RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 NANOS3P60323 173 aaKnown RBP1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 CAP1Q01518 475 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 KLF10Q13118 480 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 IRF5Q13568 498 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 SNX17Q15036 470 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 VMACQ2NL98 169 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 USP17L2Q6R6M4 530 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 TMPRSS7Q7RTY8 843 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 USP17L1Q7RTZ2 530 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 ZNF438Q7Z4V0 828 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 SCUBE1Q8IWY4 988 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 DNAJC10Q8IXB1 793 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 DEPDC4Q8N2C3 294 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 NLGN1Q8N2Q7 840 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 PDZD8Q8NEN9 1154 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 PANK1Q8TE04 598 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 VOPP1Q96AW1 172 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 HEXIM2Q96MH2 286 aaKnown RBP1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 HSPA12BQ96MM6 686 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 CRAMP1Q96RY5 1269 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 WDR18Q9BV38 432 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 BRIP1Q9BX63 1249 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 KRTAP3-1Q9BYR8 98 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 BHLHE41Q9C0J9 482 aaPredicted RBP1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 KDM4CQ9H3R0 1056 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 MBD1Q9UIS9 605 aaPredicted RBP1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 SALL4Q9UJQ4 1053 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 YBX2Q9Y2T7 364 aaKnown RBP1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 TSC22D4Q9Y3Q8 395 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 HS3ST3A1Q9Y663 406 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 H3BS24 57 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 IRS4O14654 1257 aaPredicted RBP1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 EDN3P14138 238 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 SRSF3P84103 164 aaKnown RBP1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 PCDH1Q08174 1060 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 AP3B2Q13367 1082 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 FHL2Q14192 279 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 DPY19L2P1Q6NXN4 242 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 C22orf34Q6ZV56 151 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 SPRED1Q7Z699 444 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 PHF6Q8IWS0 365 aaKnown RBP eCLIP1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 MFSD4AQ8N468 514 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 DHX38Q92620 1227 aaKnown RBP1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 NXPE3Q969Y0 559 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 PWWP2AQ96N64 755 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 FANCD2OSQ96PS1 177 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 OSMRQ99650 979 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZNF747Q9BV97 191 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 PRDM10Q9NQV6 1147 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 DLL4Q9NR61 685 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 PPP1R9AQ9ULJ8 1098 aa1.21□□□□□ -2.22
RNU6-54P-201ENST00000365563 DNAJC25-GNG10A0A024R161 153 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 ABLIM1O14639 778 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 HCLS1P14317 486 aaPredicted RBP1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 ACPPP15309 386 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 CNR2P34972 360 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 ABL2P42684 1182 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 EPHB3P54753 998 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 SLURP1P55000 103 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 GJA9P57773 515 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 ERVFC1P60507 584 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 CHRNEQ04844 493 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 TTLL4Q14679 1199 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 NR0B2Q15466 257 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 TIGD5Q53EQ6 642 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 RALGPS1Q5JS13 557 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 NT5DC1Q5TFE4 455 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 CDKAL1Q5VV42 579 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZNF746Q6NUN9 644 aaPredicted RBP1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 FERMT3Q86UX7 667 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 FAM129CQ86XR2 697 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 SPPL2CQ8IUH8 684 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 WWC1Q8IX03 1113 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 TTC16Q8NEE8 873 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 CHFRQ96EP1 664 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZKSCAN3Q9BRR0 538 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 DNAJC25Q9H1X3 360 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 CLEC4MQ9H2X3 399 aaPredicted RBP1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 ELP3Q9H9T3 547 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 SLC24A3Q9HC58 644 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 SNRKQ9NRH2 765 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 GPR160Q9UJ42 338 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 PCSK5Q92824 1860 aa1.2□□□□□ -2.22
RNU6-54P-201ENST00000365563 CTSBP07858 339 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 PCSK2P16519 638 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 TRHRP34981 398 aaPredicted RBP1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZAP70P43403 619 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 KRTAP10-11P60412 298 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 ABHD18Q0P651 414 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 TMEM62Q0P6H9 643 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 DUSP4Q13115 394 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 SFRP5Q5T4F7 317 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 ADGRF1Q5T601 910 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 FAM214BQ7L5A3 538 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 ETFBKMTQ8IXQ9 262 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 ABTB2Q8N961 1025 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 MZB1Q8WU39 189 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 COX4I2Q96KJ9 171 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 CEP89Q96ST8 783 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 EPB41L4AQ9HCS5 686 aaPredicted RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms