RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 FAM177BA6PVY3 158 aa8.21□□□□□ -1.1
CSDE1-204ENST00000369530 IGHMBP2P38935 993 aaKnown RBP8.21□□□□□ -1.1
CSDE1-204ENST00000369530 C12orf42Q96LP6 360 aa8.21□□□□□ -1.1
CSDE1-204ENST00000369530 FAM53CQ9NYF3 392 aa8.21□□□□□ -1.1
CSDE1-204ENST00000369530 CCDC66A2RUB6 948 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 IGHDP01880 384 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 NKX3-2P78367 333 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 MECOMQ03112 1051 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 MAP1SQ66K74 1059 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-204ENST00000369530 PRO3102Q9H379 93 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 A0A0G2JLL6 359 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-204ENST00000369530 CNMDO75829 334 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 CDK11BP21127 795 aaKnown RBP8.2□□□□□ -1.1
CSDE1-204ENST00000369530 MNX1P50219 401 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-204ENST00000369530 EIF6P56537 245 aaKnown RBP8.2□□□□□ -1.1
CSDE1-204ENST00000369530 NFIAQ12857 509 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 TTLL5Q6EMB2 1281 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 PI16Q6UXB8 463 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 PRRT2Q7Z6L0 340 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-204ENST00000369530 REM2Q8IYK8 340 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-204ENST00000369530 TBC1D22AQ8WUA7 517 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 KIAA1671Q9BY89 1806 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 FOXN1O15353 648 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 CHGBP05060 677 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 SLFN14P0C7P3 912 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 UBTFL1P0CB47 393 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-204ENST00000369530 SLC5A1P13866 664 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 CAPN2P17655 700 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 DPY19L2Q6NUT2 758 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 HELBQ8NG08 1087 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-204ENST00000369530 KCNB2Q92953 911 aa8.2□□□□□ -1.1
CSDE1-204ENST00000369530 SPDYE5A6NIY4 337 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 RAB11FIP3O75154 756 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 NASPP49321 788 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-204ENST00000369530 CFAP100Q494V2 611 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 ZNF804AQ7Z570 1209 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 APOBEC3FQ8IUX4 373 aaKnown RBP8.19□□□□□ -1.1
CSDE1-204ENST00000369530 REPS2Q8NFH8 660 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 FAM151AQ8WW52 585 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 IL25Q9H293 177 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 GGA3Q9NZ52 723 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 HDAC5Q9UQL6 1122 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 LAMA3Q16787 3333 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 ANGEL2Q5VTE6 544 aaKnown RBP8.19□□□□□ -1.1
CSDE1-204ENST00000369530 DBNDD2Q9BQY9 259 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 OGFRQ9NZT2 677 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 KIF3AQ9Y496 699 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 DOCK5Q9H7D0 1870 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 DDTLA6NHG4 134 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-204ENST00000369530 CTIFO43310 598 aaKnown RBP8.19□□□□□ -1.1
CSDE1-204ENST00000369530 CCDC57Q2TAC2 916 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 SPATA5Q8NB90 893 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 RHPN1Q8TCX5 695 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 SNX21Q969T3 373 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 ANAPC4Q9UJX5 808 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 DDX19BQ9UMR2 479 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 MYH6P13533 1939 aa8.19□□□□□ -1.1
CSDE1-204ENST00000369530 MFAP1P55081 439 aaKnown RBP8.18□□□□□ -1.1
CSDE1-204ENST00000369530 TIMM10P62072 90 aa8.18□□□□□ -1.1
CSDE1-204ENST00000369530 SPRYD7Q5W111 196 aa8.18□□□□□ -1.1
CSDE1-204ENST00000369530 TIGD1Q96MW7 591 aa8.18□□□□□ -1.1
CSDE1-204ENST00000369530 IGF2BP3O00425 579 aaKnown RBP eCLIP8.18□□□□□ -1.13e-6■■■□□ 19.1
CSDE1-204ENST00000369530 IPO8O15397 1037 aaKnown RBP8.18□□□□□ -1.1
CSDE1-204ENST00000369530 NUCB1Q02818 461 aa8.18□□□□□ -1.1
CSDE1-204ENST00000369530 RAB3GAP1Q15042 981 aa8.18□□□□□ -1.1
CSDE1-204ENST00000369530 SPTLC3Q9NUV7 552 aa8.18□□□□□ -1.1
CSDE1-204ENST00000369530 WWC3Q9ULE0 1092 aa8.18□□□□□ -1.1
CSDE1-204ENST00000369530 DENND2AQ9ULE3 1009 aa8.18□□□□□ -1.1
CSDE1-204ENST00000369530 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.18□□□□□ -1.1
CSDE1-204ENST00000369530 RANBP2P49792 3224 aaKnown RBP8.17□□□□□ -1.1
CSDE1-204ENST00000369530 FLT1P17948 1338 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 ADD2P35612 726 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 GHRHRQ02643 423 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 ZC3H12CQ9C0D7 883 aaKnown RBP8.17□□□□□ -1.1
CSDE1-204ENST00000369530 CGNQ9P2M7 1197 aaKnown RBP8.17□□□□□ -1.1
CSDE1-204ENST00000369530 RIMBP2O15034 1052 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 PTMAP06454 111 aaKnown RBP8.17□□□□□ -1.1
CSDE1-204ENST00000369530 BCRP11274 1271 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 GTF2IP78347 998 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 KLHL40Q2TBA0 621 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 WDR66Q8TBY9 1149 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 WNK4Q96J92 1243 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 TTC41PQ6P2S7 1318 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 SMIM22K7EJ46 135 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 SRGAP3O43295 1099 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 SBK1Q52WX2 424 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 KIAA1755Q5JYT7 1200 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 NBPF12Q5TAG4 269 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-204ENST00000369530 DEFB129Q9H1M3 183 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 EPB41L4AQ9HCS5 686 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-204ENST00000369530 CCDC39Q9UFE4 941 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 SYNPO2Q9UMS6 1093 aa8.17□□□□□ -1.1
CSDE1-204ENST00000369530 COL4A4P53420 1690 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-204ENST00000369530 MCCP23508 829 aa8.16□□□□□ -1.1
CSDE1-204ENST00000369530 SHMT1P34896 483 aa8.16□□□□□ -1.1
CSDE1-204ENST00000369530 C17orf99Q6UX52 265 aa8.16□□□□□ -1.1
CSDE1-204ENST00000369530 WDR18Q9BV38 432 aa8.16□□□□□ -1.1
CSDE1-204ENST00000369530 ZNF330Q9Y3S2 320 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-204ENST00000369530 SEC24BO95487 1268 aa8.16□□□□□ -1.1
CSDE1-204ENST00000369530 TBC1D10BQ4KMP7 808 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms