RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 TMTC2Q8N394 836 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 ARHGEF2Q92974 986 aaKnown RBP14.17□□□□□ -0.14
GPC4-201ENST00000370828 IQCGQ9H095 443 aaKnown RBP14.17□□□□□ -0.14
GPC4-201ENST00000370828 SUFUQ9UMX1 484 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 IQGAP2Q13576 1575 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 ABCA10Q8WWZ4 1543 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 CETN1Q12798 172 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 CFAP221Q4G0U5 840 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 DIS3L2Q8IYB7 885 aaKnown RBP14.17□□□□□ -0.14
GPC4-201ENST00000370828 LINS1Q8NG48 757 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 PHKBQ93100 1093 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 ZDHHC9Q9Y397 364 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 SSH2Q76I76 1423 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 SLC5A1P13866 664 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 CCDC144BQ3MJ40 725 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 CC2D1AQ6P1N0 951 aaPredicted RBP14.17□□□□□ -0.14
GPC4-201ENST00000370828 ZKSCAN3Q9BRR0 538 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 FTOQ9C0B1 505 aaKnown RBP eCLIP14.17□□□□□ -0.14
GPC4-201ENST00000370828 CWC25Q9NXE8 425 aaPredicted RBP14.17□□□□□ -0.14
GPC4-201ENST00000370828 ANAPC4Q9UJX5 808 aa14.17□□□□□ -0.14
GPC4-201ENST00000370828 GPTP24298 496 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 CALCOCO2Q13137 446 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 GKAP1Q5VSY0 366 aaPredicted RBP14.16□□□□□ -0.14
GPC4-201ENST00000370828 KRT40Q6A162 431 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 ZNF710Q8N1W2 664 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 CSGALNACT2Q8N6G5 542 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 TPX2Q9ULW0 747 aaKnown RBP14.16□□□□□ -0.14
GPC4-201ENST00000370828 PLVAPQ9BX97 442 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 TRIM6Q9C030 488 aaPredicted RBP14.16□□□□□ -0.14
GPC4-201ENST00000370828 KAT14Q9H8E8 782 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.16□□□□□ -0.14
GPC4-201ENST00000370828 CTNNA1P35221 906 aaKnown RBP14.16□□□□□ -0.14
GPC4-201ENST00000370828 FCHSD1Q86WN1 690 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 EDC3Q96F86 508 aaKnown RBP14.16□□□□□ -0.14
GPC4-201ENST00000370828 CNNM2Q9H8M5 875 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 FAM114A2Q9NRY5 505 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 RBM6P78332 1123 aaKnown RBP14.16□□□□□ -0.14
GPC4-201ENST00000370828 RNF10Q8N5U6 811 aaKnown RBP14.16□□□□□ -0.14
GPC4-201ENST00000370828 MGARPQ8TDB4 240 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 SATB2Q9UPW6 733 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 TCOF1Q13428 1488 aaKnown RBP14.16□□□□□ -0.14
GPC4-201ENST00000370828 TTC21AQ8NDW8 1320 aa14.16□□□□□ -0.14
GPC4-201ENST00000370828 TCP11Q8WWU5 503 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 ANKRD7Q92527 254 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 ESR2Q92731 530 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 TRIM4Q9C037 500 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 HIP1RO75146 1068 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 CYP2C19P33261 490 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 MAP7D1Q3KQU3 841 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 TBC1D5Q92609 795 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 SLC4A4Q9Y6R1 1079 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 LARGE1O95461 756 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 PRPHP41219 470 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 TRMT1LQ7Z2T5 733 aaKnown RBP14.15□□□□□ -0.14
GPC4-201ENST00000370828 OR8K1Q8NGG5 319 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 A0A1W2PP64 1363 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 ZNF131P52739 623 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 TOM1L2Q6ZVM7 507 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 CCDC51Q96ER9 411 aa14.15□□□□□ -0.14
GPC4-201ENST00000370828 IFIH1Q9BYX4 1025 aaKnown RBP14.15□□□□□ -0.14
GPC4-201ENST00000370828 DDX21Q9NR30 783 aaKnown RBP eCLIP14.15□□□□□ -0.14
GPC4-201ENST00000370828 UTP11Q9Y3A2 253 aaKnown RBP14.15□□□□□ -0.14
GPC4-201ENST00000370828 ZPR1O75312 459 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 DBNDD2Q9BQY9 259 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 KCNF1Q9H3M0 494 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 KIAA0586Q9BVV6 1533 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 B4E1Z4 1266 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 GJC1P36383 396 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 SESN3P58005 492 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 TYW1BQ6NUM6 668 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 CLEC17AQ6ZS10 378 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 HEATR3Q7Z4Q2 680 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 MYL10Q9BUA6 226 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 LRRC27Q9C0I9 530 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 TRMT112Q9UI30 125 aaKnown RBP14.14□□□□□ -0.15
GPC4-201ENST00000370828 KIF14Q15058 1648 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 DTHD1Q6ZMT9 781 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 SIRT2Q8IXJ6 389 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 LSG1Q9H089 658 aaKnown RBP14.14□□□□□ -0.15
GPC4-201ENST00000370828 BLZF1Q9H2G9 400 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 RIMS2Q9UQ26 1411 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 IL15P40933 162 aaPredicted RBP14.14□□□□□ -0.15
GPC4-201ENST00000370828 PDCD2Q16342 344 aaPredicted RBP14.14□□□□□ -0.15
GPC4-201ENST00000370828 INF2Q27J81 1249 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 GSTA5Q7RTV2 222 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 PHF23Q9BUL5 403 aaPredicted RBP14.14□□□□□ -0.15
GPC4-201ENST00000370828 CLIC4Q9Y696 253 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 SBNO1A3KN83 1393 aa14.14□□□□□ -0.15
GPC4-201ENST00000370828 A0A0D9SFI3 127 aa14.13□□□□□ -0.15
GPC4-201ENST00000370828 CHL1O00533 1208 aa14.13□□□□□ -0.15
GPC4-201ENST00000370828 SMIM24O75264 130 aa14.13□□□□□ -0.15
GPC4-201ENST00000370828 TIMM10P62072 90 aa14.13□□□□□ -0.15
GPC4-201ENST00000370828 NELFBQ8WX92 580 aa14.13□□□□□ -0.15
GPC4-201ENST00000370828 STX8Q9UNK0 236 aa14.13□□□□□ -0.15
GPC4-201ENST00000370828 SRLQ86TD4 932 aa14.13□□□□□ -0.15
GPC4-201ENST00000370828 CCDC63Q8NA47 563 aa14.13□□□□□ -0.15
GPC4-201ENST00000370828 MRRFQ96E11 262 aaKnown RBP14.13□□□□□ -0.15
GPC4-201ENST00000370828 RMDN2Q96LZ7 410 aa14.13□□□□□ -0.15
GPC4-201ENST00000370828 CLIC6Q96NY7 704 aa14.13□□□□□ -0.15
GPC4-201ENST00000370828 GBP5Q96PP8 586 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms