RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 BIRC3Q13489 604 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 ARPP21Q9UBL0 812 aaPredicted RBP22.03■■□□□ 1.12
LMO4-202ENST00000370544 LRWD1Q9UFC0 647 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 MYOM2P54296 1465 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 MLKLQ8NB16 471 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 MLH3Q9UHC1 1453 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 CCDC169A6NNP5 214 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 RHOXF2BP0C7M4 288 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 RPS8P62241 208 aaKnown RBP22.02■■□□□ 1.12
LMO4-202ENST00000370544 TFAP4Q01664 338 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 VWA3BQ502W6 1294 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 WDR44Q5JSH3 913 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 RHOXF2Q9BQY4 288 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 KIF4AO95239 1232 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 GSPT1P15170 499 aaKnown RBP22.02■■□□□ 1.12
LMO4-202ENST00000370544 NLRP12P59046 1061 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 TNNC1P63316 161 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 BEND3Q5T5X7 828 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 SNX29Q8TEQ0 813 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 FANCCQ00597 558 aa22.02■■□□□ 1.12
LMO4-202ENST00000370544 KRT5P13647 590 aa22.01■■□□□ 1.11
LMO4-202ENST00000370544 TTLL7Q6ZT98 887 aa22.01■■□□□ 1.11
LMO4-202ENST00000370544 SSH2Q76I76 1423 aa22.01■■□□□ 1.11
LMO4-202ENST00000370544 HARSP12081 509 aaKnown RBP22.01■■□□□ 1.11
LMO4-202ENST00000370544 TERF1P54274 439 aa22.01■■□□□ 1.11
LMO4-202ENST00000370544 TCP10Q12799 353 aa22.01■■□□□ 1.11
LMO4-202ENST00000370544 FAM47AQ5JRC9 791 aa22.01■■□□□ 1.11
LMO4-202ENST00000370544 IFT81Q8WYA0 676 aa22.01■■□□□ 1.11
LMO4-202ENST00000370544 CFAP65Q6ZU64 1925 aaKnown RBP22.01■■□□□ 1.11
LMO4-202ENST00000370544 ARID4AP29374 1257 aaPredicted RBP22.01■■□□□ 1.11
LMO4-202ENST00000370544 CBX8Q9HC52 389 aa22.01■■□□□ 1.11
LMO4-202ENST00000370544 ARHGEF35A5YM69 484 aa22■■□□□ 1.11
LMO4-202ENST00000370544 APBB1IPQ7Z5R6 666 aaPredicted RBP22■■□□□ 1.11
LMO4-202ENST00000370544 GADD45BO75293 160 aaPredicted RBP22■■□□□ 1.11
LMO4-202ENST00000370544 ALDH1B1P30837 517 aa22■■□□□ 1.11
LMO4-202ENST00000370544 ZBTB38Q8NAP3 1195 aaPredicted RBP22■■□□□ 1.11
LMO4-202ENST00000370544 KIFAP3Q92845 792 aa22■■□□□ 1.11
LMO4-202ENST00000370544 GTF3C6Q969F1 213 aa22■■□□□ 1.11
LMO4-202ENST00000370544 ME3Q16798 604 aa22■■□□□ 1.11
LMO4-202ENST00000370544 C6orf163Q5TEZ5 329 aa22■■□□□ 1.11
LMO4-202ENST00000370544 CYP26C1Q6V0L0 522 aa22■■□□□ 1.11
LMO4-202ENST00000370544 SSX2IPQ9Y2D8 614 aa22■■□□□ 1.11
LMO4-202ENST00000370544 DTNBO60941 627 aa22■■□□□ 1.11
LMO4-202ENST00000370544 CALCRLQ16602 461 aa22■■□□□ 1.11
LMO4-202ENST00000370544 EAF2Q96CJ1 260 aaPredicted RBP22■■□□□ 1.11
LMO4-202ENST00000370544 A0A0D9SFI3 127 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 MYCLP12524 364 aaPredicted RBP21.99■■□□□ 1.11
LMO4-202ENST00000370544 VAV2P52735 878 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 USH1GQ495M9 461 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 SEL1L2Q5TEA6 688 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 MTUS1Q9ULD2 1270 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 CETN3O15182 167 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 ATP2C2O75185 946 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 POSTNQ15063 836 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 PPP1R7Q15435 360 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 MAP3K9P80192 1104 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 IFT74Q96LB3 600 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 VPS54Q9P1Q0 977 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 EXOC7Q9UPT5 735 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 AATKQ6ZMQ8 1374 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 hCG_1642624A0A1W2PR95 340 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 EFCAB6Q5THR3 1501 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 MAGI2Q86UL8 1455 aa21.99■■□□□ 1.11
LMO4-202ENST00000370544 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.98■■□□□ 1.11
LMO4-202ENST00000370544 PLEKHF1Q96S99 279 aa21.98■■□□□ 1.11
LMO4-202ENST00000370544 ERBB4Q15303 1308 aa21.98■■□□□ 1.11
LMO4-202ENST00000370544 MTRF1LQ9UGC7 380 aaKnown RBP21.98■■□□□ 1.11
LMO4-202ENST00000370544 TNFAIP3P21580 790 aa21.98■■□□□ 1.11
LMO4-202ENST00000370544 ZNF75DP51815 510 aa21.98■■□□□ 1.11
LMO4-202ENST00000370544 DKC1O60832 514 aaKnown RBP eCLIP21.98■■□□□ 1.11
LMO4-202ENST00000370544 ATRIPQ8WXE1 791 aa21.98■■□□□ 1.11
LMO4-202ENST00000370544 HOOK2Q96ED9 719 aa21.98■■□□□ 1.11
LMO4-202ENST00000370544 PCCAP05165 728 aaPredicted RBP21.97■■□□□ 1.11
LMO4-202ENST00000370544 PTH1RQ03431 593 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 OTUD6BQ8N6M0 293 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 SELENOSQ9BQE4 189 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 DDX39AO00148 427 aaKnown RBP21.97■■□□□ 1.11
LMO4-202ENST00000370544 TTF2Q9UNY4 1162 aaKnown RBP21.97■■□□□ 1.11
LMO4-202ENST00000370544 ZBED4O75132 1171 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 CABP7Q86V35 215 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 MBD5Q9P267 1494 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 STRN3Q13033 797 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 ASIC2Q16515 512 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 ZNF654Q8IZM8 581 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 CCDC114Q96M63 670 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 HAUS7Q99871 368 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 METP08581 1390 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 SPATA31E1Q6ZUB1 1445 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 DNM3Q9UQ16 869 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 PLEKHG1Q9ULL1 1385 aa21.97■■□□□ 1.11
LMO4-202ENST00000370544 ZNF274Q96GC6 653 aaPredicted RBP21.96■■□□□ 1.11
LMO4-202ENST00000370544 TUBBP07437 444 aa21.96■■□□□ 1.11
LMO4-202ENST00000370544 PDE6BP35913 854 aa21.96■■□□□ 1.11
LMO4-202ENST00000370544 DYMQ7RTS9 669 aa21.96■■□□□ 1.11
LMO4-202ENST00000370544 ZNF445P59923 1031 aa21.96■■□□□ 1.11
LMO4-202ENST00000370544 MFSD14BQ5SR56 506 aa21.96■■□□□ 1.11
LMO4-202ENST00000370544 IFNL3Q8IZI9 196 aa21.96■■□□□ 1.11
LMO4-202ENST00000370544 NUP58Q9BVL2 599 aa21.96■■□□□ 1.11
LMO4-202ENST00000370544 LMBRD1Q9NUN5 540 aa21.96■■□□□ 1.11
LMO4-202ENST00000370544 USP40Q9NVE5 1235 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms