RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 CTNND1O60716 968 aaKnown RBP12.59□□□□□ -0.39
YBX3-203ENST00000366286 PDE6AP16499 860 aa12.59□□□□□ -0.39
YBX3-203ENST00000366286 TMED8Q6PL24 325 aaPredicted RBP12.59□□□□□ -0.39
YBX3-203ENST00000366286 CERS3Q8IU89 383 aa12.59□□□□□ -0.39
YBX3-203ENST00000366286 CRBNQ96SW2 442 aa12.59□□□□□ -0.39
YBX3-203ENST00000366286 DHX36Q9H2U1 1008 aaKnown RBP12.59□□□□□ -0.39
YBX3-203ENST00000366286 BOLA2Q9H3K6 86 aa12.59□□□□□ -0.39
YBX3-203ENST00000366286 DCTPP1Q9H773 170 aa12.59□□□□□ -0.39
YBX3-203ENST00000366286 ZFYVE28Q9HCC9 887 aa12.59□□□□□ -0.39
YBX3-203ENST00000366286 ZCCHC17Q9NP64 241 aaKnown RBP12.59□□□□□ -0.39
YBX3-203ENST00000366286 PAG1Q9NWQ8 432 aa12.59□□□□□ -0.39
YBX3-203ENST00000366286 SAP30BPQ9UHR5 308 aaKnown RBP12.59□□□□□ -0.39
YBX3-203ENST00000366286 HERC5Q9UII4 1024 aaKnown RBP12.59□□□□□ -0.39
YBX3-203ENST00000366286 PCDHB15Q9Y5E8 787 aa12.59□□□□□ -0.39
YBX3-203ENST00000366286 RBBP6Q7Z6E9 1792 aaKnown RBP12.58□□□□□ -0.39
YBX3-203ENST00000366286 ATP5JP18859 108 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 MOGSQ13724 837 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 SLC4A8Q2Y0W8 1093 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 CCDC84Q86UT8 332 aaPredicted RBP12.58□□□□□ -0.4
YBX3-203ENST00000366286 CD99L2Q8TCZ2 262 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 ERO1AQ96HE7 468 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 HAUS7Q99871 368 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 RIOK1Q9BRS2 568 aaKnown RBP12.58□□□□□ -0.4
YBX3-203ENST00000366286 DNAJC18Q9H819 358 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 PI4KBQ9UBF8 816 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 PALD1Q9ULE6 856 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 ZHX2Q9Y6X8 837 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 HTTP42858 3142 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 ZNF532Q9HCE3 1301 aa12.58□□□□□ -0.4
YBX3-203ENST00000366286 A0A0G2JLL6 359 aaPredicted RBP12.57□□□□□ -0.4
YBX3-203ENST00000366286 MAGEB6P1A0A0J9YX57 407 aa12.57□□□□□ -0.4
YBX3-203ENST00000366286 TCRBV5S4A2TA0A5A2 114 aa12.57□□□□□ -0.4
YBX3-203ENST00000366286 CXCL11O14625 94 aa12.57□□□□□ -0.4
YBX3-203ENST00000366286 USP5P45974 858 aa12.57□□□□□ -0.4
YBX3-203ENST00000366286 CAP1Q01518 475 aa12.57□□□□□ -0.4
YBX3-203ENST00000366286 SP3Q02447 781 aa12.57□□□□□ -0.4
YBX3-203ENST00000366286 RRP1BQ14684 758 aaKnown RBP12.57□□□□□ -0.4
YBX3-203ENST00000366286 PKN2Q16513 984 aaKnown RBP12.57□□□□□ -0.4
YBX3-203ENST00000366286 SLC9C2Q5TAH2 1124 aa12.57□□□□□ -0.4
YBX3-203ENST00000366286 PRRT2Q7Z6L0 340 aaPredicted RBP12.57□□□□□ -0.4
YBX3-203ENST00000366286 ANKRD23Q86SG2 305 aa12.57□□□□□ -0.4
YBX3-203ENST00000366286 AFG3L2Q9Y4W6 797 aa12.57□□□□□ -0.4
YBX3-203ENST00000366286 TRIM75PA6NK02 468 aa12.56□□□□□ -0.4
YBX3-203ENST00000366286 PDHXO00330 501 aa12.56□□□□□ -0.4
YBX3-203ENST00000366286 TLR2O60603 784 aa12.56□□□□□ -0.4
YBX3-203ENST00000366286 HLA-DOAP06340 250 aa12.56□□□□□ -0.4
YBX3-203ENST00000366286 CAP2P40123 477 aa12.56□□□□□ -0.4
YBX3-203ENST00000366286 FBXO46Q6PJ61 603 aaPredicted RBP12.56□□□□□ -0.4
YBX3-203ENST00000366286 OTOP1Q7RTM1 612 aa12.56□□□□□ -0.4
YBX3-203ENST00000366286 CRACR2BQ8N4Y2 399 aaPredicted RBP12.56□□□□□ -0.4
YBX3-203ENST00000366286 HPS5Q9UPZ3 1129 aa12.56□□□□□ -0.4
YBX3-203ENST00000366286 TRIM17Q9Y577 477 aa12.56□□□□□ -0.4
YBX3-203ENST00000366286 ADGRA2Q96PE1 1338 aa12.56□□□□□ -0.4
YBX3-203ENST00000366286 ADD2P35612 726 aa12.55□□□□□ -0.4
YBX3-203ENST00000366286 SHROOM1Q2M3G4 852 aaPredicted RBP12.55□□□□□ -0.4
YBX3-203ENST00000366286 SLFNL1Q499Z3 407 aa12.55□□□□□ -0.4
YBX3-203ENST00000366286 TSHZ3Q63HK5 1081 aa12.55□□□□□ -0.4
YBX3-203ENST00000366286 GPAT2Q6NUI2 795 aa12.55□□□□□ -0.4
YBX3-203ENST00000366286 GADL1Q6ZQY3 521 aa12.55□□□□□ -0.4
YBX3-203ENST00000366286 METTL16Q86W50 562 aaKnown RBP12.55□□□□□ -0.4
YBX3-203ENST00000366286 LCORLQ8N3X6 602 aa12.55□□□□□ -0.4
YBX3-203ENST00000366286 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
YBX3-203ENST00000366286 ECHDC1Q9NTX5 307 aa12.55□□□□□ -0.4
YBX3-203ENST00000366286 GDF11O95390 407 aa12.54□□□□□ -0.4
YBX3-203ENST00000366286 CHGBP05060 677 aa12.54□□□□□ -0.4
YBX3-203ENST00000366286 FASTKD5Q7L8L6 764 aaKnown RBP12.54□□□□□ -0.4
YBX3-203ENST00000366286 GPATCH3Q96I76 525 aa12.54□□□□□ -0.4
YBX3-203ENST00000366286 PARK7Q99497 189 aaKnown RBP12.54□□□□□ -0.4
YBX3-203ENST00000366286 CRNKL1Q9BZJ0 848 aaKnown RBP12.54□□□□□ -0.4
YBX3-203ENST00000366286 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.54□□□□□ -0.4
YBX3-203ENST00000366286 USP17L5A8MUK1 530 aa12.53□□□□□ -0.4
YBX3-203ENST00000366286 MBD4O95243 580 aa12.53□□□□□ -0.4
YBX3-203ENST00000366286 JAG1P78504 1218 aa12.53□□□□□ -0.4
YBX3-203ENST00000366286 FOXP4Q8IVH2 680 aaPredicted RBP12.53□□□□□ -0.4
YBX3-203ENST00000366286 ZNF280CQ8ND82 737 aa12.53□□□□□ -0.4
YBX3-203ENST00000366286 SDR42E1Q8WUS8 393 aa12.53□□□□□ -0.4
YBX3-203ENST00000366286 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
YBX3-203ENST00000366286 ARHGAP39Q9C0H5 1083 aa12.53□□□□□ -0.4
YBX3-203ENST00000366286 EHD4Q9H223 541 aa12.53□□□□□ -0.4
YBX3-203ENST00000366286 ARMT1Q9H993 441 aa12.53□□□□□ -0.4
YBX3-203ENST00000366286 EFCC1Q9HA90 598 aa12.53□□□□□ -0.4
YBX3-203ENST00000366286 CPA4Q9UI42 421 aa12.53□□□□□ -0.4
YBX3-203ENST00000366286 ASNSP08243 561 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 CYP2C8P10632 490 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 HMGCS2P54868 508 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 SOX10P56693 466 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 LACTBP83111 547 aaPredicted RBP12.52□□□□□ -0.41
YBX3-203ENST00000366286 SPP2Q13103 211 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 TREML2Q5T2D2 321 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 C17orf99Q6UX52 265 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 PROCA1Q8NCQ7 364 aaPredicted RBP12.52□□□□□ -0.41
YBX3-203ENST00000366286 OTUD7AQ8TE49 926 aaPredicted RBP12.52□□□□□ -0.41
YBX3-203ENST00000366286 AS3MTQ9HBK9 375 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 SERPINB13Q9UIV8 391 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 ZBTB21Q9ULJ3 1066 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 AGTPBP1Q9UPW5 1226 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 PTPN22Q9Y2R2 807 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 SLC45A1Q9Y2W3 748 aa12.52□□□□□ -0.41
YBX3-203ENST00000366286 CENPFP49454 3210 aa12.51□□□□□ -0.41
YBX3-203ENST00000366286 PLCD1P51178 756 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms