RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 LMOD3Q0VAK6 560 aa13.27□□□□□ -0.29
TUBE1-201ENST00000368657 SNX17Q15036 470 aa13.27□□□□□ -0.29
TUBE1-201ENST00000368657 SH3RF1Q7Z6J0 888 aa13.27□□□□□ -0.29
TUBE1-201ENST00000368657 PROCA1Q8NCQ7 364 aaPredicted RBP13.27□□□□□ -0.29
TUBE1-201ENST00000368657 TBC1D22AQ8WUA7 517 aa13.27□□□□□ -0.29
TUBE1-201ENST00000368657 PLA2G12BQ9BX93 195 aa13.27□□□□□ -0.29
TUBE1-201ENST00000368657 PHAXQ9H814 394 aaKnown RBP13.27□□□□□ -0.29
TUBE1-201ENST00000368657 MORF4L1Q9UBU8 362 aa13.27□□□□□ -0.29
TUBE1-201ENST00000368657 DDX20Q9UHI6 824 aaKnown RBP13.27□□□□□ -0.29
TUBE1-201ENST00000368657 MYO9BQ13459 2157 aa13.27□□□□□ -0.29
TUBE1-201ENST00000368657 PHF20L1A8MW92 1017 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 PPP2R1AP30153 589 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 HIBADHP31937 336 aaKnown RBP13.26□□□□□ -0.29
TUBE1-201ENST00000368657 RGS2P41220 211 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 EPHB4P54760 987 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 FPGSQ05932 587 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 AK9Q5TCS8 1911 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 HHIPL2Q6UWX4 724 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 CCDC129Q6ZRS4 1044 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 USP6NLQ92738 828 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 FBXL18Q96ME1 805 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 MYBBP1AQ9BQG0 1328 aaKnown RBP13.26□□□□□ -0.29
TUBE1-201ENST00000368657 PBX4Q9BYU1 374 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
TUBE1-201ENST00000368657 COG5Q9UP83 839 aa13.26□□□□□ -0.29
TUBE1-201ENST00000368657 PLXNB2O15031 1838 aa13.25□□□□□ -0.29
TUBE1-201ENST00000368657 ANKRD18BA2A2Z9 1011 aa13.25□□□□□ -0.29
TUBE1-201ENST00000368657 TRIM75PA6NK02 468 aa13.25□□□□□ -0.29
TUBE1-201ENST00000368657 H7C1W4 665 aa13.25□□□□□ -0.29
TUBE1-201ENST00000368657 TRIM60Q495X7 471 aa13.25□□□□□ -0.29
TUBE1-201ENST00000368657 TREML2Q5T2D2 321 aa13.25□□□□□ -0.29
TUBE1-201ENST00000368657 MFSD14CQ5VZR4 134 aa13.25□□□□□ -0.29
TUBE1-201ENST00000368657 KHSRPQ92945 711 aaKnown RBP eCLIP13.25□□□□□ -0.29
TUBE1-201ENST00000368657 MAST3O60307 1309 aa13.24□□□□□ -0.29
TUBE1-201ENST00000368657 KBTBD13C9JR72 458 aa13.24□□□□□ -0.29
TUBE1-201ENST00000368657 CTNND1O60716 968 aaKnown RBP13.24□□□□□ -0.29
TUBE1-201ENST00000368657 RAG1P15918 1043 aa13.24□□□□□ -0.29
TUBE1-201ENST00000368657 MAPK4P31152 587 aa13.24□□□□□ -0.29
TUBE1-201ENST00000368657 MSRAQ9UJ68 235 aa13.24□□□□□ -0.29
TUBE1-201ENST00000368657 KIAA0355O15063 1070 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 IGKV5-2P06315 115 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 ITGB8P26012 769 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 CNGA1P29973 690 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 NEXNQ0ZGT2 675 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 SKIV2LQ15477 1246 aaKnown RBP13.23□□□□□ -0.29
TUBE1-201ENST00000368657 RAB30Q15771 203 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 GRIK5Q16478 980 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 CCL14Q16627 93 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 CSPP1Q1MSJ5 1256 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 GPRC5AQ8NFJ5 357 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 FAM84BQ96KN1 310 aaPredicted RBP13.23□□□□□ -0.29
TUBE1-201ENST00000368657 UIMC1Q96RL1 719 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 SUGT1Q9Y2Z0 365 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
TUBE1-201ENST00000368657 RLFQ13129 1914 aa13.23□□□□□ -0.29
TUBE1-201ENST00000368657 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
TUBE1-201ENST00000368657 CLTBP09497 229 aa13.22□□□□□ -0.29
TUBE1-201ENST00000368657 PBX2P40425 430 aa13.22□□□□□ -0.29
TUBE1-201ENST00000368657 TLE2Q04725 743 aa13.22□□□□□ -0.29
TUBE1-201ENST00000368657 TCP10Q12799 353 aa13.22□□□□□ -0.29
TUBE1-201ENST00000368657 UBE4AQ14139 1066 aa13.22□□□□□ -0.29
TUBE1-201ENST00000368657 MORN1Q5T089 497 aa13.22□□□□□ -0.29
TUBE1-201ENST00000368657 GJC2Q5T442 439 aaPredicted RBP13.22□□□□□ -0.29
TUBE1-201ENST00000368657 CCDC174Q6PII3 467 aa13.22□□□□□ -0.29
TUBE1-201ENST00000368657 UBE3BQ7Z3V4 1068 aa13.22□□□□□ -0.29
TUBE1-201ENST00000368657 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
TUBE1-201ENST00000368657 APBA2Q99767 749 aa13.22□□□□□ -0.29
TUBE1-201ENST00000368657 ASCC2Q9H1I8 757 aaPredicted RBP13.22□□□□□ -0.29
TUBE1-201ENST00000368657 SLC28A3Q9HAS3 691 aa13.22□□□□□ -0.29
TUBE1-201ENST00000368657 MAP3K2Q9Y2U5 619 aa13.22□□□□□ -0.29
TUBE1-201ENST00000368657 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
TUBE1-201ENST00000368657 UTYO14607 1347 aa13.21□□□□□ -0.29
TUBE1-201ENST00000368657 PLIN1O60240 522 aa13.21□□□□□ -0.29
TUBE1-201ENST00000368657 ALADP13716 330 aa13.21□□□□□ -0.29
TUBE1-201ENST00000368657 GYG1P46976 350 aa13.21□□□□□ -0.29
TUBE1-201ENST00000368657 CLCN6P51797 869 aa13.21□□□□□ -0.29
TUBE1-201ENST00000368657 MAP3K10Q02779 954 aa13.21□□□□□ -0.29
TUBE1-201ENST00000368657 IFIT5Q13325 482 aaKnown RBP13.21□□□□□ -0.29
TUBE1-201ENST00000368657 EDC3Q96F86 508 aaKnown RBP13.21□□□□□ -0.29
TUBE1-201ENST00000368657 PTPRFP10586 1907 aa13.2□□□□□ -0.3
TUBE1-201ENST00000368657 KSR2Q6VAB6 950 aa13.2□□□□□ -0.3
TUBE1-201ENST00000368657 MICALL1Q8N3F8 863 aa13.2□□□□□ -0.3
TUBE1-201ENST00000368657 CHMP4AQ9BY43 222 aa13.2□□□□□ -0.3
TUBE1-201ENST00000368657 TBC1D2Q9BYX2 928 aa13.2□□□□□ -0.3
TUBE1-201ENST00000368657 DAGLAQ9Y4D2 1042 aa13.2□□□□□ -0.3
TUBE1-201ENST00000368657 REV3LO60673 3130 aa13.2□□□□□ -0.3
TUBE1-201ENST00000368657 PLXNA1Q9UIW2 1896 aa13.2□□□□□ -0.3
TUBE1-201ENST00000368657 CHD9Q3L8U1 2897 aa13.2□□□□□ -0.3
TUBE1-201ENST00000368657 FRMPD3Q5JV73 1810 aa13.2□□□□□ -0.3
TUBE1-201ENST00000368657 GRXCR1A8MXD5 290 aa13.19□□□□□ -0.3
TUBE1-201ENST00000368657 FRAT2O75474 233 aaPredicted RBP13.19□□□□□ -0.3
TUBE1-201ENST00000368657 RASIP1Q5U651 963 aa13.19□□□□□ -0.3
TUBE1-201ENST00000368657 GPR142Q7Z601 462 aa13.19□□□□□ -0.3
TUBE1-201ENST00000368657 PLEKHH3Q7Z736 793 aa13.19□□□□□ -0.3
TUBE1-201ENST00000368657 VPS37DQ86XT2 251 aa13.19□□□□□ -0.3
TUBE1-201ENST00000368657 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.19□□□□□ -0.3
TUBE1-201ENST00000368657 NEURL1BA8MQ27 555 aa13.18□□□□□ -0.3
TUBE1-201ENST00000368657 POU3F3P20264 500 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms