RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 SNAP23O00161 211 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 SH2B2O14492 632 aaPredicted RBP9.33□□□□□ -0.92
CD46-208ENST00000367042 STX10O60499 249 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 MBD4O95243 580 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 TFRCP02786 760 aaKnown RBP9.33□□□□□ -0.92
CD46-208ENST00000367042 ITGA6P23229 1130 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 RTN1Q16799 776 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 LONRF2Q1L5Z9 754 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 MFSD6Q6ZSS7 791 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 USP49Q70CQ1 688 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 MAGEB6Q8N7X4 407 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 MIGA1Q8NAN2 632 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 NUP88Q99567 741 aaPredicted RBP9.33□□□□□ -0.92
CD46-208ENST00000367042 ARMT1Q9H993 441 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 WWC3Q9ULE0 1092 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 PCDHB6Q9Y5E3 794 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 RGPD5Q99666 1765 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 LMO7Q8WWI1 1683 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 NEDD4P46934 1319 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 TBC1D8O95759 1140 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 CAPN2P17655 700 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 RAD51AP2Q09MP3 1159 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 TC2NQ8N9U0 490 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 MRPL44Q9H9J2 332 aaKnown RBP9.33□□□□□ -0.92
CD46-208ENST00000367042 PDE11AQ9HCR9 933 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 INTS13Q9NVM9 706 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 TMEM51Q9NW97 253 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 CWC15Q9P013 229 aaKnown RBP9.33□□□□□ -0.92
CD46-208ENST00000367042 MAPK8IP1Q9UQF2 711 aa9.33□□□□□ -0.92
CD46-208ENST00000367042 UBN2Q6ZU65 1347 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 A0A0U1RQJ8 604 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 FOXP2O15409 715 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 RANBP6O60518 1105 aaKnown RBP9.32□□□□□ -0.92
CD46-208ENST00000367042 BMP6P22004 513 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 KCNJ6P48051 423 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 WTAPQ15007 396 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 LRP10Q7Z4F1 713 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 GOLGA6L1Q8N7Z2 621 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 ATRIPQ8WXE1 791 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 WASF1Q92558 559 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 UBAC1Q9BSL1 405 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 ZSWIM5Q9P217 1185 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 MRFAP1Q9Y605 127 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 DCCP43146 1447 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 N4BP2Q86UW6 1770 aaPredicted RBP9.32□□□□□ -0.92
CD46-208ENST00000367042 N4BP3O15049 544 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 ERLIN1O75477 346 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 ZRANB2O95218 330 aaKnown RBP eCLIP9.32□□□□□ -0.922e-7■■■□□ 16.1
CD46-208ENST00000367042 GTF2E1P29083 439 aaPredicted RBP9.32□□□□□ -0.92
CD46-208ENST00000367042 PHKA1P46020 1223 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 FAM193AP78312 1265 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 RBL2Q08999 1139 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 PTPAQ15257 358 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 MLKLQ8NB16 471 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 VPS16Q9H269 839 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 GREM2Q9H772 168 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 SUGCTQ9HAC7 445 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 PIH1D3Q9NQM4 214 aaKnown RBP9.32□□□□□ -0.92
CD46-208ENST00000367042 PRDM11Q9NQV5 511 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 KCND1Q9NSA2 647 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 TMEM94Q12767 1356 aa9.32□□□□□ -0.92
CD46-208ENST00000367042 ANKRD18BA2A2Z9 1011 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 TXLNAP40222 546 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 GDAP1L1Q96MZ0 367 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 CDC5LQ99459 802 aaKnown RBP9.31□□□□□ -0.92
CD46-208ENST00000367042 CSRNP2Q9H175 543 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 ABCF2Q9UG63 623 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 TRMT112Q9UI30 125 aaKnown RBP9.31□□□□□ -0.92
CD46-208ENST00000367042 MTMR7Q9Y216 660 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 HPSEQ9Y251 543 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 CTAGE9A4FU28 777 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 EIF3JO75822 258 aaKnown RBP9.31□□□□□ -0.92
CD46-208ENST00000367042 PDE6AP16499 860 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 CASP14P31944 242 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 ADD2P35612 726 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 MAP3K9P80192 1104 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 ACRBPQ8NEB7 543 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 RABGGTAQ92696 567 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 EPSTI1Q96J88 318 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 TMEM87BQ96K49 555 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 VPS54Q9P1Q0 977 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 ADAM21Q9UKJ8 722 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 STRCQ7RTU9 1775 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 PRKAB2O43741 272 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 PRDM1O75626 825 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 CIAO1O76071 339 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 TTF1Q15361 905 aaPredicted RBP9.31□□□□□ -0.92
CD46-208ENST00000367042 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 ZCRB1Q8TBF4 217 aaKnown RBP9.31□□□□□ -0.92
CD46-208ENST00000367042 OXER1Q8TDS5 423 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 MAP3K14Q99558 947 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 HINFPQ9BQA5 517 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 BLZF1Q9H2G9 400 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 LRP2BPQ9P2M1 347 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 GUCA1BQ9UMX6 200 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 CTNND2Q9UQB3 1225 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 SYNRGQ9UMZ2 1314 aa9.31□□□□□ -0.92
CD46-208ENST00000367042 ZNF174Q15697 407 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 RILPL1Q5EBL4 403 aa9.3□□□□□ -0.92
CD46-208ENST00000367042 SLC35F6Q8N357 371 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms