RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 EDC3Q96F86 508 aaKnown RBP13.44□□□□□ -0.26
EXOSC1-202ENST00000370885 ERO1AQ96HE7 468 aa13.44□□□□□ -0.26
EXOSC1-202ENST00000370885 EFCC1Q9HA90 598 aa13.44□□□□□ -0.26
EXOSC1-202ENST00000370885 CPA4Q9UI42 421 aa13.44□□□□□ -0.26
EXOSC1-202ENST00000370885 ATAD5Q96QE3 1844 aa13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 FLT1P17948 1338 aa13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 A0A0G2JLL6 359 aaPredicted RBP13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 CTNND1O60716 968 aaKnown RBP13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 IDH1O75874 414 aaKnown RBP13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 MAP4K4O95819 1239 aaPredicted RBP13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 CHGBP05060 677 aa13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 CYP2C8P10632 490 aa13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 SLFNL1Q499Z3 407 aa13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 PRRT2Q7Z6L0 340 aaPredicted RBP13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 ERC1Q8IUD2 1116 aa13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 MIGA1Q8NAN2 632 aa13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 ZCCHC17Q9NP64 241 aaKnown RBP13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 PALD1Q9ULE6 856 aa13.43□□□□□ -0.26
EXOSC1-202ENST00000370885 LACTBP83111 547 aaPredicted RBP13.42□□□□□ -0.26
EXOSC1-202ENST00000370885 EVX2Q03828 476 aa13.42□□□□□ -0.26
EXOSC1-202ENST00000370885 PDE3AQ14432 1141 aa13.42□□□□□ -0.26
EXOSC1-202ENST00000370885 SLC4A8Q2Y0W8 1093 aa13.42□□□□□ -0.26
EXOSC1-202ENST00000370885 MAGEB6Q8N7X4 407 aa13.42□□□□□ -0.26
EXOSC1-202ENST00000370885 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
EXOSC1-202ENST00000370885 SAP30BPQ9UHR5 308 aaKnown RBP13.42□□□□□ -0.26
EXOSC1-202ENST00000370885 PTCH2Q9Y6C5 1203 aa13.42□□□□□ -0.26
EXOSC1-202ENST00000370885 POTEFA5A3E0 1075 aa13.41□□□□□ -0.26
EXOSC1-202ENST00000370885 TRIM75PA6NK02 468 aa13.41□□□□□ -0.26
EXOSC1-202ENST00000370885 SMARCA5O60264 1052 aaPredicted RBP13.41□□□□□ -0.26
EXOSC1-202ENST00000370885 NEFLP07196 543 aa13.41□□□□□ -0.26
EXOSC1-202ENST00000370885 CAP2P40123 477 aa13.41□□□□□ -0.26
EXOSC1-202ENST00000370885 TREML2Q5T2D2 321 aa13.41□□□□□ -0.26
EXOSC1-202ENST00000370885 METTL16Q86W50 562 aaKnown RBP13.41□□□□□ -0.26
EXOSC1-202ENST00000370885 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
EXOSC1-202ENST00000370885 PICK1Q9NRD5 415 aa13.41□□□□□ -0.26
EXOSC1-202ENST00000370885 BAG3O95817 575 aa13.4□□□□□ -0.26
EXOSC1-202ENST00000370885 BCRP11274 1271 aa13.4□□□□□ -0.26
EXOSC1-202ENST00000370885 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
EXOSC1-202ENST00000370885 GADL1Q6ZQY3 521 aa13.4□□□□□ -0.26
EXOSC1-202ENST00000370885 TRIM47Q96LD4 638 aa13.4□□□□□ -0.26
EXOSC1-202ENST00000370885 RIOK1Q9BRS2 568 aaKnown RBP13.4□□□□□ -0.26
EXOSC1-202ENST00000370885 PI4KBQ9UBF8 816 aa13.4□□□□□ -0.26
EXOSC1-202ENST00000370885 MYH1P12882 1939 aa13.4□□□□□ -0.26
EXOSC1-202ENST00000370885 KIAA0100Q14667 2235 aaKnown RBP13.39□□□□□ -0.27
EXOSC1-202ENST00000370885 TCRBV5S4A2TA0A5A2 114 aa13.39□□□□□ -0.27
EXOSC1-202ENST00000370885 RAB11FIP3O75154 756 aa13.39□□□□□ -0.27
EXOSC1-202ENST00000370885 SPP2Q13103 211 aa13.39□□□□□ -0.27
EXOSC1-202ENST00000370885 CLASRPQ8N2M8 674 aaKnown RBP13.39□□□□□ -0.27
EXOSC1-202ENST00000370885 ARMC5Q96C12 935 aa13.39□□□□□ -0.27
EXOSC1-202ENST00000370885 LOC285556D6RIA3 1793 aa13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 GOLIM4O00461 696 aa13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 HMMRO75330 724 aa13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 PDE6AP16499 860 aa13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 PLCG2P16885 1265 aa13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 DNAJC2Q99543 621 aaKnown RBP13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 NOL10Q9BSC4 688 aaKnown RBP13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 HERC5Q9UII4 1024 aaKnown RBP13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 DDX60LQ5H9U9 1706 aaKnown RBP13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 MGAMO43451 1857 aa13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
EXOSC1-202ENST00000370885 SMIM22K7EJ46 135 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 IGSF3O75054 1194 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 GDF11O95390 407 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 IFIT2P09913 472 aaKnown RBP13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 PSMC4P43686 418 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 PLCD1P51178 756 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 HMGCS2P54868 508 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 MAP3K12Q12852 859 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 FASTKD5Q7L8L6 764 aaKnown RBP13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 FOXP4Q8IVH2 680 aaPredicted RBP13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 SH3TC2Q8TF17 1288 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 ZNF333Q96JL9 665 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 DHX36Q9H2U1 1008 aaKnown RBP13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 PCDHB15Q9Y5E8 787 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 DOCK3Q8IZD9 2030 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 ZNF532Q9HCE3 1301 aa13.37□□□□□ -0.27
EXOSC1-202ENST00000370885 RBBP6Q7Z6E9 1792 aaKnown RBP13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 USP17L5A8MUK1 530 aa13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 PEX10O60683 326 aa13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 ATP5JP18859 108 aa13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 EN2P19622 333 aaPredicted RBP13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 OSBPP22059 807 aa13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 SLC9C2Q5TAH2 1124 aa13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 POTEEQ6S8J3 1075 aa13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 ZNF280CQ8ND82 737 aa13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 PARK7Q99497 189 aaKnown RBP13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 GABRQQ9UN88 632 aa13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 AGTPBP1Q9UPW5 1226 aa13.36□□□□□ -0.27
EXOSC1-202ENST00000370885 MYCP01106 439 aaPredicted RBP13.35□□□□□ -0.27
EXOSC1-202ENST00000370885 SH3D19Q5HYK7 790 aa13.35□□□□□ -0.27
EXOSC1-202ENST00000370885 ERICH6BQ5W0A0 696 aa13.35□□□□□ -0.27
EXOSC1-202ENST00000370885 LCORLQ8N3X6 602 aa13.35□□□□□ -0.27
EXOSC1-202ENST00000370885 HAUS7Q99871 368 aa13.35□□□□□ -0.27
EXOSC1-202ENST00000370885 WDR18Q9BV38 432 aa13.35□□□□□ -0.27
EXOSC1-202ENST00000370885 DCTPP1Q9H773 170 aa13.35□□□□□ -0.27
EXOSC1-202ENST00000370885 PAG1Q9NWQ8 432 aa13.35□□□□□ -0.27
EXOSC1-202ENST00000370885 SRRDQ9UH36 339 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms