RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ZSWIM5Q9P217 1185 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 PARP3Q9Y6F1 533 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 SALL1Q9NSC2 1324 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 GOLGA6L6A8MZA4 724 aa11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 IFIT3O14879 490 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 LDHBP07195 334 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 DDX41Q9UJV9 622 aaKnown RBP11.56□□□□□ -0.56
PRPF38B-203ENST00000370025 ERICH2A1L162 156 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 UBE2HP62256 183 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 ELF2Q15723 593 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 CPLX2Q6PUV4 134 aaKnown RBP11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 SYNE3Q6ZMZ3 975 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 KIF18AQ8NI77 898 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 IGDCC4Q8TDY8 1250 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 ZNF384Q8TF68 577 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 INCENPQ9NQS7 918 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 ANAPC4Q9UJX5 808 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 JAG2Q9Y219 1238 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 IRX3P78415 501 aaPredicted RBP11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 GSTO1P78417 241 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 HPS5Q9UPZ3 1129 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 CCDC69A6NI79 296 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 PDE6BP35913 854 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 LIFRP42702 1097 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 METAP2P50579 478 aaKnown RBP eCLIP11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 KMT5BQ4FZB7 885 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 SP8Q8IXZ3 490 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 MTA3Q9BTC8 594 aa11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 AATFQ9NY61 560 aaKnown RBP eCLIP11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 ZNF215Q9UL58 517 aaPredicted RBP11.55□□□□□ -0.56
PRPF38B-203ENST00000370025 TIAM2Q8IVF5 1701 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 PPEF1O14829 653 aaPredicted RBP11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 CDKL5O76039 1030 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 GABPB1Q06547 395 aaPredicted RBP11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 SGMS1Q86VZ5 419 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 SCAND2PQ9GZW5 306 aaPredicted RBP11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 C6orf229H3BNL8 230 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 ZBTB43O43298 467 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 LDHCP07864 332 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 MMP10P09238 476 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 NPR1P16066 1061 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 FAM173BQ6P4H8 233 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 APOA5Q6Q788 366 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 STK11IPQ8N1F8 1099 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 TMTC2Q8N394 836 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 ESR2Q92731 530 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 GPR101Q96P66 508 aaPredicted RBP11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 NOL10Q9BSC4 688 aaKnown RBP11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 TMX4Q9H1E5 349 aaPredicted RBP11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 CD209Q9NNX6 404 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 ATP8A2Q9NTI2 1148 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 ALDH1B1P30837 517 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 SLC51AQ86UW1 340 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 RAB11FIP4Q86YS3 637 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 NEK11Q8NG66 645 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 LY9Q9HBG7 655 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 ORC3Q9UBD5 711 aaPredicted RBP11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 SLC12A7Q9Y666 1083 aa11.54□□□□□ -0.56
PRPF38B-203ENST00000370025 EP400Q96L91 3159 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 CTIFO43310 598 aaKnown RBP11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 PCP11498 1178 aaKnown RBP11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 HNRNPH2P55795 449 aaKnown RBP11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 ARID5BQ14865 1188 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 TBC1D16Q8TBP0 767 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 SLC3A2P08195 630 aaKnown RBP11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 RESTQ13127 1097 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 WTAPQ15007 396 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 UVSSAQ2YD98 709 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 UBAC1Q9BSL1 405 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 MAST2Q6P0Q8 1798 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 BAG3O95817 575 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 SRGNP10124 158 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 MICU3Q86XE3 530 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 CFAP45Q9UL16 551 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 ATP6V0A2Q9Y487 856 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 TACC3Q9Y6A5 838 aa11.53□□□□□ -0.56
PRPF38B-203ENST00000370025 GOLGA8AA7E2F4 631 aa11.52□□□□□ -0.56
PRPF38B-203ENST00000370025 USP17L12C9JPN9 530 aa11.52□□□□□ -0.56
PRPF38B-203ENST00000370025 USP17L21D6R901 530 aa11.52□□□□□ -0.56
PRPF38B-203ENST00000370025 FDPSP14324 419 aaKnown RBP11.52□□□□□ -0.56
PRPF38B-203ENST00000370025 IL1R1P14778 569 aa11.52□□□□□ -0.56
PRPF38B-203ENST00000370025 C8orf76Q96K31 380 aa11.52□□□□□ -0.56
PRPF38B-203ENST00000370025 POLLQ9UGP5 575 aa11.52□□□□□ -0.56
PRPF38B-203ENST00000370025 CTR9Q6PD62 1173 aa11.52□□□□□ -0.57
PRPF38B-203ENST00000370025 FBXO38Q6PIJ6 1188 aa11.52□□□□□ -0.57
PRPF38B-203ENST00000370025 FILIP1Q7Z7B0 1213 aa11.52□□□□□ -0.57
PRPF38B-203ENST00000370025 SPATA32Q96LK8 384 aa11.52□□□□□ -0.57
PRPF38B-203ENST00000370025 DCP1AQ9NPI6 582 aaPredicted RBP11.52□□□□□ -0.57
PRPF38B-203ENST00000370025 CALCOCO1Q9P1Z2 691 aa11.52□□□□□ -0.57
PRPF38B-203ENST00000370025 TFIP11Q9UBB9 837 aaKnown RBP11.52□□□□□ -0.57
PRPF38B-203ENST00000370025 ELP1O95163 1332 aa11.52□□□□□ -0.57
PRPF38B-203ENST00000370025 BAZ2AQ9UIF9 1905 aaKnown RBP11.52□□□□□ -0.57
PRPF38B-203ENST00000370025 USP27XA6NNY8 438 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 C10orf67Q8IYJ2 551 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 ADD1P35611 737 aaKnown RBP11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 CEP135Q66GS9 1140 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 MSL1Q68DK7 614 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 TBC1D22AQ8WUA7 517 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 MASTLQ96GX5 879 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms