 365 aa18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 B4GALNT2Q8NHY0 566 aa18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 MIPOL1Q8TD10 442 aa18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 ACSBG1Q96GR2 724 aa18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 DPCR1Q3MIW9 517 aa18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 CCDC181Q5TID7 509 aa18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 MTHFD1LQ6UB35 978 aa18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 NAPGQ99747 312 aaPredicted RBP18.01■□□□□ 0.47
PHACTR3-204ENST00000371015 A0A1W2PQ27 194 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 A0A1W2PQ64 194 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 A0A1W2PQD8 194 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 ZSCAN9O15535 394 aaPredicted RBP18■□□□□ 0.47
PHACTR3-204ENST00000371015 PDHBP11177 359 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 SF3A1Q15459 793 aaKnown RBP18■□□□□ 0.47
PHACTR3-204ENST00000371015 CCDC57Q2TAC2 916 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 C6orf89Q6UWU4 347 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 RASSF8Q8NHQ8 419 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 ZNF526Q8TF50 670 aaPredicted RBP18■□□□□ 0.47
PHACTR3-204ENST00000371015 TSPAN18Q96SJ8 248 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 XRN1Q8IZH2 1706 aaKnown RBP18■□□□□ 0.47
PHACTR3-204ENST00000371015 RPSAP08865 295 aaKnown RBP18■□□□□ 0.47
PHACTR3-204ENST00000371015 ARHGAP22Q7Z5H3 698 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 PAPOLBQ9NRJ5 636 aaKnown RBP18■□□□□ 0.47
PHACTR3-204ENST00000371015 TBX22Q9Y458 520 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 EMILIN1Q9Y6C2 1016 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 FBLN1P23142 703 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 NAA35Q5VZE5 725 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 TOGARAM2Q6ZUX3 1019 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 FMR1NBQ8N0W7 255 aaPredicted RBP18■□□□□ 0.47
PHACTR3-204ENST00000371015 CNTROBQ8N137 903 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 MRPS27Q92552 414 aaKnown RBP18■□□□□ 0.47
PHACTR3-204ENST00000371015 MOV10L1Q9BXT6 1211 aaKnown RBP18■□□□□ 0.47
PHACTR3-204ENST00000371015 GOLPH3LQ9H4A5 285 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 GOPCQ9HD26 462 aa18■□□□□ 0.47
PHACTR3-204ENST00000371015 SFSWAPQ12872 951 aaKnown RBP17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 RIPK1Q13546 671 aa17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 THEMIS2Q5TEJ8 643 aa17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 NECAB1Q8N987 351 aa17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 FSIP1Q8NA03 581 aa17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 ANKRD27Q96NW4 1050 aa17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 STRCP1A6NGW2 1772 aa17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 PYGLP06737 847 aa17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 MYL5Q02045 173 aa17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 E2F5Q15329 346 aa17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 ALS2CLQ60I27 953 aa17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 UBE3BQ7Z3V4 1068 aa17.99■□□□□ 0.47
PHACTR3-204ENST00000371015 H3BQV1 296 aa17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 PPP1R12BO60237 982 aaPredicted RBP17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 LMOD1P29536 600 aaPredicted RBP17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 IFFO2Q5TF58 517 aa17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 TXNDC2Q86VQ3 553 aa17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 PANX2Q96RD6 677 aa17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 MEIS3Q99687 375 aa17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 TTF2Q9UNY4 1162 aaKnown RBP17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 C15orf41Q9Y2V0 281 aa17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 KDM6AO15550 1401 aaPredicted RBP17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 DCCP43146 1447 aa17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 ZRSR2Q15696 482 aaKnown RBP17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 NSMCE1Q8WV22 266 aa17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 CCDC97Q96F63 343 aaPredicted RBP17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 IL25Q9H293 177 aa17.98■□□□□ 0.47
PHACTR3-204ENST00000371015 XIRP1Q702N8 1843 aaKnown RBP17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 SPDYE3A6NKU9 549 aa17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 BUB1BO60566 1050 aaPredicted RBP17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 KARSQ15046 597 aaKnown RBP17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 LRRC23Q53EV4 343 aaPredicted RBP17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 GALNT15Q8N3T1 639 aa17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 CUL5Q93034 780 aa17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 ZNF232Q9UNY5 417 aa17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 DLG5Q8TDM6 1919 aa17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 LACTB2Q53H82 288 aaPredicted RBP17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 NAA16Q6N069 864 aaPredicted RBP17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 UNC5CLQ8IV45 518 aa17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 TC2NQ8N9U0 490 aa17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 ZNF473Q8WTR7 871 aaKnown RBP17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 TSC22D3Q99576 134 aa17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 TSGA10Q9BZW7 698 aa17.97■□□□□ 0.47
PHACTR3-204ENST00000371015 ABLIM1O14639 778 aa17.96■□□□□ 0.47
PHACTR3-204ENST00000371015 MAP4K4O95819 1239 aaPredicted RBP17.96■□□□□ 0.47
PHACTR3-204ENST00000371015 FAM107AO95990 144 aa17.96■□□□□ 0.47
PHACTR3-204ENST00000371015 GNAI2P04899 355 aa17.96■□□□□ 0.47
PHACTR3-204ENST00000371015 SLC3A2P08195 630 aaKnown RBP17.96■□□□□ 0.47
PHACTR3-204ENST00000371015 KCNA6P17658 529 aa17.96■□□□□ 0.47
PHACTR3-204ENST00000371015 APBA1Q02410 837 aa17.96■□□□□ 0.47
PHACTR3-204ENST00000371015 SPECC1LQ69YQ0 1117 aa17.96■□□□□ 0.47
PHACTR3-204ENST00000371015 ADALQ6DHV7 355 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms