RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 DCPSQ96C86 337 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 ZNF274Q96GC6 653 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 TMEM87BQ96K49 555 aa12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 ATP8A2Q9NTI2 1148 aa12.65□□□□□ -0.38
TRAPPC4-201ENST00000359005 ERICH2A1L162 156 aa12.64□□□□□ -0.39
TRAPPC4-201ENST00000359005 WNT10BO00744 389 aa12.64□□□□□ -0.39
TRAPPC4-201ENST00000359005 MCM4P33991 863 aa12.64□□□□□ -0.39
TRAPPC4-201ENST00000359005 HMGN5P82970 282 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-201ENST00000359005 CPLX2Q6PUV4 134 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-201ENST00000359005 SYNE3Q6ZMZ3 975 aa12.64□□□□□ -0.39
TRAPPC4-201ENST00000359005 KIAA0825Q8IV33 1275 aa12.64□□□□□ -0.39
TRAPPC4-201ENST00000359005 TNPO1Q92973 898 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-201ENST00000359005 CDCA5Q96FF9 252 aa12.64□□□□□ -0.39
TRAPPC4-201ENST00000359005 ZBED3Q96IU2 234 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-201ENST00000359005 IQSEC3Q9UPP2 1182 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-201ENST00000359005 FAM155AB1AL88 458 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 HSPA8P11142 646 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 LBX1P52954 281 aa12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 HUNKP57058 714 aa12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 EXOSC10Q01780 885 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 GRIK5Q16478 980 aa12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 NSUN4Q96CB9 384 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 AGXT2Q9BYV1 514 aa12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 ARMT1Q9H993 441 aa12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 ZNF287Q9HBT7 754 aa12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 GBA2Q9HCG7 927 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
TRAPPC4-201ENST00000359005 LAMA4Q16363 1823 aa12.62□□□□□ -0.39
TRAPPC4-201ENST00000359005 CDKL5O76039 1030 aa12.62□□□□□ -0.39
TRAPPC4-201ENST00000359005 NCLP19338 710 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-201ENST00000359005 MECOMQ03112 1051 aa12.62□□□□□ -0.39
TRAPPC4-201ENST00000359005 AKNAD1Q5T1N1 836 aa12.62□□□□□ -0.39
TRAPPC4-201ENST00000359005 CCDC83Q8IWF9 413 aa12.62□□□□□ -0.39
TRAPPC4-201ENST00000359005 SULF1Q8IWU6 871 aa12.62□□□□□ -0.39
TRAPPC4-201ENST00000359005 BRF1Q92994 677 aa12.62□□□□□ -0.39
TRAPPC4-201ENST00000359005 ARPP21Q9UBL0 812 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-201ENST00000359005 ANAPC4Q9UJX5 808 aa12.62□□□□□ -0.39
TRAPPC4-201ENST00000359005 GSG1L2A8MUP6 293 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 F8W031 263 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 PRC1O43663 620 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 PFKFB2O60825 505 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 CHGBP05060 677 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 CPA1P15085 419 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 TOB2Q14106 344 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 PPP2R5BQ15173 497 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 ME3Q16798 604 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 CCDC178Q5BJE1 867 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 TNS4Q8IZW8 715 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 LCORLQ8N3X6 602 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 MIGA1Q8NAN2 632 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 FAM184AQ8NB25 1140 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 RGS22Q8NE09 1264 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 STAG1Q8WVM7 1258 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 ESR2Q92731 530 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 GTF3C6Q969F1 213 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 HHIPL1Q96JK4 782 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 TPCN1Q9ULQ1 816 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 FAM205AQ6ZU69 1335 aa12.61□□□□□ -0.39
TRAPPC4-201ENST00000359005 STX6O43752 255 aa12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 BRD1O95696 1058 aa12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 GJB2P29033 226 aa12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 MAP2K2P36507 400 aa12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 ECE1P42892 770 aa12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 CTCFP49711 727 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 EVCP57679 992 aa12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 HAND2P61296 217 aa12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 PDE4BQ07343 736 aa12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 SLFNL1Q499Z3 407 aa12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 MB21D2Q8IYB1 491 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 PRMT6Q96LA8 375 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 NAP1L2Q9ULW6 460 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 ANGEL1Q9UNK9 670 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 FZD1Q9UP38 647 aa12.6□□□□□ -0.39
TRAPPC4-201ENST00000359005 CCDC196A0A1B0GTZ2 297 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 UBE2Q2LH0YL09 131 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 CPLX1O14810 134 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 LIFRP42702 1097 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 USP5P45974 858 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 RCAN1P53805 252 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 PPP4CP60510 307 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 MAP2K1Q02750 393 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 PPARAQ07869 468 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 RGMBQ6NW40 437 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 IQCA1Q86XH1 822 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 OGFOD1Q8N543 542 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 C2orf69Q8N8R5 385 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 RIOK1Q9BRS2 568 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 UBAC1Q9BSL1 405 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 PRDM10Q9NQV6 1147 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 TOMM22Q9NS69 142 aa12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 MYO5AQ9Y4I1 1855 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 COL1A1P02452 1464 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-201ENST00000359005 CCDC69A6NI79 296 aa12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 H3BQV1 296 aa12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 CAPN15O75808 1086 aa12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 ZSCAN22P10073 491 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 FKBP1AP62942 108 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms