RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 ERICH2A1L162 156 aa19.72■□□□□ 0.75
PHGDH-202ENST00000369409 PTPDC1A2A3K4 754 aa19.72■□□□□ 0.75
PHGDH-202ENST00000369409 DDX11L8A8MPP1 907 aa19.72■□□□□ 0.75
PHGDH-202ENST00000369409 ORC4O43929 436 aa19.72■□□□□ 0.75
PHGDH-202ENST00000369409 LIFRP42702 1097 aa19.72■□□□□ 0.75
PHGDH-202ENST00000369409 CRKP46108 304 aa19.72■□□□□ 0.75
PHGDH-202ENST00000369409 WTAPQ15007 396 aa19.72■□□□□ 0.75
PHGDH-202ENST00000369409 HHIPL2Q6UWX4 724 aa19.72■□□□□ 0.75
PHGDH-202ENST00000369409 DDX11Q96FC9 970 aa19.72■□□□□ 0.75
PHGDH-202ENST00000369409 CD2APQ9Y5K6 639 aa19.72■□□□□ 0.75
PHGDH-202ENST00000369409 TCHHQ07283 1943 aa19.72■□□□□ 0.75
PHGDH-202ENST00000369409 PDE4BQ07343 736 aa19.71■□□□□ 0.75
PHGDH-202ENST00000369409 MICU3Q86XE3 530 aa19.71■□□□□ 0.75
PHGDH-202ENST00000369409 MTA3Q9BTC8 594 aa19.71■□□□□ 0.75
PHGDH-202ENST00000369409 TNKSO95271 1327 aa19.71■□□□□ 0.75
PHGDH-202ENST00000369409 VPS37CA5D8V6 355 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-202ENST00000369409 CCDC69A6NI79 296 aa19.71■□□□□ 0.75
PHGDH-202ENST00000369409 POLR3DP05423 398 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-202ENST00000369409 ZSCAN22P10073 491 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-202ENST00000369409 RXRAP19793 462 aa19.71■□□□□ 0.75
PHGDH-202ENST00000369409 LARP1BQ659C4 914 aaKnown RBP19.71■□□□□ 0.75
PHGDH-202ENST00000369409 PDCP20941 246 aa19.7■□□□□ 0.74
PHGDH-202ENST00000369409 METAP2P50579 478 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■□□□ 12.1
PHGDH-202ENST00000369409 PLCD1P51178 756 aa19.7■□□□□ 0.74
PHGDH-202ENST00000369409 PICALMQ13492 652 aa19.7■□□□□ 0.74
PHGDH-202ENST00000369409 CHMP4CQ96CF2 233 aa19.7■□□□□ 0.74
PHGDH-202ENST00000369409 DYNLL2Q96FJ2 89 aa19.7■□□□□ 0.74
PHGDH-202ENST00000369409 CHAMP1Q96JM3 812 aa19.7■□□□□ 0.74
PHGDH-202ENST00000369409 MYL10Q9BUA6 226 aa19.7■□□□□ 0.74
PHGDH-202ENST00000369409 MTMR6Q9Y217 621 aa19.7■□□□□ 0.74
PHGDH-202ENST00000369409 ZBTB43O43298 467 aa19.69■□□□□ 0.74
PHGDH-202ENST00000369409 PPFIA3O75145 1194 aa19.69■□□□□ 0.74
PHGDH-202ENST00000369409 HMGN5P82970 282 aaKnown RBP19.69■□□□□ 0.74
PHGDH-202ENST00000369409 USP40Q9NVE5 1235 aa19.69■□□□□ 0.74
PHGDH-202ENST00000369409 SLC12A7Q9Y666 1083 aa19.69■□□□□ 0.74
PHGDH-202ENST00000369409 DHX16O60231 1041 aaKnown RBP19.69■□□□□ 0.74
PHGDH-202ENST00000369409 IARSP41252 1262 aaKnown RBP19.69■□□□□ 0.74
PHGDH-202ENST00000369409 SEC23AQ15436 765 aa19.69■□□□□ 0.74
PHGDH-202ENST00000369409 APOBEC3HQ6NTF7 200 aaKnown RBP19.69■□□□□ 0.74
PHGDH-202ENST00000369409 CDC42EP5Q6NZY7 148 aa19.69■□□□□ 0.74
PHGDH-202ENST00000369409 IQCA1Q86XH1 822 aa19.69■□□□□ 0.74
PHGDH-202ENST00000369409 FAM184AQ8NB25 1140 aa19.69■□□□□ 0.74
PHGDH-202ENST00000369409 ZDHHC15Q96MV8 337 aa19.69■□□□□ 0.74
PHGDH-202ENST00000369409 ZSCAN10Q96SZ4 725 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-202ENST00000369409 BCS1LQ9Y276 419 aa19.69■□□□□ 0.74
PHGDH-202ENST00000369409 PCDHAC2Q9Y5I4 1007 aa19.69■□□□□ 0.74
PHGDH-202ENST00000369409 GOLGA8AA7E2F4 631 aa19.68■□□□□ 0.74
PHGDH-202ENST00000369409 WDHD1O75717 1129 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-202ENST00000369409 F13A1P00488 732 aa19.68■□□□□ 0.74
PHGDH-202ENST00000369409 FAM47AQ5JRC9 791 aa19.68■□□□□ 0.74
PHGDH-202ENST00000369409 MCTP1Q6DN14 999 aa19.68■□□□□ 0.74
PHGDH-202ENST00000369409 CDC37L1Q7L3B6 337 aa19.68■□□□□ 0.74
PHGDH-202ENST00000369409 CCDC144CPQ8IYA2 1237 aa19.68■□□□□ 0.74
PHGDH-202ENST00000369409 ENAHQ8N8S7 591 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-202ENST00000369409 VPS33BQ9H267 617 aa19.68■□□□□ 0.74
PHGDH-202ENST00000369409 TAOK3Q9H2K8 898 aa19.68■□□□□ 0.74
PHGDH-202ENST00000369409 MYH15Q9Y2K3 1946 aa19.68■□□□□ 0.74
PHGDH-202ENST00000369409 CPLX1O14810 134 aa19.67■□□□□ 0.74
PHGDH-202ENST00000369409 RAD17O75943 681 aa19.67■□□□□ 0.74
PHGDH-202ENST00000369409 RBM5P52756 815 aaKnown RBP eCLIP19.67■□□□□ 0.74
PHGDH-202ENST00000369409 HDLBPQ00341 1268 aaKnown RBP19.67■□□□□ 0.74
PHGDH-202ENST00000369409 NIM1KQ8IY84 436 aa19.67■□□□□ 0.74
PHGDH-202ENST00000369409 SLC44A5Q8NCS7 719 aa19.67■□□□□ 0.74
PHGDH-202ENST00000369409 DDX4Q9NQI0 724 aaKnown RBP19.67■□□□□ 0.74
PHGDH-202ENST00000369409 NID2Q14112 1375 aa19.67■□□□□ 0.74
PHGDH-202ENST00000369409 TSPY2A6NKD2 308 aa19.67■□□□□ 0.74
PHGDH-202ENST00000369409 GOLGA6L22H0YM25 854 aa19.67■□□□□ 0.74
PHGDH-202ENST00000369409 FOXD4L6Q3SYB3 417 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-202ENST00000369409 FOXD4L3Q6VB84 417 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-202ENST00000369409 SYNE3Q6ZMZ3 975 aa19.67■□□□□ 0.74
PHGDH-202ENST00000369409 NLGN2Q8NFZ4 835 aa19.67■□□□□ 0.74
PHGDH-202ENST00000369409 MYH6P13533 1939 aa19.66■□□□□ 0.74
PHGDH-202ENST00000369409 PSMD14O00487 310 aa19.66■□□□□ 0.74
PHGDH-202ENST00000369409 RSBN1LQ6PCB5 846 aaPredicted RBP19.66■□□□□ 0.74
PHGDH-202ENST00000369409 TMTC2Q8N394 836 aa19.66■□□□□ 0.74
PHGDH-202ENST00000369409 MRIQ9BWK5 157 aa19.66■□□□□ 0.74
PHGDH-202ENST00000369409 MKNK2Q9HBH9 465 aa19.66■□□□□ 0.74
PHGDH-202ENST00000369409 SERPINA10Q9UK55 444 aa19.66■□□□□ 0.74
PHGDH-202ENST00000369409 KIF3AQ9Y496 699 aa19.66■□□□□ 0.74
PHGDH-202ENST00000369409 SIPA1L1O43166 1804 aa19.66■□□□□ 0.74
PHGDH-202ENST00000369409 MYO3BQ8WXR4 1341 aa19.66■□□□□ 0.74
PHGDH-202ENST00000369409 NFKBIEO00221 500 aa19.65■□□□□ 0.74
PHGDH-202ENST00000369409 NMT2O60551 498 aa19.65■□□□□ 0.74
PHGDH-202ENST00000369409 CDC27P30260 824 aa19.65■□□□□ 0.74
PHGDH-202ENST00000369409 ADD1P35611 737 aaKnown RBP19.65■□□□□ 0.74
PHGDH-202ENST00000369409 FOSBP53539 338 aa19.65■□□□□ 0.74
PHGDH-202ENST00000369409 IFIT1BQ5T764 474 aaKnown RBP19.65■□□□□ 0.74
PHGDH-202ENST00000369409 ZNF654Q8IZM8 581 aa19.65■□□□□ 0.74
PHGDH-202ENST00000369409 PDIA4P13667 645 aaKnown RBP19.65■□□□□ 0.74
PHGDH-202ENST00000369409 C16orf86Q6ZW13 317 aa19.65■□□□□ 0.74
PHGDH-202ENST00000369409 ZNRF3Q9ULT6 936 aa19.65■□□□□ 0.74
PHGDH-202ENST00000369409 FDPSP14324 419 aaKnown RBP19.64■□□□□ 0.73
PHGDH-202ENST00000369409 NFIAQ12857 509 aa19.64■□□□□ 0.73
PHGDH-202ENST00000369409 OSBPL5Q9H0X9 879 aaPredicted RBP19.64■□□□□ 0.73
PHGDH-202ENST00000369409 H3BQV1 296 aa19.63■□□□□ 0.73
PHGDH-202ENST00000369409 VIL1P09327 827 aaKnown RBP19.63■□□□□ 0.73
PHGDH-202ENST00000369409 CACNB3P54284 484 aa19.63■□□□□ 0.73
PHGDH-202ENST00000369409 TFAP4Q01664 338 aa19.63■□□□□ 0.73
PHGDH-202ENST00000369409 CFAP100Q494V2 611 aa19.63■□□□□ 0.73
PHGDH-202ENST00000369409 IFFO2Q5TF58 517 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms