RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ADD2P35612 726 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 ZNF589Q86UQ0 364 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 NAP1L4Q99733 375 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 BAG1Q99933 345 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 ATP6V1AP38606 617 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 TRAF1Q13077 416 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 TRIM28Q13263 835 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 SLC39A14Q15043 492 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 FMNL3Q8IVF7 1028 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 DIS3L2Q8IYB7 885 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 IFNL3Q8IZI9 196 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 SPATA5Q8NB90 893 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 ZNF532Q9HCE3 1301 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 ARHGAP23Q9P227 1491 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 PSMA7O14818 248 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 IL6STP40189 918 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 RPAINQ86UA6 219 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 IQCDQ96DY2 449 aa6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 SEC62Q99442 399 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-204ENST00000366767 SPATA31A3Q5VYP0 1347 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 DMTNQ08495 405 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 KLHL10Q6JEL2 608 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 TTLL7Q6ZT98 887 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 LINC00301Q8NCQ3 95 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 BICDL2A1A5D9 508 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 N4BP3O15049 544 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 C6orf163Q5TEZ5 329 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 DNAJC10Q8IXB1 793 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 BPIFA3Q9BQP9 254 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 CCDC160A6NGH7 325 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 AKR1B15C9JRZ8 316 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 CCDC6Q16204 474 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 GOLGA1Q92805 767 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 FOXP1Q9H334 677 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 TTF2Q9UNY4 1162 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 CARMIL3Q8ND23 1372 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 SEMA3EO15041 775 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 LRRC24Q50LG9 513 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 ISM2Q6H9L7 571 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 CCDC82Q8N4S0 544 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 NCOA5Q9HCD5 579 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 PCDHA7Q9UN72 937 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 CEP170BQ9Y4F5 1589 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 TMEM94Q12767 1356 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 RCAN1P53805 252 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 AP1ARQ63HQ0 302 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 SYT10Q6XYQ8 523 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 MAATS1Q7Z4T9 603 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 NUP58Q9BVL2 599 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 GOPCQ9HD26 462 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 AK9Q5TCS8 1911 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 CDHR2Q9BYE9 1310 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 KRT18P05783 430 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 HOXA7P31268 230 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 STAT6P42226 847 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 PAFAH1B1P43034 410 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 RRAGBQ5VZM2 374 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 DTHD1Q6ZMT9 781 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 CFAP57Q96MR6 1250 aa6.05□□□□□ -1.44
CDC42BPA-204ENST00000366767 U2AF2P26368 475 aaKnown RBP eCLIP6.04□□□□□ -1.442e-6■■■□□ 19
CDC42BPA-204ENST00000366767 PLCD1P51178 756 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 POSTNQ15063 836 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 DHX58Q96C10 678 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 SETDB2Q96T68 719 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 TANGO6Q9C0B7 1094 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 C6orf50Q9HD87 102 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 TCEAL9Q9UHQ7 104 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 STK36Q9NRP7 1315 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 COL15A1P39059 1388 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 PFKFB1P16118 471 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 PLCG2P16885 1265 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 UTP14CQ5TAP6 766 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 TPTE2Q6XPS3 522 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 PLA2G4DQ86XP0 818 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 RNF168Q8IYW5 571 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 CABP5Q9NP86 173 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 CTAGE15A4D2H0 777 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 ATP8B1O43520 1251 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 CTAGE8P0CG41 777 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 CTAGE6Q86UF2 777 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 CTAGE4Q8IX94 777 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 NSRP1Q9H0G5 558 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 BCL2L12Q9HB09 334 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 SPTLC3Q9NUV7 552 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 IQSEC3Q9UPP2 1182 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 OPA1O60313 960 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 LIFRP42702 1097 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 POTEDQ86YR6 584 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 CCDC114Q96M63 670 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 CCDC87Q9NVE4 849 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 SIGLEC1Q9BZZ2 1709 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 STAMBPO95630 424 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 GNA11P29992 359 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 LZTS2Q9BRK4 669 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 ISCA1Q9BUE6 129 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 ARMT1Q9H993 441 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 PRAMEF22A3QJZ6 481 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 FMNL1O95466 1100 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 MTIF2P46199 727 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 GALNT17Q6IS24 598 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms