RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 TNS3Q68CZ2 1445 aa14.4□□□□□ -0.1
LINC01561-201ENST00000369071 ADKP55263 362 aaKnown RBP14.4□□□□□ -0.1
LINC01561-201ENST00000369071 PPP2R3AQ06190 1150 aa14.4□□□□□ -0.1
LINC01561-201ENST00000369071 VGLL2Q8N8G2 317 aa14.4□□□□□ -0.1
LINC01561-201ENST00000369071 STRBPQ96SI9 672 aaKnown RBP14.4□□□□□ -0.1
LINC01561-201ENST00000369071 INCENPQ9NQS7 918 aa14.4□□□□□ -0.1
LINC01561-201ENST00000369071 BTBD18B2RXH4 712 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 MMP1P03956 469 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 PDE6AP16499 860 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 IFNAR1P17181 557 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 NR1I3Q14994 352 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 SERTAD1Q9UHV2 236 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 DACH1Q9UI36 760 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 TACC3Q9Y6A5 838 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 MYO5AQ9Y4I1 1855 aaKnown RBP14.39□□□□□ -0.11
LINC01561-201ENST00000369071 POLR2DO15514 142 aaKnown RBP14.39□□□□□ -0.11
LINC01561-201ENST00000369071 IDH1O75874 414 aaKnown RBP14.39□□□□□ -0.11
LINC01561-201ENST00000369071 GUCY1A2P33402 732 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 LDHAL6AQ6ZMR3 332 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 SYNE4Q8N205 404 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 TRIML1Q8N9V2 468 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 WASF1Q92558 559 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 ZSWIM5Q9P217 1185 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 WWC3Q9ULE0 1092 aa14.39□□□□□ -0.11
LINC01561-201ENST00000369071 CDK11BP21127 795 aaKnown RBP14.38□□□□□ -0.11
LINC01561-201ENST00000369071 ITGA6P23229 1130 aa14.38□□□□□ -0.11
LINC01561-201ENST00000369071 DIS3L2Q8IYB7 885 aaKnown RBP14.38□□□□□ -0.11
LINC01561-201ENST00000369071 TRMT44Q8IYL2 757 aaKnown RBP14.38□□□□□ -0.11
LINC01561-201ENST00000369071 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
LINC01561-201ENST00000369071 TTLL11Q8NHH1 800 aa14.38□□□□□ -0.11
LINC01561-201ENST00000369071 SMARCE1Q969G3 411 aa14.38□□□□□ -0.11
LINC01561-201ENST00000369071 RAI14Q9P0K7 980 aa14.38□□□□□ -0.11
LINC01561-201ENST00000369071 SLC12A7Q9Y666 1083 aa14.38□□□□□ -0.11
LINC01561-201ENST00000369071 CDHR2Q9BYE9 1310 aa14.38□□□□□ -0.11
LINC01561-201ENST00000369071 IFIT3O14879 490 aaKnown RBP14.37□□□□□ -0.11
LINC01561-201ENST00000369071 ACTN4O43707 911 aaKnown RBP14.37□□□□□ -0.11
LINC01561-201ENST00000369071 ARID4AP29374 1257 aaPredicted RBP14.37□□□□□ -0.11
LINC01561-201ENST00000369071 ZNF827Q17R98 1081 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 TEX35Q5T0J7 233 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 NUTM2AQ8IVF1 878 aaPredicted RBP14.37□□□□□ -0.11
LINC01561-201ENST00000369071 SPATA20Q8TB22 786 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 RABGGTAQ92696 567 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 FOXP1Q9H334 677 aaPredicted RBP14.37□□□□□ -0.11
LINC01561-201ENST00000369071 GREM2Q9H772 168 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 EPB41L4AQ9HCS5 686 aaPredicted RBP14.37□□□□□ -0.11
LINC01561-201ENST00000369071 SAMSN1Q9NSI8 373 aaKnown RBP14.37□□□□□ -0.11
LINC01561-201ENST00000369071 A0A1B0GTH6 734 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 PATL2C9JE40 543 aaKnown RBP14.37□□□□□ -0.11
LINC01561-201ENST00000369071 POLR3GO15318 223 aaPredicted RBP14.37□□□□□ -0.11
LINC01561-201ENST00000369071 RILPL1Q5EBL4 403 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 GRAMD1CQ8IYS0 662 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 DHX58Q96C10 678 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 DESI2Q9BSY9 194 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 PARD6BQ9BYG5 372 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 SEC31BQ9NQW1 1179 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 KCNJ14Q9UNX9 436 aa14.37□□□□□ -0.11
LINC01561-201ENST00000369071 ATF3P18847 181 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 PHKA1P46020 1223 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 PLCD1P51178 756 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 CTDSPL2Q05D32 466 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 SAFBQ15424 915 aaKnown RBP eCLIP14.36□□□□□ -0.11
LINC01561-201ENST00000369071 APTXQ7Z2E3 356 aaKnown RBP14.36□□□□□ -0.11
LINC01561-201ENST00000369071 IFNL3Q8IZI9 196 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 AIDAQ96BJ3 306 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 PANX2Q96RD6 677 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 TEX13AQ9BXU3 409 aaPredicted RBP14.36□□□□□ -0.11
LINC01561-201ENST00000369071 MRPL44Q9H9J2 332 aaKnown RBP14.36□□□□□ -0.11
LINC01561-201ENST00000369071 TBC1D2BQ9UPU7 963 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 PCDHB6Q9Y5E3 794 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 SRPRBQ9Y5M8 271 aaKnown RBP14.36□□□□□ -0.11
LINC01561-201ENST00000369071 PDE8BO95263 885 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 ERCC5P28715 1186 aaPredicted RBP14.36□□□□□ -0.11
LINC01561-201ENST00000369071 OAS2P29728 719 aaKnown RBP14.36□□□□□ -0.11
LINC01561-201ENST00000369071 HNRNPH2P55795 449 aaKnown RBP14.36□□□□□ -0.11
LINC01561-201ENST00000369071 MTF1Q14872 753 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 KARSQ15046 597 aaKnown RBP14.36□□□□□ -0.11
LINC01561-201ENST00000369071 KANK3Q6NY19 840 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 KIF6Q6ZMV9 814 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 GOLGA1Q92805 767 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 FUT8Q9BYC5 575 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 CNNM1Q9NRU3 951 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 ZNF330Q9Y3S2 320 aaPredicted RBP14.36□□□□□ -0.11
LINC01561-201ENST00000369071 SPATA31A3Q5VYP0 1347 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 WDR17Q8IZU2 1322 aa14.36□□□□□ -0.11
LINC01561-201ENST00000369071 TIAM2Q8IVF5 1701 aa14.35□□□□□ -0.11
LINC01561-201ENST00000369071 ANKRD18BA2A2Z9 1011 aa14.35□□□□□ -0.11
LINC01561-201ENST00000369071 AKR1B15C9JRZ8 316 aaPredicted RBP14.35□□□□□ -0.11
LINC01561-201ENST00000369071 SMC1AQ14683 1233 aaKnown RBP14.35□□□□□ -0.11
LINC01561-201ENST00000369071 ARFGAP3Q9NP61 516 aa14.35□□□□□ -0.11
LINC01561-201ENST00000369071 TULP2O00295 520 aa14.34□□□□□ -0.11
LINC01561-201ENST00000369071 UQCRFS1P1P0C7P4 283 aa14.34□□□□□ -0.11
LINC01561-201ENST00000369071 TXLNAP40222 546 aa14.34□□□□□ -0.11
LINC01561-201ENST00000369071 CTSWP56202 376 aa14.34□□□□□ -0.11
LINC01561-201ENST00000369071 AKNAD1Q5T1N1 836 aa14.34□□□□□ -0.11
LINC01561-201ENST00000369071 GIGYF2Q6Y7W6 1299 aaKnown RBP14.34□□□□□ -0.11
LINC01561-201ENST00000369071 USP49Q70CQ1 688 aa14.34□□□□□ -0.11
LINC01561-201ENST00000369071 CCDC12Q8WUD4 166 aaPredicted RBP14.34□□□□□ -0.11
LINC01561-201ENST00000369071 CNNM2Q9H8M5 875 aa14.34□□□□□ -0.11
LINC01561-201ENST00000369071 ZCCHC17Q9NP64 241 aaKnown RBP14.34□□□□□ -0.11
LINC01561-201ENST00000369071 SOWAHDA6NJG2 315 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms