RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 NSUN4Q96CB9 384 aaKnown RBP26.07■■□□□ 1.76
CD47-202ENST00000361309 OSBPL5Q9H0X9 879 aaPredicted RBP26.07■■□□□ 1.76
CD47-202ENST00000361309 LDHCP07864 332 aa26.06■■□□□ 1.76
CD47-202ENST00000361309 GORABQ5T7V8 394 aa26.06■■□□□ 1.76
CD47-202ENST00000361309 PNMA3Q9UL41 463 aa26.06■■□□□ 1.76
CD47-202ENST00000361309 TAOK2Q9UL54 1235 aa26.06■■□□□ 1.76
CD47-202ENST00000361309 CDK5RAP2Q96SN8 1893 aa26.06■■□□□ 1.76
CD47-202ENST00000361309 ALPK3Q96L96 1907 aa26.06■■□□□ 1.76
CD47-202ENST00000361309 MYO5AQ9Y4I1 1855 aaKnown RBP26.05■■□□□ 1.76
CD47-202ENST00000361309 SPP2Q13103 211 aa26.05■■□□□ 1.76
CD47-202ENST00000361309 PROCA1Q8NCQ7 364 aaPredicted RBP26.05■■□□□ 1.76
CD47-202ENST00000361309 COA7Q96BR5 231 aa26.05■■□□□ 1.76
CD47-202ENST00000361309 RAI14Q9P0K7 980 aa26.05■■□□□ 1.76
CD47-202ENST00000361309 NR2E3Q9Y5X4 410 aa26.05■■□□□ 1.76
CD47-202ENST00000361309 SIPA1L1O43166 1804 aa26.04■■□□□ 1.76
CD47-202ENST00000361309 COL2A1P02458 1487 aaPredicted RBP26.04■■□□□ 1.76
CD47-202ENST00000361309 MAP4K4O95819 1239 aaPredicted RBP26.04■■□□□ 1.76
CD47-202ENST00000361309 TFRCP02786 760 aaKnown RBP26.04■■□□□ 1.76
CD47-202ENST00000361309 ARID4AP29374 1257 aaPredicted RBP26.04■■□□□ 1.76
CD47-202ENST00000361309 FAM110CQ1W6H9 321 aa26.04■■□□□ 1.76
CD47-202ENST00000361309 DEFB118Q96PH6 123 aa26.04■■□□□ 1.76
CD47-202ENST00000361309 ZNF280CQ8ND82 737 aa26.03■■□□□ 1.76
CD47-202ENST00000361309 ZBTB7BO15156 539 aaPredicted RBP26.02■■□□□ 1.76
CD47-202ENST00000361309 MCAMP43121 646 aa26.02■■□□□ 1.76
CD47-202ENST00000361309 HMGCS2P54868 508 aa26.02■■□□□ 1.76
CD47-202ENST00000361309 RRP1BQ14684 758 aaKnown RBP26.02■■□□□ 1.76
CD47-202ENST00000361309 TEX11Q8IYF3 940 aa26.02■■□□□ 1.76
CD47-202ENST00000361309 PAK6Q9NQU5 681 aaPredicted RBP26.02■■□□□ 1.76
CD47-202ENST00000361309 FOCADQ5VW36 1801 aa26.02■■□□□ 1.76
CD47-202ENST00000361309 PLXNB2O15031 1838 aa26.01■■□□□ 1.75
CD47-202ENST00000361309 GNAI2P04899 355 aa26.01■■□□□ 1.75
CD47-202ENST00000361309 CAP2P40123 477 aa26.01■■□□□ 1.75
CD47-202ENST00000361309 G3BP1Q13283 466 aaKnown RBP eCLIP26.01■■□□□ 1.75
CD47-202ENST00000361309 PRO3102Q9H379 93 aa26.01■■□□□ 1.75
CD47-202ENST00000361309 TNNQ9UQP3 1299 aa26.01■■□□□ 1.75
CD47-202ENST00000361309 MAST2Q6P0Q8 1798 aa26■■□□□ 1.75
CD47-202ENST00000361309 PNMA6EA0A0J9YXQ4 647 aa26■■□□□ 1.75
CD47-202ENST00000361309 SH3RF3Q8TEJ3 882 aaPredicted RBP26■■□□□ 1.75
CD47-202ENST00000361309 TBC1D2Q9BYX2 928 aa26■■□□□ 1.75
CD47-202ENST00000361309 LRP2BPQ9P2M1 347 aa26■■□□□ 1.75
CD47-202ENST00000361309 USP17L5A8MUK1 530 aa25.99■■□□□ 1.75
CD47-202ENST00000361309 TRIM27P14373 513 aa25.99■■□□□ 1.75
CD47-202ENST00000361309 CAPN2P17655 700 aa25.99■■□□□ 1.75
CD47-202ENST00000361309 GCLCP48506 637 aaPredicted RBP25.99■■□□□ 1.75
CD47-202ENST00000361309 PABPC4Q13310 644 aaKnown RBP eCLIP25.99■■□□□ 1.75
CD47-202ENST00000361309 ASCC2Q9H1I8 757 aaPredicted RBP25.99■■□□□ 1.75
CD47-202ENST00000361309 IPO8O15397 1037 aaKnown RBP25.98■■□□□ 1.75
CD47-202ENST00000361309 EVI5O60447 810 aa25.98■■□□□ 1.75
CD47-202ENST00000361309 UQCRFS1P1P0C7P4 283 aa25.98■■□□□ 1.75
CD47-202ENST00000361309 NOL10Q9BSC4 688 aaKnown RBP25.98■■□□□ 1.75
CD47-202ENST00000361309 CRISPLD2Q9H0B8 497 aa25.98■■□□□ 1.75
CD47-202ENST00000361309 HERC5Q9UII4 1024 aaKnown RBP25.98■■□□□ 1.75
CD47-202ENST00000361309 SH3D19Q5HYK7 790 aa25.97■■□□□ 1.75
CD47-202ENST00000361309 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.97■■□□□ 1.75
CD47-202ENST00000361309 AS3MTQ9HBK9 375 aa25.97■■□□□ 1.75
CD47-202ENST00000361309 PI4KBQ9UBF8 816 aa25.97■■□□□ 1.75
CD47-202ENST00000361309 ATF7IPQ6VMQ6 1270 aa25.96■■□□□ 1.75
CD47-202ENST00000361309 FRAT1Q92837 279 aaPredicted RBP25.96■■□□□ 1.75
CD47-202ENST00000361309 PAWRQ96IZ0 340 aaKnown RBP25.96■■□□□ 1.75
CD47-202ENST00000361309 SNRKQ9NRH2 765 aa25.96■■□□□ 1.75
CD47-202ENST00000361309 AATFQ9NY61 560 aaKnown RBP eCLIP25.96■■□□□ 1.75
CD47-202ENST00000361309 NAA16Q6N069 864 aaPredicted RBP25.95■■□□□ 1.74
CD47-202ENST00000361309 CLUAP1Q96AJ1 413 aa25.95■■□□□ 1.74
CD47-202ENST00000361309 GJD2Q9UKL4 321 aa25.95■■□□□ 1.74
CD47-202ENST00000361309 BCAR3O75815 825 aa25.94■■□□□ 1.74
CD47-202ENST00000361309 HMGCRP04035 888 aa25.94■■□□□ 1.74
CD47-202ENST00000361309 DIS3LQ8TF46 1054 aaKnown RBP25.94■■□□□ 1.74
CD47-202ENST00000361309 WDR18Q9BV38 432 aa25.94■■□□□ 1.74
CD47-202ENST00000361309 DHX36Q9H2U1 1008 aaKnown RBP25.94■■□□□ 1.74
CD47-202ENST00000361309 MYH1P12882 1939 aa25.93■■□□□ 1.74
CD47-202ENST00000361309 BAG3O95817 575 aa25.93■■□□□ 1.74
CD47-202ENST00000361309 MTMR2Q13614 643 aa25.93■■□□□ 1.74
CD47-202ENST00000361309 TTC39AQ5SRH9 613 aa25.93■■□□□ 1.74
CD47-202ENST00000361309 NECAB2Q7Z6G3 386 aa25.93■■□□□ 1.74
CD47-202ENST00000361309 TGFBRAP1Q8WUH2 860 aa25.93■■□□□ 1.74
CD47-202ENST00000361309 DDX60LQ5H9U9 1706 aaKnown RBP25.92■■□□□ 1.74
CD47-202ENST00000361309 PLCG2P16885 1265 aa25.92■■□□□ 1.74
CD47-202ENST00000361309 IRX3P78415 501 aaPredicted RBP25.92■■□□□ 1.74
CD47-202ENST00000361309 JAG1P78504 1218 aa25.92■■□□□ 1.74
CD47-202ENST00000361309 TRIM32Q13049 653 aa25.92■■□□□ 1.74
CD47-202ENST00000361309 MAPKAPK5Q8IW41 473 aa25.92■■□□□ 1.74
CD47-202ENST00000361309 ASNSP08243 561 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 BACE1P56817 501 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 PPP4CP60510 307 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 TNNI3KQ59H18 835 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 ADGRA1Q86SQ6 560 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 DBNDD2Q9BQY9 259 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 DNAJC18Q9H819 358 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 HMX1Q9NP08 348 aaPredicted RBP25.91■■□□□ 1.74
CD47-202ENST00000361309 GPR108Q9NPR9 543 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 TMOD4Q9NZQ9 345 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 MORF4L1Q9UBU8 362 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 STAP2Q9UGK3 403 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 FPGT-TNNI3KV9GXZ4 949 aa25.91■■□□□ 1.74
CD47-202ENST00000361309 FLT1P17948 1338 aa25.9■■□□□ 1.74
CD47-202ENST00000361309 RPTORQ8N122 1335 aa25.9■■□□□ 1.74
CD47-202ENST00000361309 LAMA3Q16787 3333 aa25.9■■□□□ 1.74
CD47-202ENST00000361309 CYP2E1P05181 493 aaPredicted RBP25.9■■□□□ 1.74
CD47-202ENST00000361309 SHROOM1Q2M3G4 852 aaPredicted RBP25.9■■□□□ 1.74
CD47-202ENST00000361309 CCDC158Q5M9N0 1113 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms