RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 CCNT1O60563 726 aaKnown RBP12.23□□□□□ -0.45
CLIP1-203ENST00000361654 TUBB4BP68371 445 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 MAPK8IP2Q13387 824 aaPredicted RBP12.23□□□□□ -0.45
CLIP1-203ENST00000361654 SUPT20HL1Q3ZLR7 823 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 UTP14CQ5TAP6 766 aaKnown RBP12.23□□□□□ -0.45
CLIP1-203ENST00000361654 ARMC9Q7Z3E5 817 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 SRGAP1Q7Z6B7 1085 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 ABI1Q8IZP0 508 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 TBC1D32Q96NH3 1257 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 PLIN2Q99541 437 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 H0YCG3 227 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 OSBPP22059 807 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 YARSP54577 528 aaKnown RBP12.23□□□□□ -0.45
CLIP1-203ENST00000361654 ZNF174Q15697 407 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 MFSD14BQ5SR56 506 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 ARHGEF16Q5VV41 709 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 ANKRD35Q8N283 1001 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 PCF11O94913 1555 aaKnown RBP12.23□□□□□ -0.45
CLIP1-203ENST00000361654 KCTD2Q14681 263 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 PPP1R21Q6ZMI0 780 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 MAPKAPK5Q8IW41 473 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 TSGA10Q9BZW7 698 aa12.23□□□□□ -0.45
CLIP1-203ENST00000361654 NUP160Q12769 1436 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 OATP04181 439 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 USH1GQ495M9 461 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 DPP9Q86TI2 863 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 AP5M1Q9H0R1 490 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 MRPL11Q9Y3B7 192 aaKnown RBP12.22□□□□□ -0.45
CLIP1-203ENST00000361654 SBNO1A3KN83 1393 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 DISP3Q9P2K9 1392 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 PDE4DQ08499 809 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
CLIP1-203ENST00000361654 GTF3C6Q969F1 213 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 FAM184BQ9ULE4 1060 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 TXKP42681 527 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 DCUN1D2Q6PH85 259 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 FNBP4Q8N3X1 1017 aaPredicted RBP12.22□□□□□ -0.45
CLIP1-203ENST00000361654 METTL13Q8N6R0 699 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 CTAGE9A4FU28 777 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 CCDC129Q6ZRS4 1044 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 TTLL7Q6ZT98 887 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 LRWD1Q9UFC0 647 aa12.22□□□□□ -0.45
CLIP1-203ENST00000361654 B4E1Z4 1266 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 ANO3Q9BYT9 981 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.45
CLIP1-203ENST00000361654 HSP90AA4PQ58FG1 418 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 TMC4Q7Z404 712 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 NCAPG2Q86XI2 1143 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 TGFBRAP1Q8WUH2 860 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 ARPP21Q9UBL0 812 aaPredicted RBP12.21□□□□□ -0.45
CLIP1-203ENST00000361654 PAXBP1Q9Y5B6 917 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 F13A1P00488 732 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 ERCC6LQ2NKX8 1250 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 TNNI3KQ59H18 835 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 MUM1L1Q5H9M0 696 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 ZSWIM4Q9H7M6 989 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 FPGT-TNNI3KV9GXZ4 949 aa12.21□□□□□ -0.45
CLIP1-203ENST00000361654 V9GY48 417 aaPredicted RBP12.21□□□□□ -0.45
CLIP1-203ENST00000361654 ERICH4A6NGS2 130 aa12.21□□□□□ -0.46
CLIP1-203ENST00000361654 EXOC3O60645 756 aa12.21□□□□□ -0.46
CLIP1-203ENST00000361654 A1BGP04217 495 aa12.21□□□□□ -0.46
CLIP1-203ENST00000361654 TIMM10P62072 90 aa12.21□□□□□ -0.46
CLIP1-203ENST00000361654 MYCT1Q8N699 235 aa12.21□□□□□ -0.46
CLIP1-203ENST00000361654 ABT1Q9ULW3 272 aaKnown RBP12.21□□□□□ -0.46
CLIP1-203ENST00000361654 GPATCH8Q9UKJ3 1502 aaKnown RBP12.21□□□□□ -0.46
CLIP1-203ENST00000361654 PIK3AP1Q6ZUJ8 805 aa12.21□□□□□ -0.46
CLIP1-203ENST00000361654 MIER3Q7Z3K6 550 aa12.21□□□□□ -0.46
CLIP1-203ENST00000361654 AOPEPQ8N6M6 819 aa12.21□□□□□ -0.46
CLIP1-203ENST00000361654 SPATA5Q8NB90 893 aa12.21□□□□□ -0.46
CLIP1-203ENST00000361654 SNX29Q8TEQ0 813 aa12.21□□□□□ -0.46
CLIP1-203ENST00000361654 NOC4LQ9BVI4 516 aaKnown RBP12.21□□□□□ -0.46
CLIP1-203ENST00000361654 LRFN2Q9ULH4 789 aa12.21□□□□□ -0.46
CLIP1-203ENST00000361654 RXRAP19793 462 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 STX17P56962 302 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 CCDC26Q8TAB7 109 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 TAF5LO75529 589 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 ANO6Q4KMQ2 910 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 TAOK1Q7L7X3 1001 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 MED10Q9BTT4 135 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 ATP8A2Q9NTI2 1148 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 GOLGA6CA6NDK9 693 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 GOLGA6BA6NDN3 693 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 HMGB1P1B2RPK0 211 aaPredicted RBP12.2□□□□□ -0.46
CLIP1-203ENST00000361654 XPOTO43592 962 aaKnown RBP12.2□□□□□ -0.46
CLIP1-203ENST00000361654 GAS7O60861 476 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 GOLGA6DP0CG33 693 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 ALAS1P13196 640 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 ITIH3Q06033 890 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 ZNF365Q70YC5 407 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 CNGA4Q8IV77 575 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 ANKS4BQ8N8V4 417 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 NRBP2Q9NSY0 501 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 GOLGA6AQ9NYA3 693 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 DACT1Q9NYF0 836 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 ANGEL1Q9UNK9 670 aaKnown RBP12.2□□□□□ -0.46
CLIP1-203ENST00000361654 ASXL1Q8IXJ9 1541 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 HSPA4P34932 840 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 PLCB4Q15147 1175 aa12.2□□□□□ -0.46
CLIP1-203ENST00000361654 UBL4BQ8N7F7 174 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms