RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 A0A1W2PQD8 194 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 PPARAQ07869 468 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 CCDC178Q5BJE1 867 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 SPTY2D1Q68D10 685 aaPredicted RBP13.92□□□□□ -0.18
COL20A1-201ENST00000358894 FANCLQ9NW38 375 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 ZNF215Q9UL58 517 aaPredicted RBP13.92□□□□□ -0.18
COL20A1-201ENST00000358894 PCDHA5Q9Y5H7 936 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 RFX5P48382 616 aaPredicted RBP13.92□□□□□ -0.18
COL20A1-201ENST00000358894 DNA2P51530 1060 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 SLC39A14Q15043 492 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 CCDC96Q2M329 555 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 FAM47AQ5JRC9 791 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 ZNF397Q8NF99 534 aaPredicted RBP13.92□□□□□ -0.18
COL20A1-201ENST00000358894 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
COL20A1-201ENST00000358894 POLR3EQ9NVU0 708 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 F8W031 263 aaPredicted RBP13.92□□□□□ -0.18
COL20A1-201ENST00000358894 CALM1P0DP23 149 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 CALM2P0DP24 149 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 CALM3P0DP25 149 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 TSGA10IPQ3SY00 556 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 TNKSO95271 1327 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 USP17L12C9JPN9 530 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 USP17L21D6R901 530 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 LDHCP07864 332 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 CCDC181Q5TID7 509 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 IQUBQ8NA54 791 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 FANCBQ8NB91 859 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 C8orf37Q96NL8 207 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 IMPACTQ9P2X3 320 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 CCDC175P0C221 793 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 TPTE2Q6XPS3 522 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 ZSWIM5Q9P217 1185 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 DENND2AQ9ULE3 1009 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 KCNQ4P56696 695 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 ERO1AQ96HE7 468 aa13.91□□□□□ -0.18
COL20A1-201ENST00000358894 TRIM21P19474 475 aaKnown RBP13.9□□□□□ -0.18
COL20A1-201ENST00000358894 CHRNDQ07001 517 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 GOLGA8FQ08AF8 430 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 GOLGA8DPQ0D2H9 430 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 FKBP15Q5T1M5 1219 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 VPS16Q9H269 839 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 TCEAL9Q9UHQ7 104 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 PXDNQ92626 1479 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 GNPATO15228 680 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 NAPAP54920 295 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 ADKP55263 362 aaKnown RBP13.9□□□□□ -0.18
COL20A1-201ENST00000358894 CCDC148Q8NFR7 591 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 CCDC43Q96MW1 224 aaKnown RBP13.9□□□□□ -0.18
COL20A1-201ENST00000358894 CTAGE1Q96RT6 745 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 C1orf167Q5SNV9 1468 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
COL20A1-201ENST00000358894 HIBADHP31937 336 aaKnown RBP13.9□□□□□ -0.18
COL20A1-201ENST00000358894 NR5A1Q13285 461 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 USPL1Q5W0Q7 1092 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 TBC1D10CQ8IV04 446 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 IGSF22Q8N9C0 903 aa13.9□□□□□ -0.18
COL20A1-201ENST00000358894 ANKRD26Q9UPS8 1709 aa13.9□□□□□ -0.19
COL20A1-201ENST00000358894 RASGRF1Q13972 1273 aa13.9□□□□□ -0.19
COL20A1-201ENST00000358894 SPA17Q15506 151 aa13.9□□□□□ -0.19
COL20A1-201ENST00000358894 TTC38Q5R3I4 469 aa13.9□□□□□ -0.19
COL20A1-201ENST00000358894 SMARCC2Q8TAQ2 1214 aa13.9□□□□□ -0.19
COL20A1-201ENST00000358894 CEP89Q96ST8 783 aa13.9□□□□□ -0.19
COL20A1-201ENST00000358894 CARD6Q9BX69 1037 aa13.9□□□□□ -0.19
COL20A1-201ENST00000358894 PUF60Q9UHX1 559 aaKnown RBP13.9□□□□□ -0.19
COL20A1-201ENST00000358894 UTYO14607 1347 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 KRBA2Q6ZNG9 492 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 LCORLQ8N3X6 602 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 MLKLQ8NB16 471 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 SAP30BPQ9UHR5 308 aaKnown RBP13.89□□□□□ -0.19
COL20A1-201ENST00000358894 SH2B2O14492 632 aaPredicted RBP13.89□□□□□ -0.19
COL20A1-201ENST00000358894 CALML3P27482 149 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 RBM6P78332 1123 aaKnown RBP13.89□□□□□ -0.19
COL20A1-201ENST00000358894 ASIC1P78348 528 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 GABPB1Q06547 395 aaPredicted RBP13.89□□□□□ -0.19
COL20A1-201ENST00000358894 CCDC144BQ3MJ40 725 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 CACNA2D4Q7Z3S7 1137 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 RMND1Q9NWS8 449 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 CTNND2Q9UQB3 1225 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 LDHBP07195 334 aaKnown RBP13.89□□□□□ -0.19
COL20A1-201ENST00000358894 ATP1A3P13637 1013 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 PICALMQ13492 652 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 CRACR2BQ8N4Y2 399 aaPredicted RBP13.89□□□□□ -0.19
COL20A1-201ENST00000358894 CALML4Q96GE6 196 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 BLZF1Q9H2G9 400 aa13.89□□□□□ -0.19
COL20A1-201ENST00000358894 SPAG1Q07617 926 aa13.88□□□□□ -0.19
COL20A1-201ENST00000358894 GRAMD1CQ8IYS0 662 aa13.88□□□□□ -0.19
COL20A1-201ENST00000358894 PYM1Q9BRP8 204 aaKnown RBP13.88□□□□□ -0.19
COL20A1-201ENST00000358894 ZNF219Q9P2Y4 722 aaPredicted RBP13.88□□□□□ -0.19
COL20A1-201ENST00000358894 AKR1B15C9JRZ8 316 aaPredicted RBP13.88□□□□□ -0.19
COL20A1-201ENST00000358894 CRKLP46109 303 aaKnown RBP13.88□□□□□ -0.19
COL20A1-201ENST00000358894 MCM6Q14566 821 aa13.88□□□□□ -0.19
COL20A1-201ENST00000358894 TMEM266Q2M3C6 531 aa13.88□□□□□ -0.19
COL20A1-201ENST00000358894 TDRD12Q587J7 1177 aaKnown RBP13.88□□□□□ -0.19
COL20A1-201ENST00000358894 ZNF569Q5MCW4 686 aa13.88□□□□□ -0.19
COL20A1-201ENST00000358894 DTHD1Q6ZMT9 781 aa13.88□□□□□ -0.19
COL20A1-201ENST00000358894 RBM28Q9NW13 759 aaKnown RBP13.88□□□□□ -0.19
COL20A1-201ENST00000358894 LOC102724428A0A0B4J2F2 783 aa13.88□□□□□ -0.19
COL20A1-201ENST00000358894 PSMA7O14818 248 aa13.88□□□□□ -0.19
COL20A1-201ENST00000358894 IL6STP40189 918 aaPredicted RBP13.88□□□□□ -0.19
COL20A1-201ENST00000358894 SIK1P57059 783 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms