RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 EDC3Q96F86 508 aaKnown RBP18.6■□□□□ 0.57
PRKN-203ENST00000366894 R3HDMLQ9H3Y0 253 aa18.6■□□□□ 0.57
PRKN-203ENST00000366894 AK9Q5TCS8 1911 aa18.6■□□□□ 0.57
PRKN-203ENST00000366894 CDK5RAP2Q96SN8 1893 aa18.59■□□□□ 0.57
PRKN-203ENST00000366894 TRIM6-TRIM34B2RNG4 842 aa18.59■□□□□ 0.57
PRKN-203ENST00000366894 HIP1O00291 1037 aa18.59■□□□□ 0.57
PRKN-203ENST00000366894 DYNLL1P63167 89 aaKnown RBP18.59■□□□□ 0.57
PRKN-203ENST00000366894 MAP3K10Q02779 954 aa18.59■□□□□ 0.57
PRKN-203ENST00000366894 AMOTL1Q8IY63 956 aa18.59■□□□□ 0.57
PRKN-203ENST00000366894 PI4K2BQ8TCG2 481 aa18.59■□□□□ 0.57
PRKN-203ENST00000366894 FSD1Q9BTV5 496 aa18.59■□□□□ 0.57
PRKN-203ENST00000366894 CFHR5Q9BXR6 569 aa18.59■□□□□ 0.57
PRKN-203ENST00000366894 CRNKL1Q9BZJ0 848 aaKnown RBP18.59■□□□□ 0.57
PRKN-203ENST00000366894 CSADQ9Y600 493 aa18.59■□□□□ 0.57
PRKN-203ENST00000366894 COL2A1P02458 1487 aaPredicted RBP18.58■□□□□ 0.57
PRKN-203ENST00000366894 ZNF532Q9HCE3 1301 aa18.58■□□□□ 0.57
PRKN-203ENST00000366894 MANSC4A6NHS7 340 aaPredicted RBP18.58■□□□□ 0.56
PRKN-203ENST00000366894 SPDYE5A6NIY4 337 aa18.58■□□□□ 0.56
PRKN-203ENST00000366894 PHF20L1A8MW92 1017 aa18.58■□□□□ 0.56
PRKN-203ENST00000366894 RNF113AO15541 343 aaKnown RBP18.58■□□□□ 0.56
PRKN-203ENST00000366894 ADD2P35612 726 aa18.58■□□□□ 0.56
PRKN-203ENST00000366894 USP5P45974 858 aa18.58■□□□□ 0.56
PRKN-203ENST00000366894 PLEKHM2Q8IWE5 1019 aa18.58■□□□□ 0.56
PRKN-203ENST00000366894 MS4A4AQ96JQ5 239 aa18.58■□□□□ 0.56
PRKN-203ENST00000366894 OSBPL5Q9H0X9 879 aaPredicted RBP18.58■□□□□ 0.56
PRKN-203ENST00000366894 TAOK2Q9UL54 1235 aa18.58■□□□□ 0.56
PRKN-203ENST00000366894 SALL3Q9BXA9 1300 aa18.57■□□□□ 0.56
PRKN-203ENST00000366894 TESPA1A2RU30 521 aaPredicted RBP18.57■□□□□ 0.56
PRKN-203ENST00000366894 IGF2BP3O00425 579 aaKnown RBP eCLIP18.57■□□□□ 0.56
PRKN-203ENST00000366894 ALDH1A1P00352 501 aa18.57■□□□□ 0.56
PRKN-203ENST00000366894 GNAT2P19087 354 aa18.57■□□□□ 0.56
PRKN-203ENST00000366894 PTPN18Q99952 460 aa18.57■□□□□ 0.56
PRKN-203ENST00000366894 FOCADQ5VW36 1801 aa18.57■□□□□ 0.56
PRKN-203ENST00000366894 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
PRKN-203ENST00000366894 MFAP1P55081 439 aaKnown RBP18.56■□□□□ 0.56
PRKN-203ENST00000366894 ERO1BQ86YB8 467 aa18.56■□□□□ 0.56
PRKN-203ENST00000366894 MIGA1Q8NAN2 632 aa18.56■□□□□ 0.56
PRKN-203ENST00000366894 TGFBRAP1Q8WUH2 860 aa18.56■□□□□ 0.56
PRKN-203ENST00000366894 OTUD5Q96G74 571 aa18.56■□□□□ 0.56
PRKN-203ENST00000366894 TRIM34Q9BYJ4 488 aa18.56■□□□□ 0.56
PRKN-203ENST00000366894 ATP8A2Q9NTI2 1148 aa18.56■□□□□ 0.56
PRKN-203ENST00000366894 SIPA1L1O43166 1804 aa18.56■□□□□ 0.56
PRKN-203ENST00000366894 TCRBV5S4A2TA0A5A2 114 aa18.55■□□□□ 0.56
PRKN-203ENST00000366894 INHBEP58166 350 aa18.55■□□□□ 0.56
PRKN-203ENST00000366894 NOL9Q5SY16 702 aaKnown RBP18.55■□□□□ 0.56
PRKN-203ENST00000366894 TTC6Q86TZ1 520 aa18.55■□□□□ 0.56
PRKN-203ENST00000366894 IFNL1Q8IU54 200 aa18.55■□□□□ 0.56
PRKN-203ENST00000366894 FOXP4Q8IVH2 680 aaPredicted RBP18.55■□□□□ 0.56
PRKN-203ENST00000366894 OTUD7AQ8TE49 926 aaPredicted RBP18.55■□□□□ 0.56
PRKN-203ENST00000366894 APPBP2Q92624 585 aa18.55■□□□□ 0.56
PRKN-203ENST00000366894 RILPL2Q969X0 211 aa18.55■□□□□ 0.56
PRKN-203ENST00000366894 PI4KBQ9UBF8 816 aa18.55■□□□□ 0.56
PRKN-203ENST00000366894 HTTP42858 3142 aa18.54■□□□□ 0.56
PRKN-203ENST00000366894 FLT1P17948 1338 aa18.54■□□□□ 0.56
PRKN-203ENST00000366894 TBC1D12O60347 775 aa18.54■□□□□ 0.56
PRKN-203ENST00000366894 TSHZ3Q63HK5 1081 aa18.54■□□□□ 0.56
PRKN-203ENST00000366894 MAPKAPK5Q8IW41 473 aa18.54■□□□□ 0.56
PRKN-203ENST00000366894 BRI3BPQ8WY22 251 aa18.54■□□□□ 0.56
PRKN-203ENST00000366894 RIOK1Q9BRS2 568 aaKnown RBP18.54■□□□□ 0.56
PRKN-203ENST00000366894 FAM196BA6NMK8 535 aa18.53■□□□□ 0.56
PRKN-203ENST00000366894 IRF6O14896 467 aa18.53■□□□□ 0.56
PRKN-203ENST00000366894 CHGBP05060 677 aa18.53■□□□□ 0.56
PRKN-203ENST00000366894 PPIL2Q13356 520 aa18.53■□□□□ 0.56
PRKN-203ENST00000366894 SLFNL1Q499Z3 407 aa18.53■□□□□ 0.56
PRKN-203ENST00000366894 NACAP1Q9BZK3 213 aa18.53■□□□□ 0.56
PRKN-203ENST00000366894 HERC5Q9UII4 1024 aaKnown RBP18.53■□□□□ 0.56
PRKN-203ENST00000366894 GTF2A2P52657 109 aa18.52■□□□□ 0.56
PRKN-203ENST00000366894 PPATQ06203 517 aa18.52■□□□□ 0.56
PRKN-203ENST00000366894 RRP1BQ14684 758 aaKnown RBP18.52■□□□□ 0.56
PRKN-203ENST00000366894 GIMAP6Q6P9H5 292 aa18.52■□□□□ 0.56
PRKN-203ENST00000366894 HELLSQ9NRZ9 838 aa18.52■□□□□ 0.56
PRKN-203ENST00000366894 TRIM17Q9Y577 477 aa18.52■□□□□ 0.56
PRKN-203ENST00000366894 CCL15-CCL14A0A0B4J2E2 113 aa18.51■□□□□ 0.55
PRKN-203ENST00000366894 CCL15Q16663 113 aa18.51■□□□□ 0.55
PRKN-203ENST00000366894 SCYL3Q8IZE3 742 aa18.51■□□□□ 0.55
PRKN-203ENST00000366894 CRACR2BQ8N4Y2 399 aaPredicted RBP18.51■□□□□ 0.55
PRKN-203ENST00000366894 RUFY2Q8WXA3 655 aa18.51■□□□□ 0.55
PRKN-203ENST00000366894 MKI67P46013 3256 aaKnown RBP18.5■□□□□ 0.55
PRKN-203ENST00000366894 POLR3DP05423 398 aaPredicted RBP18.5■□□□□ 0.55
PRKN-203ENST00000366894 METTL16Q86W50 562 aaKnown RBP18.5■□□□□ 0.55
PRKN-203ENST00000366894 DNAJC18Q9H819 358 aa18.5■□□□□ 0.55
PRKN-203ENST00000366894 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRKN-203ENST00000366894 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.5■□□□□ 0.55
PRKN-203ENST00000366894 SAP30BPQ9UHR5 308 aaKnown RBP18.5■□□□□ 0.55
PRKN-203ENST00000366894 PALD1Q9ULE6 856 aa18.5■□□□□ 0.55
PRKN-203ENST00000366894 KCNH4Q9UQ05 1017 aa18.5■□□□□ 0.55
PRKN-203ENST00000366894 DOCK1Q14185 1865 aa18.5■□□□□ 0.55
PRKN-203ENST00000366894 CTNND1O60716 968 aaKnown RBP18.49■□□□□ 0.55
PRKN-203ENST00000366894 MBD4O95243 580 aa18.49■□□□□ 0.55
PRKN-203ENST00000366894 APPP05067 770 aa18.49■□□□□ 0.55
PRKN-203ENST00000366894 PTPRAP18433 802 aa18.49■□□□□ 0.55
PRKN-203ENST00000366894 MOGSQ13724 837 aa18.49■□□□□ 0.55
PRKN-203ENST00000366894 MCMDC2Q4G0Z9 681 aa18.49■□□□□ 0.55
PRKN-203ENST00000366894 TTC22Q5TAA0 569 aa18.49■□□□□ 0.55
PRKN-203ENST00000366894 OTOP1Q7RTM1 612 aa18.49■□□□□ 0.55
PRKN-203ENST00000366894 FAM43AQ8N2R8 423 aa18.49■□□□□ 0.55
PRKN-203ENST00000366894 ZNF287Q9HBT7 754 aa18.49■□□□□ 0.55
PRKN-203ENST00000366894 DIAPH3Q9NSV4 1193 aa18.49■□□□□ 0.55
PRKN-203ENST00000366894 GINM1Q9NU53 330 aa18.49■□□□□ 0.55
PRKN-203ENST00000366894 SLC4A4Q9Y6R1 1079 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms