RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 MCM9Q9NXL9 1143 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 PCDHAC2Q9Y5I4 1007 aa12.41□□□□□ -0.42
TPM3-212ENST00000368533 TNS1Q9HBL0 1735 aaKnown RBP12.4□□□□□ -0.42
TPM3-212ENST00000368533 PTPDC1A2A3K4 754 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 PSDA5PKW4 1024 aaPredicted RBP12.4□□□□□ -0.42
TPM3-212ENST00000368533 CTDNEP1O95476 244 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 HMGB1P09429 215 aaKnown RBP12.4□□□□□ -0.42
TPM3-212ENST00000368533 ATP2B4P23634 1241 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 ADD1P35611 737 aaKnown RBP12.4□□□□□ -0.42
TPM3-212ENST00000368533 USP5P45974 858 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 TMEM67Q5HYA8 995 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 FLAD1Q8NFF5 587 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 DYNLL2Q96FJ2 89 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 AIFM3Q96NN9 605 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 ATP6V0A2Q9Y487 856 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 HOXA10P31260 410 aaPredicted RBP12.4□□□□□ -0.42
TPM3-212ENST00000368533 PICALMQ13492 652 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 CAMK4Q16566 473 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 NUP133Q8WUM0 1156 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 PIBF1Q8WXW3 757 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 PHKBQ93100 1093 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 ZBTB9Q96C00 473 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 MASTLQ96GX5 879 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 CRAMP1Q96RY5 1269 aa12.4□□□□□ -0.42
TPM3-212ENST00000368533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.4□□□□□ -0.43
TPM3-212ENST00000368533 IRX5P78411 483 aaPredicted RBP12.4□□□□□ -0.43
TPM3-212ENST00000368533 AKNAD1Q5T1N1 836 aa12.4□□□□□ -0.43
TPM3-212ENST00000368533 SLC44A5Q8NCS7 719 aa12.4□□□□□ -0.43
TPM3-212ENST00000368533 TMX4Q9H1E5 349 aaPredicted RBP12.4□□□□□ -0.43
TPM3-212ENST00000368533 BAZ2BQ9UIF8 2168 aaKnown RBP12.39□□□□□ -0.43
TPM3-212ENST00000368533 hCG_1642624A0A1W2PR95 340 aa12.39□□□□□ -0.43
TPM3-212ENST00000368533 H3BQV1 296 aa12.39□□□□□ -0.43
TPM3-212ENST00000368533 ADCY5O95622 1261 aa12.39□□□□□ -0.43
TPM3-212ENST00000368533 KRT85P78386 507 aa12.39□□□□□ -0.43
TPM3-212ENST00000368533 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
TPM3-212ENST00000368533 RIOK3O14730 519 aaKnown RBP12.38□□□□□ -0.43
TPM3-212ENST00000368533 CPLX1O14810 134 aa12.38□□□□□ -0.43
TPM3-212ENST00000368533 PDCP20941 246 aa12.38□□□□□ -0.43
TPM3-212ENST00000368533 CACNB3P54284 484 aa12.38□□□□□ -0.43
TPM3-212ENST00000368533 NAA30Q147X3 362 aaPredicted RBP12.38□□□□□ -0.43
TPM3-212ENST00000368533 AOC3Q16853 763 aa12.38□□□□□ -0.43
TPM3-212ENST00000368533 CTR9Q6PD62 1173 aa12.38□□□□□ -0.43
TPM3-212ENST00000368533 SP8Q8IXZ3 490 aa12.38□□□□□ -0.43
TPM3-212ENST00000368533 NSUN7Q8NE18 718 aaKnown RBP12.38□□□□□ -0.43
TPM3-212ENST00000368533 DCP1AQ9NPI6 582 aaPredicted RBP12.38□□□□□ -0.43
TPM3-212ENST00000368533 BTDP43251 543 aa12.38□□□□□ -0.43
TPM3-212ENST00000368533 KIAA0825Q8IV33 1275 aa12.38□□□□□ -0.43
TPM3-212ENST00000368533 WDR66Q8TBY9 1149 aa12.38□□□□□ -0.43
TPM3-212ENST00000368533 FTOQ9C0B1 505 aaKnown RBP eCLIP12.38□□□□□ -0.437e-6■■□□□ 12.9
TPM3-212ENST00000368533 ERICH4A6NGS2 130 aa12.37□□□□□ -0.43
TPM3-212ENST00000368533 ALDH1B1P30837 517 aa12.37□□□□□ -0.43
TPM3-212ENST00000368533 R3HDM1Q15032 1099 aaKnown RBP12.37□□□□□ -0.43
TPM3-212ENST00000368533 CERS5Q8N5B7 392 aa12.37□□□□□ -0.43
TPM3-212ENST00000368533 CHD4Q14839 1912 aa12.37□□□□□ -0.43
TPM3-212ENST00000368533 DOCK2Q92608 1830 aa12.37□□□□□ -0.43
TPM3-212ENST00000368533 PFKFB2O60825 505 aa12.37□□□□□ -0.43
TPM3-212ENST00000368533 CDC27P30260 824 aa12.37□□□□□ -0.43
TPM3-212ENST00000368533 TMEM87AQ8NBN3 555 aa12.37□□□□□ -0.43
TPM3-212ENST00000368533 PRIMPOLQ96LW4 560 aa12.37□□□□□ -0.43
TPM3-212ENST00000368533 CRNKL1Q9BZJ0 848 aaKnown RBP12.37□□□□□ -0.43
TPM3-212ENST00000368533 ANGEL1Q9UNK9 670 aaKnown RBP12.37□□□□□ -0.43
TPM3-212ENST00000368533 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
TPM3-212ENST00000368533 KLRG2A4D1S0 409 aaPredicted RBP12.37□□□□□ -0.43
TPM3-212ENST00000368533 SEMA3EO15041 775 aa12.37□□□□□ -0.43
TPM3-212ENST00000368533 RBM5P52756 815 aaKnown RBP eCLIP12.37□□□□□ -0.43
TPM3-212ENST00000368533 GNAT2P19087 354 aa12.36□□□□□ -0.43
TPM3-212ENST00000368533 HMGN5P82970 282 aaKnown RBP12.36□□□□□ -0.43
TPM3-212ENST00000368533 CKAP2LQ8IYA6 745 aa12.36□□□□□ -0.43
TPM3-212ENST00000368533 SPATA32Q96LK8 384 aa12.36□□□□□ -0.43
TPM3-212ENST00000368533 TTF2Q9UNY4 1162 aaKnown RBP12.36□□□□□ -0.43
TPM3-212ENST00000368533 SH2B2O14492 632 aaPredicted RBP12.36□□□□□ -0.43
TPM3-212ENST00000368533 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPM3-212ENST00000368533 SPC24Q8NBT2 197 aa12.36□□□□□ -0.43
TPM3-212ENST00000368533 COL11A2P13942 1736 aaPredicted RBP12.36□□□□□ -0.43
TPM3-212ENST00000368533 CCDC69A6NI79 296 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 PLCD1P51178 756 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 TTC6Q86TZ1 520 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 BICD2Q8TD16 824 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 NOL10Q9BSC4 688 aaKnown RBP12.35□□□□□ -0.43
TPM3-212ENST00000368533 UBAC1Q9BSL1 405 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 LY9Q9HBG7 655 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 SCAF8Q9UPN6 1271 aaKnown RBP12.35□□□□□ -0.43
TPM3-212ENST00000368533 SLX4Q8IY92 1834 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 MYH2Q9UKX2 1941 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 DPEP1P16444 411 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 SPTY2D1Q68D10 685 aaPredicted RBP12.35□□□□□ -0.43
TPM3-212ENST00000368533 APOA5Q6Q788 366 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 TEX11Q8IYF3 940 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 IGDCC4Q8TDY8 1250 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 GOLGA8AA7E2F4 631 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 POLR3DP05423 398 aaPredicted RBP12.35□□□□□ -0.43
TPM3-212ENST00000368533 FDPSP14324 419 aaKnown RBP12.35□□□□□ -0.43
TPM3-212ENST00000368533 RASGRP2Q7LDG7 609 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
TPM3-212ENST00000368533 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
TPM3-212ENST00000368533 ORC3Q9UBD5 711 aaPredicted RBP12.35□□□□□ -0.43
TPM3-212ENST00000368533 SLC12A7Q9Y666 1083 aa12.35□□□□□ -0.43
TPM3-212ENST00000368533 TNKSO95271 1327 aa12.34□□□□□ -0.43
TPM3-212ENST00000368533 CCDC192P0DO97 292 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms