RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 IGDCC4Q8TDY8 1250 aa22.84■■□□□ 1.25
CHTOP-204ENST00000368694 BRPF3Q9ULD4 1205 aa22.84■■□□□ 1.25
CHTOP-204ENST00000368694 FGRP09769 529 aa22.83■■□□□ 1.25
CHTOP-204ENST00000368694 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.83■■□□□ 1.25
CHTOP-204ENST00000368694 VIL1P09327 827 aaKnown RBP22.83■■□□□ 1.24
CHTOP-204ENST00000368694 PLCD1P51178 756 aa22.83■■□□□ 1.24
CHTOP-204ENST00000368694 NFKBIBQ15653 356 aa22.83■■□□□ 1.24
CHTOP-204ENST00000368694 TNPO1Q92973 898 aaKnown RBP22.83■■□□□ 1.24
CHTOP-204ENST00000368694 LY9Q9HBG7 655 aa22.83■■□□□ 1.24
CHTOP-204ENST00000368694 PCDHAC2Q9Y5I4 1007 aa22.83■■□□□ 1.24
CHTOP-204ENST00000368694 ROBO3Q96MS0 1386 aa22.83■■□□□ 1.24
CHTOP-204ENST00000368694 ORC4O43929 436 aa22.82■■□□□ 1.24
CHTOP-204ENST00000368694 WDHD1O75717 1129 aaPredicted RBP22.82■■□□□ 1.24
CHTOP-204ENST00000368694 WTAPQ15007 396 aa22.82■■□□□ 1.24
CHTOP-204ENST00000368694 DYNLL2Q96FJ2 89 aa22.82■■□□□ 1.24
CHTOP-204ENST00000368694 FHDC1Q9C0D6 1143 aaPredicted RBP22.82■■□□□ 1.24
CHTOP-204ENST00000368694 NCOA5Q9HCD5 579 aaKnown RBP22.82■■□□□ 1.24
CHTOP-204ENST00000368694 LIFRP42702 1097 aa22.81■■□□□ 1.24
CHTOP-204ENST00000368694 RASSF7Q02833 373 aa22.81■■□□□ 1.24
CHTOP-204ENST00000368694 IQCA1Q86XH1 822 aa22.81■■□□□ 1.24
CHTOP-204ENST00000368694 RAB11FIP4Q86YS3 637 aa22.81■■□□□ 1.24
CHTOP-204ENST00000368694 SENP2Q9HC62 589 aa22.81■■□□□ 1.24
CHTOP-204ENST00000368694 CCDC69A6NI79 296 aa22.81■■□□□ 1.24
CHTOP-204ENST00000368694 MTA3Q9BTC8 594 aa22.81■■□□□ 1.24
CHTOP-204ENST00000368694 MKNK2Q9HBH9 465 aa22.81■■□□□ 1.24
CHTOP-204ENST00000368694 DDX4Q9NQI0 724 aaKnown RBP22.81■■□□□ 1.24
CHTOP-204ENST00000368694 ZBTB12Q9Y330 459 aaPredicted RBP22.81■■□□□ 1.24
CHTOP-204ENST00000368694 LTBP3Q9NS15 1303 aa22.81■■□□□ 1.24
CHTOP-204ENST00000368694 CFAP100Q494V2 611 aa22.8■■□□□ 1.24
CHTOP-204ENST00000368694 HDAC9Q9UKV0 1011 aa22.8■■□□□ 1.24
CHTOP-204ENST00000368694 TNKSO95271 1327 aa22.8■■□□□ 1.24
CHTOP-204ENST00000368694 TSPY2A6NKD2 308 aa22.8■■□□□ 1.24
CHTOP-204ENST00000368694 CXCL9Q07325 125 aa22.8■■□□□ 1.24
CHTOP-204ENST00000368694 FAM47AQ5JRC9 791 aa22.8■■□□□ 1.24
CHTOP-204ENST00000368694 FOXD4L5Q5VV16 416 aaPredicted RBP22.8■■□□□ 1.24
CHTOP-204ENST00000368694 APOA5Q6Q788 366 aa22.8■■□□□ 1.24
CHTOP-204ENST00000368694 SGMS1Q86VZ5 419 aa22.8■■□□□ 1.24
CHTOP-204ENST00000368694 OGFOD1Q8N543 542 aa22.8■■□□□ 1.24
CHTOP-204ENST00000368694 FOXD4L4Q8WXT5 416 aaPredicted RBP22.8■■□□□ 1.24
CHTOP-204ENST00000368694 CHMP4CQ96CF2 233 aa22.8■■□□□ 1.24
CHTOP-204ENST00000368694 MICU3Q86XE3 530 aa22.79■■□□□ 1.24
CHTOP-204ENST00000368694 SLC12A7Q9Y666 1083 aa22.79■■□□□ 1.24
CHTOP-204ENST00000368694 JAK2O60674 1132 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 CIAPIN1Q6FI81 312 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 ZSCAN10Q96SZ4 725 aaPredicted RBP22.78■■□□□ 1.24
CHTOP-204ENST00000368694 LLPHQ9BRT6 129 aaKnown RBP22.78■■□□□ 1.24
CHTOP-204ENST00000368694 ZNF287Q9HBT7 754 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 HPS5Q9UPZ3 1129 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 UTRNP46939 3433 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 SYT1P21579 422 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 METAP2P50579 478 aaKnown RBP eCLIP22.78■■□□□ 1.24
CHTOP-204ENST00000368694 CACNB3P54284 484 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 SYNE3Q6ZMZ3 975 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 TMTC2Q8N394 836 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 SLC44A5Q8NCS7 719 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 GMLQ99445 158 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 OSBPL5Q9H0X9 879 aaPredicted RBP22.78■■□□□ 1.24
CHTOP-204ENST00000368694 ZDHHC9Q9Y397 364 aa22.78■■□□□ 1.24
CHTOP-204ENST00000368694 MYH8P13535 1937 aa22.77■■□□□ 1.24
CHTOP-204ENST00000368694 ZBTB43O43298 467 aa22.77■■□□□ 1.24
CHTOP-204ENST00000368694 DHX16O60231 1041 aaKnown RBP22.77■■□□□ 1.24
CHTOP-204ENST00000368694 RXRAP19793 462 aa22.77■■□□□ 1.24
CHTOP-204ENST00000368694 NFIAQ12857 509 aa22.77■■□□□ 1.24
CHTOP-204ENST00000368694 TTC6Q86TZ1 520 aa22.77■■□□□ 1.24
CHTOP-204ENST00000368694 NSUN7Q8NE18 718 aaKnown RBP22.77■■□□□ 1.24
CHTOP-204ENST00000368694 DDX11Q96FC9 970 aa22.77■■□□□ 1.24
CHTOP-204ENST00000368694 STX6O43752 255 aa22.77■■□□□ 1.23
CHTOP-204ENST00000368694 ENAHQ8N8S7 591 aaPredicted RBP22.77■■□□□ 1.23
CHTOP-204ENST00000368694 AGBL3Q8NEM8 1001 aa22.77■■□□□ 1.23
CHTOP-204ENST00000368694 MYL10Q9BUA6 226 aa22.77■■□□□ 1.23
CHTOP-204ENST00000368694 WDR33Q9C0J8 1336 aaKnown RBP22.76■■□□□ 1.23
CHTOP-204ENST00000368694 PTPDC1A2A3K4 754 aa22.76■■□□□ 1.23
CHTOP-204ENST00000368694 CPLX1O14810 134 aa22.76■■□□□ 1.23
CHTOP-204ENST00000368694 BRD1O95696 1058 aa22.76■■□□□ 1.23
CHTOP-204ENST00000368694 C16orf86Q6ZW13 317 aa22.76■■□□□ 1.23
CHTOP-204ENST00000368694 ZNF444Q8N0Y2 327 aaPredicted RBP22.76■■□□□ 1.23
CHTOP-204ENST00000368694 GBP4Q96PP9 640 aa22.76■■□□□ 1.23
CHTOP-204ENST00000368694 TDRD3Q9H7E2 651 aaKnown RBP22.76■■□□□ 1.23
CHTOP-204ENST00000368694 TFAP4Q01664 338 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 TCP10Q12799 353 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 TNIP1Q15025 636 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 SEC23AQ15436 765 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 IFIT1BQ5T764 474 aaKnown RBP22.75■■□□□ 1.23
CHTOP-204ENST00000368694 CCDC144CPQ8IYA2 1237 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 FAM184AQ8NB25 1140 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 CTDNEP1O95476 244 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 TSPY3P0CV98 308 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 TSPY8P0CW00 308 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 PDCP20941 246 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 CDK8P49336 464 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 NT5C2P49902 561 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 HMGN5P82970 282 aaKnown RBP22.75■■□□□ 1.23
CHTOP-204ENST00000368694 DLGAP5Q15398 846 aa22.75■■□□□ 1.23
CHTOP-204ENST00000368694 LARP1BQ659C4 914 aaKnown RBP22.75■■□□□ 1.23
CHTOP-204ENST00000368694 PRMT6Q96LA8 375 aaPredicted RBP22.75■■□□□ 1.23
CHTOP-204ENST00000368694 GOLGA8AA7E2F4 631 aa22.74■■□□□ 1.23
CHTOP-204ENST00000368694 NMT2O60551 498 aa22.74■■□□□ 1.23
CHTOP-204ENST00000368694 PPFIA3O75145 1194 aa22.74■■□□□ 1.23
CHTOP-204ENST00000368694 SMARCC2Q8TAQ2 1214 aa22.74■■□□□ 1.23
CHTOP-204ENST00000368694 VPS37CA5D8V6 355 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms