RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 ESYT2A0FGR8 921 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 DRC3Q9H069 523 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 SYNRGQ9UMZ2 1314 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 FRMD3A2A2Y4 597 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 STAG1Q8WVM7 1258 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 XRCC6P12956 609 aaKnown RBP eCLIP19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 BEND3Q5T5X7 828 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 FAM71BQ8TC56 605 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 ANLNQ9NQW6 1124 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 NCOA2Q15596 1464 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 HIP1RO75146 1068 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 DCLK2Q8N568 766 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 IQUBQ8NA54 791 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 MAN1A2O60476 641 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 ZBTB24O43167 697 aaPredicted RBP19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 KSR1Q8IVT5 923 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 HELBQ8NG08 1087 aaPredicted RBP19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 VPS16Q9H269 839 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 TRIM14Q14142 442 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 VPS37BQ9H9H4 285 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 RBM8AQ9Y5S9 174 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 CCDC141Q6ZP82 1450 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 LRGUKQ96M69 825 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 MAGEB6Q8N7X4 407 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 PIK3R4Q99570 1358 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 STX2P32856 288 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 ELP1O95163 1332 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 RAD51AP2Q09MP3 1159 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 KLHL7Q8IXQ5 586 aa19.16■□□□□ 0.66
CACNA1A-201ENST00000360228 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 SCINQ9Y6U3 715 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 TBC1D32Q96NH3 1257 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 PHBP35232 272 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 TBC1D8BQ0IIM8 1120 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 HP1BP3Q5SSJ5 553 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 SPOUT1Q5T280 376 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 RASIP1Q5U651 963 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 PALM2Q8IXS6 379 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 SYCE1Q8N0S2 351 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 EPS15L1Q9UBC2 864 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 NOP56O00567 594 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 PPP2R5AQ15172 486 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 TRIM60Q495X7 471 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 CCDC13Q8IYE1 715 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 NUDT16Q96DE0 195 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 SETDB2Q96T68 719 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 PALMDQ9NP74 551 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 C9orf84Q5VXU9 1444 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
CACNA1A-201ENST00000360228 RGS16O15492 202 aaPredicted RBP19.14■□□□□ 0.66
CACNA1A-201ENST00000360228 MTMR3Q13615 1198 aa19.14■□□□□ 0.66
CACNA1A-201ENST00000360228 MAEAQ7L5Y9 396 aa19.14■□□□□ 0.66
CACNA1A-201ENST00000360228 NUCKS1Q9H1E3 243 aaKnown RBP19.14■□□□□ 0.66
CACNA1A-201ENST00000360228 RAB3GAP1Q15042 981 aa19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 PPP4R4Q6NUP7 873 aa19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 ANKRD42Q8N9B4 389 aa19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 ERO1AQ96HE7 468 aa19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 MCM9Q9NXL9 1143 aa19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 LRPPRCP42704 1394 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 CFAP221Q4G0U5 840 aa19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 ARMC9Q7Z3E5 817 aa19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 ABCC11Q96J66 1382 aa19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 GFAPP14136 432 aa19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 KRT81Q14533 505 aa19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 MAPK8IP1Q9UQF2 711 aa19.14■□□□□ 0.65
CACNA1A-201ENST00000360228 SAT1P21673 171 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 CTAGE3PQ8IX95 158 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 RXRAP19793 462 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 DAAM1Q9Y4D1 1078 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 CAPN7Q9Y6W3 813 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 RNF40O75150 1001 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 PAK2Q13177 524 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 TSTA3Q13630 321 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 BZW2Q9Y6E2 419 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 ATXN8OSP0DMR3 200 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 P3H4Q92791 437 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 SECISBP2LQ93073 1101 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 SERPINI2O75830 405 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 SLC9C2Q5TAH2 1124 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 NRBF2Q96F24 287 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 RAB17Q9H0T7 212 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 GPHNQ9NQX3 736 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 KLHL14Q9P2G3 628 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 ELF2Q15723 593 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 MRFAP1L1Q96HT8 127 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 TTF2Q9UNY4 1162 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 PARP1P09874 1014 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 KRT71Q3SY84 523 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 ANO3Q9BYT9 981 aa19.13■□□□□ 0.65
CACNA1A-201ENST00000360228 KRT19P08727 400 aa19.12■□□□□ 0.65
CACNA1A-201ENST00000360228 SDSP20132 328 aa19.12■□□□□ 0.65
CACNA1A-201ENST00000360228 TMED1Q13445 227 aa19.12■□□□□ 0.65
CACNA1A-201ENST00000360228 BCRP11274 1271 aa19.12■□□□□ 0.65
CACNA1A-201ENST00000360228 PLEKHA4Q9H4M7 779 aa19.12■□□□□ 0.65
CACNA1A-201ENST00000360228 PAG1Q9NWQ8 432 aa19.12■□□□□ 0.65
CACNA1A-201ENST00000360228 PARP2Q9UGN5 583 aa19.12■□□□□ 0.65
CACNA1A-201ENST00000360228 ESRRGP62508 458 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms