RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 FAM163AQ96GL9 167 aaPredicted RBP17.5■□□□□ 0.39
NEK2-201ENST00000366998 MKRN1Q9UHC7 482 aaKnown RBP17.5■□□□□ 0.39
NEK2-201ENST00000366998 SUGT1Q9Y2Z0 365 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 MYH1P12882 1939 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 ECM29Q5VYK3 1845 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 GAKO14976 1311 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 ORC4O43929 436 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 CDC27P30260 824 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 KRT85P78386 507 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 GUCY1B3Q02153 619 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 RESTQ13127 1097 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 CERS5Q8N5B7 392 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
NEK2-201ENST00000366998 MXD3Q9BW11 206 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 SAP30BPQ9UHR5 308 aaKnown RBP17.5■□□□□ 0.39
NEK2-201ENST00000366998 TTF2Q9UNY4 1162 aaKnown RBP17.5■□□□□ 0.39
NEK2-201ENST00000366998 FOCADQ5VW36 1801 aa17.49■□□□□ 0.39
NEK2-201ENST00000366998 GADD45BO75293 160 aaPredicted RBP17.49■□□□□ 0.39
NEK2-201ENST00000366998 POLR3DP05423 398 aaPredicted RBP17.49■□□□□ 0.39
NEK2-201ENST00000366998 C12orf60Q5U649 245 aa17.49■□□□□ 0.39
NEK2-201ENST00000366998 PODNQ7Z5L7 613 aa17.49■□□□□ 0.39
NEK2-201ENST00000366998 ZSCAN16Q9H4T2 348 aaPredicted RBP17.49■□□□□ 0.39
NEK2-201ENST00000366998 DAGLAQ9Y4D2 1042 aa17.49■□□□□ 0.39
NEK2-201ENST00000366998 SEC23AQ15436 765 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 TPRNQ4KMQ1 711 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 ZNF654Q8IZM8 581 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 C7orf43Q8WVR3 580 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 C8orf76Q96K31 380 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 ADAMTSL1Q8N6G6 1762 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 SCN9AQ15858 1988 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 C21orf2O43822 256 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 ECE2O60344 883 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 RTN1Q16799 776 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 FAM47AQ5JRC9 791 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 IFIT1BQ5T764 474 aaKnown RBP17.48■□□□□ 0.39
NEK2-201ENST00000366998 CC2D2BQ6DHV5 1058 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 CCDC125Q86Z20 511 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 ENAHQ8N8S7 591 aaPredicted RBP17.48■□□□□ 0.39
NEK2-201ENST00000366998 NUP133Q8WUM0 1156 aa17.48■□□□□ 0.39
NEK2-201ENST00000366998 DDX60LQ5H9U9 1706 aaKnown RBP17.48■□□□□ 0.39
NEK2-201ENST00000366998 TSPY2A6NKD2 308 aa17.47■□□□□ 0.39
NEK2-201ENST00000366998 RHBDL3P58872 404 aa17.47■□□□□ 0.39
NEK2-201ENST00000366998 AOC3Q16853 763 aa17.47■□□□□ 0.39
NEK2-201ENST00000366998 TTLL6Q8N841 843 aa17.47■□□□□ 0.39
NEK2-201ENST00000366998 PHKBQ93100 1093 aa17.47■□□□□ 0.39
NEK2-201ENST00000366998 DYNLL2Q96FJ2 89 aa17.47■□□□□ 0.39
NEK2-201ENST00000366998 FAM217BQ9NTX9 383 aaPredicted RBP17.47■□□□□ 0.39
NEK2-201ENST00000366998 RBM27Q9P2N5 1060 aaKnown RBP17.47■□□□□ 0.39
NEK2-201ENST00000366998 NID2Q14112 1375 aa17.47■□□□□ 0.39
NEK2-201ENST00000366998 ROBO3Q96MS0 1386 aa17.47■□□□□ 0.39
NEK2-201ENST00000366998 FLT1P17948 1338 aa17.46■□□□□ 0.39
NEK2-201ENST00000366998 IARSP41252 1262 aaKnown RBP17.46■□□□□ 0.39
NEK2-201ENST00000366998 SCNN1DP51172 638 aa17.46■□□□□ 0.39
NEK2-201ENST00000366998 SUPT20HQ8NEM7 779 aa17.46■□□□□ 0.39
NEK2-201ENST00000366998 KCNQ5Q9NR82 932 aa17.46■□□□□ 0.39
NEK2-201ENST00000366998 TAOK2Q9UL54 1235 aa17.46■□□□□ 0.39
NEK2-201ENST00000366998 ZBTB7AO95365 584 aa17.46■□□□□ 0.38
NEK2-201ENST00000366998 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.38
NEK2-201ENST00000366998 MKNK2Q9HBH9 465 aa17.46■□□□□ 0.38
NEK2-201ENST00000366998 TFIP11Q9UBB9 837 aaKnown RBP17.46■□□□□ 0.38
NEK2-201ENST00000366998 KIF13BQ9NQT8 1826 aa17.45■□□□□ 0.38
NEK2-201ENST00000366998 MYH6P13533 1939 aa17.45■□□□□ 0.38
NEK2-201ENST00000366998 DPEP1P16444 411 aa17.45■□□□□ 0.38
NEK2-201ENST00000366998 RCAN1P53805 252 aa17.45■□□□□ 0.38
NEK2-201ENST00000366998 UBE2HP62256 183 aa17.45■□□□□ 0.38
NEK2-201ENST00000366998 SSRP1Q08945 709 aaKnown RBP17.45■□□□□ 0.38
NEK2-201ENST00000366998 NTRK3Q16288 839 aa17.45■□□□□ 0.38
NEK2-201ENST00000366998 CATIPQ7Z7H3 387 aa17.45■□□□□ 0.38
NEK2-201ENST00000366998 ALG1Q9BT22 464 aa17.45■□□□□ 0.38
NEK2-201ENST00000366998 SLC26A6Q9BXS9 759 aa17.45■□□□□ 0.38
NEK2-201ENST00000366998 ZNF646O15015 1829 aaPredicted RBP17.44■□□□□ 0.38
NEK2-201ENST00000366998 SNED1Q8TER0 1413 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 CCDC196A0A1B0GTZ2 297 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 GOLGA6L3A6NEY3 463 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 NMT2O60551 498 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 PLCD1P51178 756 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 TEKT1Q969V4 418 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 PPIP5K2O43314 1243 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 IFNAR1P17181 557 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 TFAP4Q01664 338 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 KIAA2012Q0VF49 1180 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 PICALMQ13492 652 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 CCDC93Q567U6 631 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 STRIP1Q5VSL9 837 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 TTC6Q86TZ1 520 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 FANCBQ8NB91 859 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 FBXO18Q8NFZ0 1043 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 SPATA32Q96LK8 384 aa17.44■□□□□ 0.38
NEK2-201ENST00000366998 SCAND2PQ9GZW5 306 aaPredicted RBP17.44■□□□□ 0.38
NEK2-201ENST00000366998 USP17L3A6NCW0 530 aa17.43■□□□□ 0.38
NEK2-201ENST00000366998 USP17L4A6NCW7 530 aa17.43■□□□□ 0.38
NEK2-201ENST00000366998 ZSCAN23Q3MJ62 389 aa17.43■□□□□ 0.38
NEK2-201ENST00000366998 USP17L1Q7RTZ2 530 aa17.43■□□□□ 0.38
NEK2-201ENST00000366998 TRIM22Q8IYM9 498 aa17.43■□□□□ 0.38
NEK2-201ENST00000366998 SLC44A5Q8NCS7 719 aa17.43■□□□□ 0.38
NEK2-201ENST00000366998 AIFM3Q96NN9 605 aa17.43■□□□□ 0.38
NEK2-201ENST00000366998 GJB4Q9NTQ9 266 aa17.43■□□□□ 0.38
NEK2-201ENST00000366998 TMEM63CQ9P1W3 806 aa17.43■□□□□ 0.38
NEK2-201ENST00000366998 ATF5Q9Y2D1 282 aaPredicted RBP17.43■□□□□ 0.38
NEK2-201ENST00000366998 STK36Q9NRP7 1315 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms